prot_L-elsbetiae_contig772.16667.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig772.16667.1
Unique Nameprot_L-elsbetiae_contig772.16667.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length494
Homology
BLAST of mRNA_L-elsbetiae_contig772.16667.1 vs. uniprot
Match: D7FGZ9_ECTSI (DNA repair protein RAD52 homolog n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FGZ9_ECTSI)

HSP 1 Score: 311 bits (797), Expect = 2.270e-96
Identity = 151/191 (79.06%), Postives = 172/191 (90.05%), Query Frame = 0
Query:    1 MEPASYNSERHVASGQGGQWVFGTDRFTDEDNARIQEALNAALNWNQISSRPGGGGKKVSYLAGHTVFENANNVFGFAGWDSSILHLSVDYVEKSDDGRHWMASATAIVRVALANGCGHEDVGNAHLKDRDKGEVLQRVKKAAVTDAKKRALRLFGTQLGMSMSDKEGLKDAERTHKQNQKELRANQERDA 191
            MEP SYN+ER  ASGQG QW+FGTD+F+DED+ARIQ+ALN AL+W+QI+SRPGGGGKKV YLAGHTV ENAN VFGFAGWDSSILHLS+DY  KS+DGR WMA ATAIVR+ +ANGCGHEDVGN+H+KD+DKGEVL RVKKAAVTDAKKRALRLFGTQLG  M DKEGLK+ E THKQNQ+EL+ANQ+R+A
Sbjct:    1 MEPTSYNAERQGASGQGAQWIFGTDKFSDEDHARIQQALNTALSWDQINSRPGGGGKKVPYLAGHTVIENANKVFGFAGWDSSILHLSLDY--KSEDGRFWMAGATAIVRITVANGCGHEDVGNSHMKDKDKGEVLSRVKKAAVTDAKKRALRLFGTQLGSQMMDKEGLKETEITHKQNQRELKANQQREA 189          
BLAST of mRNA_L-elsbetiae_contig772.16667.1 vs. uniprot
Match: A0A6H5K4D8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4D8_9PHAE)

HSP 1 Score: 164 bits (415), Expect = 3.710e-45
Identity = 74/92 (80.43%), Postives = 83/92 (90.22%), Query Frame = 0
Query:    1 MEPASYNSERHVASGQGGQWVFGTDRFTDEDNARIQEALNAALNWNQISSRPGGGGKKVSYLAGHTVFENANNVFGFAGWDSSILHLSVDYV 92
            MEP SYN+ER   SGQG QW+FGTD+F+DED+ARIQEALN AL+W+QI+SRPGGGGKKV YLAGHTV ENAN VFGFAGWDSSILHLS+DYV
Sbjct:    1 MEPTSYNAERQGTSGQGAQWIFGTDKFSDEDHARIQEALNTALSWDQINSRPGGGGKKVPYLAGHTVIENANKVFGFAGWDSSILHLSLDYV 92          
BLAST of mRNA_L-elsbetiae_contig772.16667.1 vs. uniprot
Match: A0A6H5JZ89_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZ89_9PHAE)

HSP 1 Score: 162 bits (409), Expect = 7.850e-41
Identity = 80/100 (80.00%), Postives = 92/100 (92.00%), Query Frame = 0
Query:   92 VEKSDDGRHWMASATAIVRVALANGCGHEDVGNAHLKDRDKGEVLQRVKKAAVTDAKKRALRLFGTQLGMSMSDKEGLKDAERTHKQNQKELRANQERDA 191
            +EKS+DGR WMA ATAIVR+ +ANGCGHEDVGN+H+KDRDKGEVL RVKKAAVTDAKKRALRLFGTQLG  M+DKEGLK+ E THKQNQ+EL+ANQ+R+A
Sbjct:    7 LEKSEDGRFWMAGATAIVRITVANGCGHEDVGNSHMKDRDKGEVLSRVKKAAVTDAKKRALRLFGTQLGSQMTDKEGLKETEITHKQNQRELKANQQREA 106          
BLAST of mRNA_L-elsbetiae_contig772.16667.1 vs. uniprot
Match: UPI000644DBF2 (hypothetical protein n=1 Tax=Acytostelium subglobosum LB1 TaxID=1410327 RepID=UPI000644DBF2)

