prot_L-elsbetiae_contig7729.16677.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig7729.16677.1
Unique Nameprot_L-elsbetiae_contig7729.16677.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length441
Homology
BLAST of mRNA_L-elsbetiae_contig7729.16677.1 vs. uniprot
Match: D8LLH4_ECTSI (Protein ARV n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LLH4_ECTSI)

HSP 1 Score: 291 bits (746), Expect = 2.990e-91
Identity = 304/441 (68.93%), Postives = 311/441 (70.52%), Query Frame = 0
Query:    1 MAGGSSTETVSMKGSVSVAEQXXXXXXXXXM-APSLVCVECGRPVALLFREYNRGNIRLGRCSYCRSVADKYIEWEFVLIAIDLVLHRVQAYRHLLFNMKPFSTHSFHGRLWQLGVAMAALDAHLRRTALSSEASTTPAXXXXXXXXXXGGAGDPFWEAGGLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDSGGVPRATKMYMAVVYPLFFRLLAAFVMIWDRQVAILNTIELLVATMQFVALSAVVGGPAAVSGMGEGGVAATAIVAGLTSKMAARAVLCFWFGSDPRTLRML 440
            MA GSS ET+SMKGS S+AEQXXXXXXXXX  A   VCVECGRPVALLFREYN+GNIRLGRCSYCRSVADKYIEWEFVLIAIDL LHRVQAYRHLLFNM+PFSTHSF GRLWQLGV MAALDAHLR TALSSEA     XXXX                   XXXXXXXXXXXXXXXXXXXXXXXX                      XXXXXXXXXXXX                          XXXXXXXXXXXXX           XXXXXXXXXXXXXXXXXXXXXXXXXX                      XXXXXXXXXXX   XXXXX      RA KMYMAVVYPLFFRLLAAFVMIWDRQVAILNTIELLVATMQFVALSAVVGGPAAVSGMGEGGVAA +++AGL SKMAARAVLC WFGSDPRTLRML
Sbjct:    1 MAVGSSAETMSMKGSASLAEQXXXXXXXXXXXARPFVCVECGRPVALLFREYNKGNIRLGRCSYCRSVADKYIEWEFVLIAIDLALHRVQAYRHLLFNMRPFSTHSFRGRLWQLGVGMAALDAHLRHTALSSEAXXXXXXXXX------------------XXXXXXXXXXXXXXXXXXXXXXXXXVEHACFAAGAVLFATSRVRAAAXXXXXXXXXXXXQTGRRSTRSTGTINGGRQEEDWDEYGXXXXXXXXXXXXXEWRSSGDVGGTXXXXXXXXXXXXXXXXXXXXXXXXXXYESSSSYSLPPPRPDSSSTIPSXXXXXXXXXXXPLCXXXXXXXXXXXRAAKMYMAVVYPLFFRLLAAFVMIWDRQVAILNTIELLVATMQFVALSAVVGGPAAVSGMGEGGVAAMSVLAGLASKMAARAVLCLWFGSDPRTLRML 423          
BLAST of mRNA_L-elsbetiae_contig7729.16677.1 vs. uniprot
Match: A0A7S1CNP5_9STRA (Protein ARV (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CNP5_9STRA)

HSP 1 Score: 107 bits (267), Expect = 1.720e-24
Identity = 46/88 (52.27%), Postives = 65/88 (73.86%), Query Frame = 0
Query:   34 SLVCVECGRPVALLFREYNRGNIRLGRCSYCRSVADKYIEWEFVLIAIDLVLHRVQAYRHLLFNMKPFSTHSFHGRLWQLGVAMAALD 121
            +++CV CGR ++ +FREY++GNIRL RC +C++VADKYIE+E VLIAID+VLHR+  YRHLLFN   +  H     +  + +A+  LD
Sbjct:   14 AMICVVCGRSLSHVFREYSKGNIRLSRCDHCKNVADKYIEYELVLIAIDMVLHRISVYRHLLFNRLEYQEHGVPRPIVMIAIAILCLD 101          
BLAST of mRNA_L-elsbetiae_contig7729.16677.1 vs. uniprot
Match: A0A836DLE2_9ROSI (Protein ARV n=1 Tax=Salix suchowensis TaxID=1278906 RepID=A0A836DLE2_9ROSI)

