prot_L-elsbetiae_contig775.16693.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig775.16693.1
Unique Nameprot_L-elsbetiae_contig775.16693.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length189
Homology
BLAST of mRNA_L-elsbetiae_contig775.16693.1 vs. uniprot
Match: A0A835ZCK8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZCK8_9STRA)

HSP 1 Score: 225 bits (574), Expect = 7.930e-65
Identity = 119/180 (66.11%), Postives = 141/180 (78.33%), Query Frame = 0
Query:    3 KTRFTAADVRAMVRDLRSSVLGLRVANVYSLLDQKTVLLKLASPGQEKAMLLIESGVRFHTTKFTHEKSDMPSGFSMKLRKHIRTQRLEDVRQVGMDRVVDFKFGSGKASNHVILELYASGNIILTDFKYEILDLLRTHTYEGQXXXXXXXXXXXXXXXSDVRVAVRQIYPMELATTQEG 182
            K+RF+A DVRAMVRDLR+S LGLRV NVY L D KT L+KLA+PG+EKA+LL+ESG RFHTT+F+H+KSDMPS FSMKLRKHI+ +RLED+RQ+  DRVVDFKFGSG A+ H+ILELYASGNIILTD KYE+L LLRTH+Y                  +D  VAVRQIYP+  AT Q+G
Sbjct:    2 KSRFSATDVRAMVRDLRASSLGLRVINVYDL-DSKTFLIKLANPGREKAVLLLESGTRFHTTRFSHDKSDMPSAFSMKLRKHIKAKRLEDIRQLAFDRVVDFKFGSGDAACHIILELYASGNIILTDSKYEVLQLLRTHSY-----------------GADALVAVRQIYPVAHATAQDG 163          
BLAST of mRNA_L-elsbetiae_contig775.16693.1 vs. uniprot
Match: D8LHP2_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LHP2_ECTSI)

HSP 1 Score: 214 bits (546), Expect = 4.650e-61
Identity = 112/133 (84.21%), Postives = 114/133 (85.71%), Query Frame = 0
Query:   52 MLLIESGVRFHTTKFTHEKSDMPSGFSMKLRKHIRTQRLEDVRQVGMDRVVDFKFGSGKASNHVILELYASGNIILTDFKYEILDLLRTHTYEGQXXXXXXXXXXXXXXXSDVRVAVRQIYPMELATTQEGTT 184
            MLL+ESGVRFHTTKFTH KSDMPSGFSMKLRKHIRTQRLEDVRQVGMDRVVDFKFGSGKASNHVILELYASGNIILTD KYEILDLLRTH YEGQ                +VRVAVRQIYPMELATTQEGTT
Sbjct:    1 MLLLESGVRFHTTKFTHTKSDMPSGFSMKLRKHIRTQRLEDVRQVGMDRVVDFKFGSGKASNHVILELYASGNIILTDSKYEILDLLRTHIYEGQGGGAAGGSGATGGAGDNVRVAVRQIYPMELATTQEGTT 133          
BLAST of mRNA_L-elsbetiae_contig775.16693.1 vs. uniprot
Match: A0A6U1AHC6_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A6U1AHC6_9STRA)

HSP 1 Score: 193 bits (491), Expect = 1.140e-53
Identity = 101/179 (56.42%), Postives = 128/179 (71.51%), Query Frame = 0
Query:    1 MTKTRFTAADVRAMVRDLRSSVLGLRVANVYSLLDQKTVLLKLASPGQEKAMLLIESGVRFHTTKFTHEKSDMPSGFSMKLRKHIRTQRLEDVRQVGMDRVVDFKFGSGKASNHVILELYASGNIILTDFKYEILDLLRTHTYEGQXXXXXXXXXXXXXXXSDVRVAVRQIYPMELATT 179
            M K+RF+AADVRA VRDLR  VLG+R  NVY + D KT L KLA+PG EK +LL+ESGVRFH+T +  +K+DMPSGFSMKLRKHIR +RLE++ Q+G+DRVVDF+FGSG   +H+ILE+YA+GNIILTD  Y IL +LR+H ++                      AV Q+YP+  ATT
Sbjct:    1 MVKSRFSAADVRATVRDLRGRVLGMRCVNVYDI-DSKTYLFKLANPGTEKVVLLLESGVRFHSTSYARDKADMPSGFSMKLRKHIRAKRLENIAQLGIDRVVDFRFGSGTECHHIILEMYAAGNIILTDHSYSILAVLRSHKFD-----------------ETASTAVNQLYPIAHATT 161          
BLAST of mRNA_L-elsbetiae_contig775.16693.1 vs. uniprot
Match: A0A7S1UGR3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UGR3_9STRA)