HSP 1 Score: 122 bits (307), Expect = 6.540e-29
Identity = 63/150 (42.00%), Postives = 94/150 (62.67%), Query Frame = 0
Query:   21 VFGTDRFTDEDNARIQEALNAALNWNQISSRPGGGGKKVSYLAGHTVFENANNVFGFAGWDSSILHLSVDYVEKSDDGRHWMASATAIVRVALANGCGHEDVGNAHLKDRDKGEVLQRVKKAAVTDAKKRALRLFGTQLGMSMSDKEGLK 170
            +FG + +T E+  R+   L+  L  +  S RPG GG +++YL      E AN VFGF GW S I+ L++D+ E +  G+ W A A+AI+R+ L +G  H+DVG    +D +KG  ++  KK AV+DA+KR+LR+FG  LG  + DK+ LK
Sbjct:    8 LFGNESYTQEEIERLAIELSTPLPRDDQSERPGPGGTRLTYLESWKAIEIANRVFGFNGWSSRIVELTLDFCEVAPSGK-WRAGASAIIRIMLKDGTFHDDVGFGMREDSNKGTSIEHAKKEAVSDARKRSLRVFGNALGNKLYDKDPLK 156          
BLAST of mRNA_L-elsbetiae_contig772.16667.1 vs. uniprot
Match: W4GII7_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GII7_9STRA)

HSP 1 Score: 126 bits (317), Expect = 4.050e-28
Identity = 69/152 (45.39%), Postives = 92/152 (60.53%), Query Frame = 0
Query:   21 VFGTDRFTDEDNARIQEALNAALNWNQISSRPGGGGKKVSYLAGHTVFENANNVFGFAGWDSSILHLSVDYVEKSDDGRHWMASATAIVRVALANGCGHEDVGNAHLKD-RDKGEVLQRVKKAAVTDAKKRALRLFGTQLGMSMSDKEGLKD 171
            +FGT  F  +D  R    L   LN N +S RPG GG++++YL      E AN  FGF GW   I+  +V+  EKSDDGR W    +++VR+ L +G  HEDVG       +D G  L++ KKA+++DA+KRALRLFG  LG S  DKE +KD
Sbjct:   10 IFGTIPFNPDDQQRTDAYLRQKLNSNVLSRRPGPGGRRLTYLESCKAIEIANEAFGFNGWSCRIIDCNVECKEKSDDGR-WSIIYSSVVRIELKDGSSHEDVGFGTSDGMKDLGAALEQAKKASISDARKRALRLFGEYLGNSCYDKEHIKD 160          
BLAST of mRNA_L-elsbetiae_contig772.16667.1 vs. uniprot
Match: A0A166WH72_9AGAM (Recombination protein Rad52 (Fragment) n=1 Tax=Fibularhizoctonia sp. CBS 109695 TaxID=436010 RepID=A0A166WH72_9AGAM)

HSP 1 Score: 119 bits (298), Expect = 5.760e-28
Identity = 67/157 (42.68%), Postives = 90/157 (57.32%), Query Frame = 0
Query:   21 VFGTDRFTDEDNA----------RIQEALNAALNWNQISSRPGGGGKKVSYLAGHTVFENANNVFGFAGWDSSILHLSVDYVEKSDDGRHWMASATAIVRVALANGCGHEDVGNAHLKD-RDKGEVLQRVKKAAVTDAKKRALRLFGTQLGMSMSDK 166
            + GT  F +E             R+Q  LN  L    IS RPG GG+K++Y  G  +   AN VFGF GW SSI++LS+D  + +++ R W    +AIVRV L +G  HED+G   L++ + KG  L + KK AVTDA KRALR FG  +G  + DK
Sbjct:    1 MHGTPSFNNESQGTSEETLLRIHRLQAKLNQKLGPEYISQRPGPGGQKLTYAEGWKIINLANEVFGFNGWSSSIVNLSIDTTDFNEESRKWSVGVSAIVRVTLRDGTFHEDIGYGILENSKTKGPALDKCKKEAVTDALKRALRNFGNLMGNCLYDK 157          
BLAST of mRNA_L-elsbetiae_contig772.16667.1 vs. uniprot
Match: A0A6G0WS50_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WS50_9STRA)