HSP 1 Score: 103 bits (256), Expect = 6.940e-22
Identity = 48/87 (55.17%), Postives = 64/87 (73.56%), Query Frame = 0
Query:   37 CVECGRPVALLFREYNRGNIRLGRCSYCRSVADKYIEWEFVLIAIDLVLHRVQAYRHLLFNMKPFSTHSFHGRLWQLGVAMAALDAH 123
            CVECG P+  LF +Y+ GNIRL RC  C++VAD+YIE EF++I+IDL+LH+ +AYRHLLFN+    T +F G LW+   A   LDA+
Sbjct:   16 CVECGFPIKTLFVQYSPGNIRLMRCENCKAVADEYIECEFMIISIDLILHKTKAYRHLLFNVINQHTVNFEGSLWKSIFAFLLLDAY 102          
BLAST of mRNA_L-elsbetiae_contig7729.16677.1 vs. uniprot
Match: A0A3N7FYG6_POPTR (Protein ARV n=7 Tax=Populus TaxID=3689 RepID=A0A3N7FYG6_POPTR)

HSP 1 Score: 102 bits (254), Expect = 9.850e-22
Identity = 48/87 (55.17%), Postives = 63/87 (72.41%), Query Frame = 0
Query:   37 CVECGRPVALLFREYNRGNIRLGRCSYCRSVADKYIEWEFVLIAIDLVLHRVQAYRHLLFNMKPFSTHSFHGRLWQLGVAMAALDAH 123
            CVECG P+  LF +Y+ GNIRL RC  C++VAD+YIE EF++I IDL+LH+ +AYRHLLFN+    T +F G LW+   A   LDA+
Sbjct:    5 CVECGFPIKTLFVQYSPGNIRLMRCENCKAVADEYIECEFMIILIDLILHKTKAYRHLLFNVINQHTVNFEGSLWKSIFAFLLLDAY 91          
BLAST of mRNA_L-elsbetiae_contig7729.16677.1 vs. uniprot
Match: A0A3N7G147_POPTR (Protein ARV n=9 Tax=Populus TaxID=3689 RepID=A0A3N7G147_POPTR)

HSP 1 Score: 102 bits (254), Expect = 2.190e-21
Identity = 48/87 (55.17%), Postives = 63/87 (72.41%), Query Frame = 0
Query:   37 CVECGRPVALLFREYNRGNIRLGRCSYCRSVADKYIEWEFVLIAIDLVLHRVQAYRHLLFNMKPFSTHSFHGRLWQLGVAMAALDAH 123
            CVECG P+  LF +Y+ GNIRL RC  C++VAD+YIE EF++I IDL+LH+ +AYRHLLFN+    T +F G LW+   A   LDA+
Sbjct:    5 CVECGFPIKTLFVQYSPGNIRLMRCENCKAVADEYIECEFMIILIDLILHKTKAYRHLLFNVINQHTVNFEGSLWKSIFAFLLLDAY 91          
BLAST of mRNA_L-elsbetiae_contig7729.16677.1 vs. uniprot
Match: A0A2P2MPP1_RHIMU (Protein ARV n=1 Tax=Rhizophora mucronata TaxID=61149 RepID=A0A2P2MPP1_RHIMU)

HSP 1 Score: 96.7 bits (239), Expect = 3.620e-20
Identity = 44/87 (50.57%), Postives = 62/87 (71.26%), Query Frame = 0
Query:   37 CVECGRPVALLFREYNRGNIRLGRCSYCRSVADKYIEWEFVLIAIDLVLHRVQAYRHLLFNMKPFSTHSFHGRLWQLGVAMAALDAH 123
            CV+CG  +  LF +Y+ GNIRL +C  C++VAD+YIE EF++I IDL+LH+ QAYRHLL+N+    T +F G LW+  +    LDA+
Sbjct:    6 CVKCGFRIKTLFVQYSPGNIRLMKCENCKAVADEYIECEFMIILIDLILHKPQAYRHLLYNVLFQETVNFQGLLWKSTIGFLVLDAY 92          
BLAST of mRNA_L-elsbetiae_contig7729.16677.1 vs. uniprot
Match: A0A1Y2GYY3_9FUNG (Protein ARV n=1 Tax=Lobosporangium transversale TaxID=64571 RepID=A0A1Y2GYY3_9FUNG)