HSP 1 Score: 176 bits (445), Expect = 4.370e-53
Identity = 90/145 (62.07%), Postives = 117/145 (80.69%), Query Frame = 0
Query:    1 MTKTRFTAADVRAMVRDLRSSVLGLRVANVYSLLDQKTVLLKLASPGQEKAMLLIESGVRFHTTKFTHEKSDMPSGFSMKLRKHIRTQRLEDVRQVGMDRVVDFKFGSGKASNHVILELYASGNIILTDFKYEILDLLRTHTYEG 145
            M + RF A+DVRAMVRDLRS +LG+RV+N+Y + + KT LLKLA PG+++ +LL+ESG RFH+T+F  +KS MPSGF+MKLRKH+RT+RLED+RQ+G DRVV F FG G+++N +ILELYA GNI+LT   + IL LLR H Y G
Sbjct:    1 MVRQRFDASDVRAMVRDLRSRLLGMRVSNIYDV-NAKTYLLKLAEPGRDREVLLLESGSRFHSTRFELDKSAMPSGFAMKLRKHLRTKRLEDLRQLGTDRVVVFTFGIGESTNCLILELYAQGNIVLTAPDFTILALLRVHDYAG 144          
BLAST of mRNA_L-elsbetiae_contig775.16693.1 vs. uniprot
Match: W7T3P9_9STRA (Fibronectin-binding A protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7T3P9_9STRA)

HSP 1 Score: 172 bits (436), Expect = 2.080e-51
Identity = 89/147 (60.54%), Postives = 113/147 (76.87%), Query Frame = 0
Query:    1 MTKTRFTAADVRAMVRDLRSSVLGLRVANVYSLLDQKTVLLKLASPGQEKAMLLIESGVRFHTTKFTHEKS---DMPSGFSMKLRKHIRTQRLEDVRQVGMDRVVDFKFGSGKASNHVILELYASGNIILTDFKYEILDLLRTHTYE 144
            M KT+FT  DVRAMVRDLR+ VLGL+V N+Y + D +T   KLA PG EK  LL+ESG RFHTT +  E+S   ++P+ F+MKLRK++R + LEDVRQ+GMDRVV F+FG G+ + H+ILELYASGN++LTD  Y IL LLRTH Y+
Sbjct:    1 MVKTKFTTPDVRAMVRDLRTKVLGLKVVNIYDI-DNRTYTFKLAVPGGEKVTLLLESGARFHTTAYARERSVPGELPNVFAMKLRKYLRGKGLEDVRQLGMDRVVVFRFGQGEGALHLILELYASGNLVLTDANYLILALLRTHQYD 146          
BLAST of mRNA_L-elsbetiae_contig775.16693.1 vs. uniprot
Match: K8Z908_NANGC (Zinc knuckle (Cchc-type) family protein (Fragment) n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=K8Z908_NANGC)

HSP 1 Score: 172 bits (436), Expect = 6.570e-49
Identity = 89/147 (60.54%), Postives = 113/147 (76.87%), Query Frame = 0
Query:    1 MTKTRFTAADVRAMVRDLRSSVLGLRVANVYSLLDQKTVLLKLASPGQEKAMLLIESGVRFHTTKFTHEKS---DMPSGFSMKLRKHIRTQRLEDVRQVGMDRVVDFKFGSGKASNHVILELYASGNIILTDFKYEILDLLRTHTYE 144
            M KT+FT  DVRAMVRDLR+ VLGL+V N+Y + D +T   KLA PG EK  LL+ESG RFHTT +  E+S   ++P+ F+MKLRK++R + LEDVRQ+GMDRVV F+FG G+ + H+ILELYASGN++LTD  Y IL LLRTH Y+
Sbjct:    1 MVKTKFTTPDVRAMVRDLRTKVLGLKVVNIYDI-DNRTYTFKLAVPGGEKVTLLLESGARFHTTAYARERSVPGELPNVFAMKLRKYLRGKGLEDVRQLGMDRVVVFRFGQGEGALHLILELYASGNLVLTDANYLILALLRTHQYD 146          
BLAST of mRNA_L-elsbetiae_contig775.16693.1 vs. uniprot
Match: C3Z3R8_BRAFL (Uncharacterized protein n=1 Tax=Branchiostoma floridae TaxID=7739 RepID=C3Z3R8_BRAFL)