HSP 1 Score: 124 bits (311), Expect = 1.370e-27
Identity = 67/152 (44.08%), Postives = 93/152 (61.18%), Query Frame = 0
Query:   21 VFGTDRFTDEDNARIQEALNAALNWNQISSRPGGGGKKVSYLAGHTVFENANNVFGFAGWDSSILHLSVDYVEKSDDGRHWMASATAIVRVALANGCGHEDVGNAHLKD-RDKGEVLQRVKKAAVTDAKKRALRLFGTQLGMSMSDKEGLKD 171
            +FG   F++E+  R +  L   LN N +S RPG GG++++YL      E AN  FGF GW   I+  +V+  EK D+GR W    +A+VR+ L +G  HEDVG       +D G  L++ KKA+++DA+KRALRLFG  LG S  DKE +KD
Sbjct:    9 IFGNIAFSEEEQQRTEAYLRQKLNSNFLSRRPGPGGRRLTYLESCKAIEIANEAFGFNGWSCRIVDCNVECKEKDDNGR-WSVIYSAVVRIELKDGACHEDVGFGQSDGLKDLGAALEQAKKASISDARKRALRLFGEYLGNSCYDKEHIKD 159          
BLAST of mRNA_L-elsbetiae_contig772.16667.1 vs. uniprot
Match: A0A024THR9_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024THR9_9STRA)

HSP 1 Score: 124 bits (311), Expect = 2.090e-27
Identity = 66/152 (43.42%), Postives = 93/152 (61.18%), Query Frame = 0
Query:   21 VFGTDRFTDEDNARIQEALNAALNWNQISSRPGGGGKKVSYLAGHTVFENANNVFGFAGWDSSILHLSVDYVEKSDDGRHWMASATAIVRVALANGCGHEDVGNAHLKD-RDKGEVLQRVKKAAVTDAKKRALRLFGTQLGMSMSDKEGLKD 171
            +FG+  F  +D  R    L   LN N +S RPG GG++++YL      E AN  FGF GW   I+  +V+  EK+DDG+ W    +++VR+ L +G  HEDVG    +  +D G  L++ KKA+++DA+KRALRLFG  LG S  DKE +KD
Sbjct:   10 IFGSVPFNPDDQQRTDAYLRQKLNANFLSRRPGPGGRRLTYLESCKAIEIANEAFGFNGWSCRIVDCNVECKEKTDDGK-WTVIYSSVVRIELKDGASHEDVGFGQSEGMKDLGAALEQAKKASISDARKRALRLFGEYLGNSCYDKEHIKD 160          
BLAST of mRNA_L-elsbetiae_contig772.16667.1 vs. uniprot
Match: A0A2P6NIG4_9EUKA (Uncharacterized protein n=1 Tax=Planoprotostelium fungivorum TaxID=1890364 RepID=A0A2P6NIG4_9EUKA)

HSP 1 Score: 119 bits (299), Expect = 4.220e-27
Identity = 64/160 (40.00%), Postives = 95/160 (59.38%), Query Frame = 0
Query:   21 VFGTDRFTDEDNARIQEALNAALNWNQISSRPGGGGKKVSYLAGHTVFENANNVFGFAGWDSSILHLSVDYVEKSDDGRHWMASATAIVRVALANGCGHEDVGNAHLKDRDKGEVLQRVKKAAVTDAKKRALRLFGTQLGMSMSDKEGLKDAERTHKQNQ 180
             FG   +T+E+ + I   L   L  N+++ R G G + V YL      E AN +FG+ GW SS+++LS D++E   +G+ +    +A+VRV L +G  HEDVG     +  KG  +++ KK A++DA KRALRLFG +LG S+ DKE +K  +   K NQ
Sbjct:   12 TFGELEYTNEEKSAIGNILEQKLGANEVAFRTGAGSQSVGYLEAWRAIELANEIFGYDGWSSSVINLSQDFLE--GEGQRFSCGISAVVRVQLKDGSFHEDVGYGTADNMKKGLAIEKAKKEAISDALKRALRLFGNRLGNSVYDKEHMKANQAQQKANQ 169          
BLAST of mRNA_L-elsbetiae_contig772.16667.1 vs. uniprot
Match: A0A067CCG8_SAPPC (Uncharacterized protein n=1 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067CCG8_SAPPC)

