prot_L-elsbetiae_contig7757.16701.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig7757.16701.1
Unique Nameprot_L-elsbetiae_contig7757.16701.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length60
Homology
BLAST of mRNA_L-elsbetiae_contig7757.16701.1 vs. uniprot
Match: A0A6H5JD21_9PHAE (Aa_trans domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JD21_9PHAE)

HSP 1 Score: 100 bits (249), Expect = 1.680e-23
Identity = 45/57 (78.95%), Postives = 54/57 (94.74%), Query Frame = 0
Query:    3 VHRVGWVGVDVSLFMSQLGYCVVYLIFVEQNLGPTLRRAFPSQPSWLTGTMALLLVQ 59
            V RVG+V VDVSLF+SQLGYCVVYLIFV+QN+GP+LR AFPSQP+WLTGTMAL+++Q
Sbjct:  124 VGRVGYVAVDVSLFLSQLGYCVVYLIFVQQNIGPSLREAFPSQPAWLTGTMALMVIQ 180          
BLAST of mRNA_L-elsbetiae_contig7757.16701.1 vs. uniprot
Match: D7FZM6_ECTSI (Aa_trans domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZM6_ECTSI)

HSP 1 Score: 100 bits (250), Expect = 1.950e-23
Identity = 45/57 (78.95%), Postives = 54/57 (94.74%), Query Frame = 0
Query:    3 VHRVGWVGVDVSLFMSQLGYCVVYLIFVEQNLGPTLRRAFPSQPSWLTGTMALLLVQ 59
            V RVG+V VDVSLF+SQLGYCVVYLIFV+QN+GP+LR AFPSQP+WLTGTMAL+++Q
Sbjct:  285 VGRVGYVAVDVSLFLSQLGYCVVYLIFVQQNIGPSLREAFPSQPAWLTGTMALMIIQ 341          
BLAST of mRNA_L-elsbetiae_contig7757.16701.1 vs. uniprot
Match: A0A662XSQ0_9STRA (Aa_trans domain-containing protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XSQ0_9STRA)

HSP 1 Score: 58.2 bits (139), Expect = 2.190e-8
Identity = 27/56 (48.21%), Postives = 39/56 (69.64%), Query Frame = 0
Query:    5 RVGWVGVDVSLFMSQLGYCVVYLIFVEQNLGPTLRRAFPSQPSWLTGTMALLLVQV 60
             VG V V+VSL +SQ+G+C  YLIFVE+N+G  +  AF  Q S +T +  L+L+Q+
Sbjct:  251 NVGRVAVNVSLVLSQIGFCCSYLIFVEKNIGEVMLHAFKFQKSMVTSSWTLILLQI 306          
BLAST of mRNA_L-elsbetiae_contig7757.16701.1 vs. uniprot
Match: A0A662XJ28_9STRA (Aa_trans domain-containing protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XJ28_9STRA)

HSP 1 Score: 58.2 bits (139), Expect = 2.190e-8
Identity = 27/56 (48.21%), Postives = 39/56 (69.64%), Query Frame = 0
Query:    5 RVGWVGVDVSLFMSQLGYCVVYLIFVEQNLGPTLRRAFPSQPSWLTGTMALLLVQV 60
             VG V V+VSL +SQ+G+C  YLIFVE+N+G  +  AF  Q S +T +  L+L+Q+
Sbjct:  243 NVGRVAVNVSLVLSQIGFCCSYLIFVEKNIGEVMLHAFKFQKSMVTSSWTLILLQI 298          
BLAST of mRNA_L-elsbetiae_contig7757.16701.1 vs. uniprot
Match: A0A225W8Q6_9STRA (Amino Acid/Auxin Permease n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225W8Q6_9STRA)

HSP 1 Score: 55.5 bits (132), Expect = 1.950e-7
Identity = 26/52 (50.00%), Postives = 37/52 (71.15%), Query Frame = 0
Query:    9 VGVDVSLFMSQLGYCVVYLIFVEQNLGPTLRRAFPSQPSWLTGTMALLLVQV 60
            V V+VSL +SQ+G+C  YLIFVE+N+G  L  AF  Q S+ T +  L+L+Q+
Sbjct:  243 VAVNVSLVLSQIGFCCSYLIFVEKNIGEVLFHAFNLQSSFTTSSWTLILLQI 294          
BLAST of mRNA_L-elsbetiae_contig7757.16701.1 vs. uniprot
Match: M4BRX0_HYAAE (Aa_trans domain-containing protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BRX0_HYAAE)

HSP 1 Score: 54.7 bits (130), Expect = 3.660e-7
Identity = 24/56 (42.86%), Postives = 40/56 (71.43%), Query Frame = 0
Query:    5 RVGWVGVDVSLFMSQLGYCVVYLIFVEQNLGPTLRRAFPSQPSWLTGTMALLLVQV 60
            +VG V V++SL +SQLG+C  YLIFVE+N+G  +  AF  Q +  + ++ L+++Q+
Sbjct:  234 KVGRVAVNISLVLSQLGFCCSYLIFVEKNIGEVILAAFGIQSTTASSSLTLIVLQI 289          
BLAST of mRNA_L-elsbetiae_contig7757.16701.1 vs. uniprot
Match: H3GRM9_PHYRM (Aa_trans domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GRM9_PHYRM)