HSP 1 Score: 163 bits (412), Expect = 5.310e-48
Identity = 91/175 (52.00%), Postives = 121/175 (69.14%), Query Frame = 0
Query:    3 KTRFTAADVRAMVRDLRSSVLGLRVANVYSLLDQKTVLLKLASPGQEKAMLLIESGVRFHTTKFTHEKSDMPSGFSMKLRKHIRTQRLEDVRQVGMDRVVDFKFGSGKASNHVILELYASGNIILTDFKYEILDLLRTHTYEGQXXXXXXXXXXXXXXXSDVRVAVRQIYPMELA 177
            K RF+  D+RA++ +++ SVLG+RVANVY + D KT L+KL     EK MLL+ESG R + T F   K+ MPSGFSMKLRKH+RT+RL  ++Q+G DR+VD +FG  +A+ H+I+ELY  GN+ILTD++Y IL+LLRT T EG                 DVR AVR+ YP+ELA
Sbjct:    2 KGRFSTVDLRAILTEIKDSVLGMRVANVYDI-DNKTYLIKLVKT-DEKKMLLLESGTRLYATSFDWPKNMMPSGFSMKLRKHLRTRRLISIQQLGSDRIVDMQFGENEAAYHLIVELYDRGNLILTDYEYTILNLLRTRT-EGD----------------DVRFAVREKYPLELA 157          
BLAST of mRNA_L-elsbetiae_contig775.16693.1 vs. uniprot
Match: A0A7S3J190_9SPIT (Hypothetical protein (Fragment) n=1 Tax=Euplotes harpa TaxID=151035 RepID=A0A7S3J190_9SPIT)

HSP 1 Score: 164 bits (414), Expect = 3.920e-47
Identity = 86/171 (50.29%), Postives = 113/171 (66.08%), Query Frame = 0
Query:    3 KTRFTAADVRAMVRDLRSSVLGLRVANVYSLLDQKTVLLKLASPGQEKAMLLIESGVRFHTTKFTHEKSDMPSGFSMKLRKHIRTQRLEDVRQVGMDRVVDFKFGSGKASNHVILELYASGNIILTDFKYEILDLLRTHTYEGQXXXXXXXXXXXXXXXSDVRVAVRQIYP 173
            K R TA D+RA+V  L+  ++ LRVAN+Y +   K  L KLA+ G  K  LLIE+G+R HTT F   K+ +PSGFSMKLRKH+RT+R+ED+RQVG+DRVVD   G G+A+ H+++E YASGN+ILTD  Y I+ LLRTH Y+                  D R AV ++YP
Sbjct:    6 KQRLTAIDIRALVMTLKRKIMSLRVANIYDI-SNKLYLFKLAAKGN-KEFLLIEAGIRMHTTGFVKNKNGIPSGFSMKLRKHLRTKRVEDIRQVGIDRVVDITLGQGEAAYHILIEFYASGNLILTDANYTIISLLRTHRYD-----------------EDTRCAVGEVYP 157          
BLAST of mRNA_L-elsbetiae_contig775.16693.1 vs. uniprot
Match: A0A8D0G7Y4_SPHPU (Nuclear export mediator factor n=2 Tax=Sauria TaxID=32561 RepID=A0A8D0G7Y4_SPHPU)

HSP 1 Score: 161 bits (407), Expect = 6.730e-47
Identity = 86/175 (49.14%), Postives = 125/175 (71.43%), Query Frame = 0
Query:    3 KTRFTAADVRAMVRDLRSSVLGLRVANVYSLLDQKTVLLKLASPGQEKAMLLIESGVRFHTTKFTHEKSDMPSGFSMKLRKHIRTQRLEDVRQVGMDRVVDFKFGSGKASNHVILELYASGNIILTDFKYEILDLLRTHTYEGQXXXXXXXXXXXXXXXSDVRVAVRQIYPMELA 177
            K+RF+  D+RA++ +LRSS+LG+RV NVY + D KT L++L  P   KA LL+ESG+R HTT+F   K+ MPSGF+MK RKH++++RL +V+Q+G+DR+VDF+FGS +A+ H+I+ELY  GNI+LTD++Y IL++LR  T E                  DV+ AVR+ YP++ A
Sbjct:    2 KSRFSTVDIRAVIAELRSSLLGMRVNNVYDV-DNKTYLIRLQKPDC-KATLLLESGIRIHTTEFEWPKNMMPSGFAMKCRKHLKSRRLVNVKQLGIDRIVDFQFGSDEAAYHLIIELYDRGNIVLTDYEYLILNILRFRTDEAD----------------DVKFAVRERYPVDNA 158          
BLAST of mRNA_L-elsbetiae_contig775.16693.1 vs. uniprot
Match: A0A4D9CTN6_9STRA (NFACT-R_1 domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CTN6_9STRA)