HSP 1 Score: 122 bits (306), Expect = 4.370e-27
Identity = 67/161 (41.61%), Postives = 97/161 (60.25%), Query Frame = 0
Query:   12 VASGQGGQWVFGTDRFTDEDNARIQEALNAALNWNQISSRPGGGGKKVSYLAGHTVFENANNVFGFAGWDSSILHLSVDYVEKSDDGRHWMASATAIVRVALANGCGHEDVGNAHLKD-RDKGEVLQRVKKAAVTDAKKRALRLFGTQLGMSMSDKEGLKD 171
            +A+G+    +FGT  FT ++  R    L   LN + +S RPG GG++++YL      E AN  FGF GW   I+  +++Y EK  +GR W    +A+VR+ L +G  HEDVG       ++ G  L++ KKA+++DA+KRALRLFG  LG S  DKE +KD
Sbjct:    1 MAAGKRSDCLFGTLPFTSDEQQRTDAYLRQKLNTDVLSRRPGPGGRRLTYLESCKAIEIANEAFGFNGWSCRIVDCNLEYKEKDGNGR-WSVGYSAVVRIELKDGSTHEDVGFGTSDGMKELGAALEQSKKASISDARKRALRLFGEYLGNSCYDKEHIKD 160          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig772.16667.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FGZ9_ECTSI2.270e-9679.06DNA repair protein RAD52 homolog n=1 Tax=Ectocarpu... [more]
A0A6H5K4D8_9PHAE3.710e-4580.43Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JZ89_9PHAE7.850e-4180.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
UPI000644DBF26.540e-2942.00hypothetical protein n=1 Tax=Acytostelium subglobo... [more]
W4GII7_9STRA4.050e-2845.39Uncharacterized protein n=2 Tax=Aphanomyces astaci... [more]
A0A166WH72_9AGAM5.760e-2842.68Recombination protein Rad52 (Fragment) n=1 Tax=Fib... [more]
A0A6G0WS50_9STRA1.370e-2744.08Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]
A0A024THR9_9STRA2.090e-2743.42Uncharacterized protein n=1 Tax=Aphanomyces invada... [more]
A0A2P6NIG4_9EUKA4.220e-2740.00Uncharacterized protein n=1 Tax=Planoprotostelium ... [more]
A0A067CCG8_SAPPC4.370e-2741.61Uncharacterized protein n=1 Tax=Saprolegnia parasi... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 169..204
NoneNo IPR availableCOILSCoilCoilcoord: 228..248
NoneNo IPR availablePANTHERPTHR12132:SF1DNA REPAIR PROTEIN RAD52 HOMOLOGcoord: 21..226
NoneNo IPR availableSUPERFAMILY54768dsRNA-binding domain-likecoord: 26..199
IPR042525DNA repair protein Rad52/59/22 superfamilyGENE3D3.30.390.80coord: 28..176
e-value: 1.4E-41
score: 143.6
IPR041247Rad52 familyPFAMPF04098Rad52_Rad22coord: 33..180
e-value: 9.2E-36
score: 123.1
IPR007232DNA repair protein Rad52/59/22PANTHERPTHR12132DNA REPAIR AND RECOMBINATION PROTEIN RAD52, RAD59coord: 21..226

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig772contigL-elsbetiae_contig772:8032..16955 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig772.16667.1mRNA_L-elsbetiae_contig772.16667.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig772 8032..16979 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig772.16667.1 ID=prot_L-elsbetiae_contig772.16667.1|Name=mRNA_L-elsbetiae_contig772.16667.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=494bp
MEPASYNSERHVASGQGGQWVFGTDRFTDEDNARIQEALNAALNWNQISS
RPGGGGKKVSYLAGHTVFENANNVFGFAGWDSSILHLSVDYVEKSDDGRH
WMASATAIVRVALANGCGHEDVGNAHLKDRDKGEVLQRVKKAAVTDAKKR
ALRLFGTQLGMSMSDKEGLKDAERTHKQNQKELRANQERDAQRRQQQQQQ
QQQQQQQHQHQPQPQQHQQQQPPSPQQQQQQQQQRQQQQQEQQQQHQRAR
GPGGKPQTPQRRKQQHQAAPGSTIAAGNGGGGAAAASSPRAVPQQVPIAA
PPPTAAAAVATGPRAILRESSPNKTNRSGGGGSGGGGGGGGGSGRGLLVE
MAAQRNNSPAFDYTVADGDGGGEAAVSAQAGPAALGLLPAEAAPATAVPA
VGGIGGAGERGGADERSGPGGGGDMDGGGGGDEFGLSQDFELATLMEIDS
AIHRHTTSGLSAGSRDGGSDGSGGGGGGGVNENVGGVARGVGGG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR042525Rad52_Rad59_Rad22_sf
IPR041247Rad52_fam
IPR007232Rad52_Rad59_Rad22