HSP 1 Score: 99.0 bits (245), Expect = 4.750e-20
Identity = 43/98 (43.88%), Postives = 65/98 (66.33%), Query Frame = 0
Query:   36 VCVECGRPVALLFREYNRGNIRLGRCSYCRSVADKYIEWEFVLIAIDLVLHRVQAYRHLLFNMKPFSTHSFHGRLWQLGVAMAALDAHLRRTALSSEA 133
            +CVECG  V+ L+ EY++GNIRL  C +C+ +ADKY+E +FV+I +D+VLH+   YRHLLFN  P+        +++LGV +   D +++   L  EA
Sbjct:    3 ICVECGAAVSSLYTEYSKGNIRLTYCEHCKKLADKYVEHDFVIIFVDMVLHKKPVYRHLLFNRLPYRDLGIDPNVFKLGVLLILFDVYIKWFRLEQEA 100          
BLAST of mRNA_L-elsbetiae_contig7729.16677.1 vs. uniprot
Match: A0A2I1G244_9GLOM (Protein ARV n=12 Tax=Glomeraceae TaxID=36751 RepID=A0A2I1G244_9GLOM)

HSP 1 Score: 97.8 bits (242), Expect = 4.810e-20
Identity = 41/89 (46.07%), Postives = 60/89 (67.42%), Query Frame = 0
Query:   37 CVECGRPVALLFREYNRGNIRLGRCSYCRSVADKYIEWEFVLIAIDLVLHRVQAYRHLLFNMKPFSTHSFHGRLWQLGVAMAALDAHLR 125
            CVECG PV  L+ EY++GNIRL  C  C+  ADKY+E +FV+I ID++LH+ Q YRHLLFN   +  H     +++LG+ +   D +++
Sbjct:    4 CVECGAPVTNLYTEYSKGNIRLTPCEKCKKFADKYVEHDFVIIFIDMLLHKPQVYRHLLFNRLEYRDHGIDPNVFKLGILLILFDVYIK 92          
BLAST of mRNA_L-elsbetiae_contig7729.16677.1 vs. uniprot
Match: W7TPQ8_9STRA (Protein ARV n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TPQ8_9STRA)

HSP 1 Score: 100 bits (248), Expect = 8.090e-20
Identity = 44/103 (42.72%), Postives = 71/103 (68.93%), Query Frame = 0
Query:   36 VCVECGRPVAL-LFREYNRGNIRLGRCSYCRSVADKYIEWEFVLIAIDLVLHRVQAYRHLLFNMKPFSTHSFHGRLWQLGVAMAALDAHLRRTALSSEASTTP 137
            +C+ECG+PV   L+REY++ NIRL RC +C +VAD+ IE+E VL+ +DL LHR+ A+RH+LFN +P +   F  +LW++ + +  +D H++       +S +P
Sbjct:   45 LCIECGKPVTEGLYREYSKDNIRLSRCEFCGAVADRLIEYELVLVGLDLALHRLPAWRHILFNRQPHAKLEF-AQLWRMALVLTLVDTHIKYAIYVHYSSISP 146          
BLAST of mRNA_L-elsbetiae_contig7729.16677.1 vs. uniprot
Match: A0A4P9XR67_9FUNG (Protein ARV n=1 Tax=Thamnocephalis sphaerospora TaxID=78915 RepID=A0A4P9XR67_9FUNG)