HSP 1 Score: 54.3 bits (129), Expect = 5.000e-7
Identity = 23/56 (41.07%), Postives = 40/56 (71.43%), Query Frame = 0
Query:    5 RVGWVGVDVSLFMSQLGYCVVYLIFVEQNLGPTLRRAFPSQPSWLTGTMALLLVQV 60
            +VG V V++SL +SQ+G+C  YLIFVE+N+G  +  AF  Q +  + ++ L+++Q+
Sbjct:  236 KVGRVAVNISLVLSQIGFCCSYLIFVEKNIGEVILAAFNIQSTTASSSLTLIMLQI 291          
BLAST of mRNA_L-elsbetiae_contig7757.16701.1 vs. uniprot
Match: A0A3M6VUN4_9STRA (Aa_trans domain-containing protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VUN4_9STRA)

HSP 1 Score: 53.9 bits (128), Expect = 6.840e-7
Identity = 23/56 (41.07%), Postives = 40/56 (71.43%), Query Frame = 0
Query:    5 RVGWVGVDVSLFMSQLGYCVVYLIFVEQNLGPTLRRAFPSQPSWLTGTMALLLVQV 60
            +VG V V++SL +SQ+G+C  YLIFVE+N+G  +  AF  Q +  + ++ L+++Q+
Sbjct:  238 KVGRVAVNISLVLSQIGFCCSYLIFVEKNIGEVILAAFGIQRTTASSSLTLIMLQI 293          
BLAST of mRNA_L-elsbetiae_contig7757.16701.1 vs. uniprot
Match: A0A421G7L0_9STRA (Aa_trans domain-containing protein n=4 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A421G7L0_9STRA)

HSP 1 Score: 53.9 bits (128), Expect = 6.840e-7
Identity = 23/56 (41.07%), Postives = 40/56 (71.43%), Query Frame = 0
Query:    5 RVGWVGVDVSLFMSQLGYCVVYLIFVEQNLGPTLRRAFPSQPSWLTGTMALLLVQV 60
            ++G V V++SL +SQ+G+C  YLIFVE+N+G  +  AF  Q +  + ++ L+L+Q+
Sbjct:  238 KIGRVAVNISLVLSQVGFCCSYLIFVEKNIGEVILAAFNIQRTGASSSLTLILLQI 293          
BLAST of mRNA_L-elsbetiae_contig7757.16701.1 vs. uniprot
Match: A0A662XM46_9STRA (Aa_trans domain-containing protein (Fragment) n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XM46_9STRA)

HSP 1 Score: 53.1 bits (126), Expect = 1.270e-6
Identity = 24/56 (42.86%), Postives = 39/56 (69.64%), Query Frame = 0
Query:    5 RVGWVGVDVSLFMSQLGYCVVYLIFVEQNLGPTLRRAFPSQPSWLTGTMALLLVQV 60
            ++G V V+VSL +SQ+G+C  YLIFVE+N+G  +  AF  Q S  + ++ L+ +Q+
Sbjct:   95 KLGRVAVNVSLVLSQIGFCCSYLIFVEKNIGEVILAAFSIQRSGASSSITLIALQI 150          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig7757.16701.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 18
Match NameE-valueIdentityDescription
A0A6H5JD21_9PHAE1.680e-2378.95Aa_trans domain-containing protein n=1 Tax=Ectocar... [more]
D7FZM6_ECTSI1.950e-2378.95Aa_trans domain-containing protein n=1 Tax=Ectocar... [more]
A0A662XSQ0_9STRA2.190e-848.21Aa_trans domain-containing protein n=1 Tax=Nothoph... [more]
A0A662XJ28_9STRA2.190e-848.21Aa_trans domain-containing protein n=1 Tax=Nothoph... [more]
A0A225W8Q6_9STRA1.950e-750.00Amino Acid/Auxin Permease n=1 Tax=Phytophthora meg... [more]
M4BRX0_HYAAE3.660e-742.86Aa_trans domain-containing protein n=1 Tax=Hyalope... [more]
H3GRM9_PHYRM5.000e-741.07Aa_trans domain-containing protein n=1 Tax=Phytoph... [more]
A0A3M6VUN4_9STRA6.840e-741.07Aa_trans domain-containing protein n=1 Tax=Peronos... [more]
A0A421G7L0_9STRA6.840e-741.07Aa_trans domain-containing protein n=4 Tax=Phytoph... [more]
A0A662XM46_9STRA1.270e-642.86Aa_trans domain-containing protein (Fragment) n=1 ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 6..30
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 31..60
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..5
NoneNo IPR availableTMHMMTMhelixcoord: 7..29

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig7757contigL-elsbetiae_contig7757:116..295 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig7757.16701.1mRNA_L-elsbetiae_contig7757.16701.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig7757 116..295 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig7757.16701.1 ID=prot_L-elsbetiae_contig7757.16701.1|Name=mRNA_L-elsbetiae_contig7757.16701.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=60bp
MYVHRVGWVGVDVSLFMSQLGYCVVYLIFVEQNLGPTLRRAFPSQPSWLT
GTMALLLVQV
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