prot_L-elsbetiae_contig772.16664.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig772.16664.1
Unique Nameprot_L-elsbetiae_contig772.16664.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length124
Homology
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BLAST of mRNA_L-elsbetiae_contig772.16664.1 vs. uniprot
Match: A0A6H5K1C2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1C2_9PHAE)

HSP 1 Score: 69.7 bits (169), Expect = 2.170e-11
Identity = 53/84 (63.10%), Postives = 60/84 (71.43%), Query Frame = 0 
Query:    2 AIVLAGVGSLFSILAPKVLRAKHELEGKALVGPSAVV----TGP--SGS-GDALFGIERGELGGDGGDGP-PRTSTPSGVSSVG 77
            AI+LAGVG LF +L  ++LRAK ELEGKALV PSA      TGP  SGS GDAL G+  GE   DG + P PRT+TPSGVSSVG
Sbjct:   33 AILLAGVGVLFPVLGTRLLRAKQELEGKALVAPSAAAAAAATGPGTSGSVGDALRGV--GERAMDGDEYPEPRTTTPSGVSSVG 114
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BLAST of mRNA_L-elsbetiae_contig772.16664.1 vs. uniprot
Match: D7FH00_ECTSI (G_PROTEIN_RECEP_F3_4 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FH00_ECTSI)

HSP 1 Score: 66.2 bits (160), Expect = 3.570e-10
Identity = 49/77 (63.64%), Postives = 56/77 (72.73%), Query Frame = 0 
Query:    2 AIVLAGVGSLFSILAPKVLRAKHELEGKALVGPSAVV--TGPS--GS-GDALFGIERGELGGDGGDGP-PRTSTPSG 72
            AI+LAGVG LF +L  +VLRAK ELEGKALVGPSA    TGP   GS GDAL+G+  GE   DG + P PRT+TPSG
Sbjct:  316 AILLAGVGVLFPVLGTRVLRAKQELEGKALVGPSAAAAATGPGTGGSVGDALYGV--GERAMDGDEYPEPRTTTPSG 390
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig772.16664.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5K1C2_9PHAE2.170e-1163.10Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FH00_ECTSI3.570e-1063.64G_PROTEIN_RECEP_F3_4 domain-containing protein n=1... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 16..21
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 22..123
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..21
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..3
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 4..15

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig772contigL-elsbetiae_contig772:176..693 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig772.16664.1mRNA_L-elsbetiae_contig772.16664.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig772 152..693 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig772.16664.1 ID=prot_L-elsbetiae_contig772.16664.1|Name=mRNA_L-elsbetiae_contig772.16664.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=124bp
MAIVLAGVGSLFSILAPKVLRAKHELEGKALVGPSAVVTGPSGSGDALFG
IERGELGGDGGDGPPRTSTPSGVSSVGGGGGKRMSSGRRRRTLSGGGLVR
VRHHGRSRSPAGPKQRRWRRRRQ*
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