HSP 1 Score: 97.8 bits (242), Expect = 1.180e-19
Identity = 44/91 (48.35%), Postives = 60/91 (65.93%), Query Frame = 0
Query:   35 LVCVECGRPVALLFREYNRGNIRLGRCSYCRSVADKYIEWEFVLIAIDLVLHRVQAYRHLLFNMKPFSTHSFHGRLWQLGVAMAALDAHLR 125
            ++CVECGRPV  L+ EY++GNIRL  C  C    DKY+E +FV+I IDL+LH+ Q YRHLLFN   +    FH  + +L V +   D ++R
Sbjct:    1 MLCVECGRPVNTLYTEYSKGNIRLTPCDACGRFVDKYVELDFVVIFIDLLLHKPQVYRHLLFNRLEYYDKGFHPSVAKLAVLLVLFDVYIR 91          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig7729.16677.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LLH4_ECTSI2.990e-9168.93Protein ARV n=2 Tax=Ectocarpus TaxID=2879 RepID=D8... [more]
A0A7S1CNP5_9STRA1.720e-2452.27Protein ARV (Fragment) n=1 Tax=Bicosoecida sp. CB-... [more]
A0A836DLE2_9ROSI6.940e-2255.17Protein ARV n=1 Tax=Salix suchowensis TaxID=127890... [more]
A0A3N7FYG6_POPTR9.850e-2255.17Protein ARV n=7 Tax=Populus TaxID=3689 RepID=A0A3N... [more]
A0A3N7G147_POPTR2.190e-2155.17Protein ARV n=9 Tax=Populus TaxID=3689 RepID=A0A3N... [more]
A0A2P2MPP1_RHIMU3.620e-2050.57Protein ARV n=1 Tax=Rhizophora mucronata TaxID=611... [more]
A0A1Y2GYY3_9FUNG4.750e-2043.88Protein ARV n=1 Tax=Lobosporangium transversale Ta... [more]
A0A2I1G244_9GLOM4.810e-2046.07Protein ARV n=12 Tax=Glomeraceae TaxID=36751 RepID... [more]
W7TPQ8_9STRA8.090e-2042.72Protein ARV n=1 Tax=Nannochloropsis gaditana TaxID... [more]
A0A4P9XR67_9FUNG1.180e-1948.35Protein ARV n=1 Tax=Thamnocephalis sphaerospora Ta... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007290Arv1 proteinPFAMPF04161Arv1coord: 36..138
e-value: 4.8E-31
score: 108.6
IPR007290Arv1 proteinPANTHERPTHR14467ARV1coord: 35..409
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 405..430
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 400..404
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 368..378
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..346
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 431..440
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 347..367
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 379..399
NoneNo IPR availableTMHMMTMhelixcoord: 310..332
NoneNo IPR availableTMHMMTMhelixcoord: 408..430
NoneNo IPR availableTMHMMTMhelixcoord: 347..366
NoneNo IPR availableTMHMMTMhelixcoord: 371..393
NoneNo IPR availableTMHMMTMhelixcoord: 160..182

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig7729contigL-elsbetiae_contig7729:1949..7212 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig7729.16677.1mRNA_L-elsbetiae_contig7729.16677.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig7729 1892..7212 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig7729.16677.1 ID=prot_L-elsbetiae_contig7729.16677.1|Name=mRNA_L-elsbetiae_contig7729.16677.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=441bp
MAGGSSTETVSMKGSVSVAEQQQQAAAAAAMAPSLVCVECGRPVALLFRE
YNRGNIRLGRCSYCRSVADKYIEWEFVLIAIDLVLHRVQAYRHLLFNMKP
FSTHSFHGRLWQLGVAMAALDAHLRRTALSSEASTTPAAADAAADAARGG
AGDPFWEAGGLLLAAVVEHACFASGVVVFAAGRMRAAGAVRARRRNGSRR
SGGGGGRRRNRGGNADDGRQETEEEEEEEEGYDGGGGGGGVGAEWRSGGV
DGGGQQQPPGDHHHPPAAAAAADAEQEYEDDDGYESSSSSSSYALPPPRA
RAAAARSESSATVASAPSAATAATAAAAAAAAGSPDDSGGVPRATKMYMA
VVYPLFFRLLAAFVMIWDRQVAILNTIELLVATMQFVALSAVVGGPAAVS
GMGEGGVAATAIVAGLTSKMAARAVLCFWFGSDPRTLRML*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007290Arv1