HSP 1 Score: 174 bits (440), Expect = 7.430e-47
Identity = 91/147 (61.90%), Postives = 113/147 (76.87%), Query Frame = 0
Query:    1 MTKTRFTAADVRAMVRDLRSSVLGLRVANVYSLLDQKTVLLKLASPGQEKAMLLIESGVRFHTTKFTHEKS---DMPSGFSMKLRKHIRTQRLEDVRQVGMDRVVDFKFGSGKASNHVILELYASGNIILTDFKYEILDLLRTHTYE 144
            M KT+FT  DVRAMVRDLR+ VLGL+V N+Y + D +T   KLA PG EK  LL+ESG RFHTT +  E+S   ++PS F+MKLRK++R + LEDVRQ+GMDRVV F+FG G+ + H+ILELYASGN++LTD  Y IL LLRTH YE
Sbjct:    1 MVKTKFTTPDVRAMVRDLRTRVLGLKVINIYDI-DNRTYTFKLAVPGGEKVTLLLESGARFHTTAYARERSVPGELPSVFAMKLRKYLRGKGLEDVRQLGMDRVVVFRFGQGEGALHLILELYASGNLVLTDANYLILALLRTHQYE 146          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig775.16693.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835ZCK8_9STRA7.930e-6566.11Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
D8LHP2_ECTSI4.650e-6184.21Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A6U1AHC6_9STRA1.140e-5356.42Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S1UGR3_9STRA4.370e-5362.07Hypothetical protein (Fragment) n=1 Tax=Phaeomonas... [more]
W7T3P9_9STRA2.080e-5160.54Fibronectin-binding A protein n=1 Tax=Nannochlorop... [more]
K8Z908_NANGC6.570e-4960.54Zinc knuckle (Cchc-type) family protein (Fragment)... [more]
C3Z3R8_BRAFL5.310e-4852.00Uncharacterized protein n=1 Tax=Branchiostoma flor... [more]
A0A7S3J190_9SPIT3.920e-4750.29Hypothetical protein (Fragment) n=1 Tax=Euplotes h... [more]
A0A8D0G7Y4_SPHPU6.730e-4749.14Nuclear export mediator factor n=2 Tax=Sauria TaxI... [more]
A0A4D9CTN6_9STRA7.430e-4761.90NFACT-R_1 domain-containing protein n=2 Tax=Monodo... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D2.30.310.10coord: 6..149
e-value: 1.6E-22
score: 82.0
NoneNo IPR availablePFAMPF05833FbpAcoord: 8..142
e-value: 2.1E-26
score: 92.7
NoneNo IPR availablePANTHERPTHR15239UNCHARACTERIZEDcoord: 1..184
NoneNo IPR availablePANTHERPTHR15239:SF6NUCLEAR EXPORT MEDIATOR FACTOR NEMFcoord: 1..184

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig775contigL-elsbetiae_contig775:21939..24627 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig775.16693.1mRNA_L-elsbetiae_contig775.16693.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig775 21917..24627 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig775.16693.1 ID=prot_L-elsbetiae_contig775.16693.1|Name=mRNA_L-elsbetiae_contig775.16693.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=189bp
MTKTRFTAADVRAMVRDLRSSVLGLRVANVYSLLDQKTVLLKLASPGQEK
AMLLIESGVRFHTTKFTHEKSDMPSGFSMKLRKHIRTQRLEDVRQVGMDR
VVDFKFGSGKASNHVILELYASGNIILTDFKYEILDLLRTHTYEGQGDAV
AVAGGGGGGGGSDVRVAVRQIYPMELATTQEGTTTTAAA
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