prot_L-elsbetiae_contig772.16666.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig772.16666.1
Unique Nameprot_L-elsbetiae_contig772.16666.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length143
Homology
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BLAST of mRNA_L-elsbetiae_contig772.16666.1 vs. uniprot
Match: A0A6H5K1C2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1C2_9PHAE)

HSP 1 Score: 82.4 bits (202), Expect = 1.490e-15
Identity = 48/90 (53.33%), Postives = 55/90 (61.11%), Query Frame = 0 
Query:    5 SHGGERRSSAAGSLVLVMHPDTGTRLHCPHCDEEVAGCGFKGCSGSLVQAPSDDDFGRSDDDELFGPEVFVAPPLPPPL-FPKLGPHTSA 93
            S GGE RSS   SLV  M  + GTRLHCPHC +EVAGCGF+GCSGSL++ PS  D         FGPE     P P P+  P LG  +SA
Sbjct:  555 STGGETRSSGVKSLV--MFAEYGTRLHCPHCSKEVAGCGFRGCSGSLIRKPSFSD--------EFGPEESFTLPAPQPMRAPALGGFSSA 634
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BLAST of mRNA_L-elsbetiae_contig772.16666.1 vs. uniprot
Match: D7FH00_ECTSI (G_PROTEIN_RECEP_F3_4 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FH00_ECTSI)

HSP 1 Score: 82.0 bits (201), Expect = 2.050e-15
Identity = 48/90 (53.33%), Postives = 54/90 (60.00%), Query Frame = 0 
Query:    5 SHGGERRSSAAGSLVLVMHPDTGTRLHCPHCDEEVAGCGFKGCSGSLVQAPSDDDFGRSDDDELFGPEVFVAPPLPPPL-FPKLGPHTSA 93
            S GGE RSS   SLV  M  + GTRLHCPHC +EVAGCGF+GCSGSL++ PS  D         FGPE     P P P+  P  G  TSA
Sbjct:  586 SAGGETRSSGVKSLV--MFAEYGTRLHCPHCSKEVAGCGFRGCSGSLIRKPSFSD--------EFGPEESFTLPAPQPVRAPAFGGFTSA 665
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig772.16666.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5K1C2_9PHAE1.490e-1553.33Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FH00_ECTSI2.050e-1553.33G_PROTEIN_RECEP_F3_4 domain-containing protein n=1... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig772contigL-elsbetiae_contig772:1727..2183 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig772.16666.1mRNA_L-elsbetiae_contig772.16666.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig772 1667..3054 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig772.16666.1 ID=prot_L-elsbetiae_contig772.16666.1|Name=mRNA_L-elsbetiae_contig772.16666.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=143bp
MGSSSHGGERRSSAAGSLVLVMHPDTGTRLHCPHCDEEVAGCGFKGCSGS
LVQAPSDDDFGRSDDDELFGPEVFVAPPLPPPLFPKLGPHTSAADAAAAP
QPPPRATAVLVIFLGAAAGEAGAEEEVHRRPRPVRTMSRAAT*
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