prot_L-elsbetiae_contig77.16636.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig77.16636.1
Unique Nameprot_L-elsbetiae_contig77.16636.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length102
Homology
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BLAST of mRNA_L-elsbetiae_contig77.16636.1 vs. uniprot
Match: D7G6E4_ECTSI (PAP_fibrillin domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G6E4_ECTSI)

HSP 1 Score: 87.8 bits (216), Expect = 3.380e-19
Identity = 48/69 (69.57%), Postives = 55/69 (79.71%), Query Frame = 0 
Query:    1 PLLKARAHCALFDLKQAQDLKQTILTEAAGTSNGLKASQQQRDAISKAVNGLVALNPTKGITTSELATG 69
            P LKA+ H     +++ + LKQTIL EAAGTSNGLKA+ QQRDAISKA+NGL A NPTK ITTSELATG
Sbjct:   44 PRLKAK-HADEVAVEEVRALKQTILEEAAGTSNGLKATPQQRDAISKAINGLAAANPTKDITTSELATG 111
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig77.16636.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G6E4_ECTSI3.380e-1969.57PAP_fibrillin domain-containing protein n=2 Tax=Ec... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006843Plastid lipid-associated protein/fibrillin conserved domainPFAMPF04755PAP_fibrillincoord: 18..67
e-value: 4.4E-6
score: 26.8

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig77contigL-elsbetiae_contig77:36764..37213 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig77.16636.1mRNA_L-elsbetiae_contig77.16636.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig77 36764..37786 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig77.16636.1 ID=prot_L-elsbetiae_contig77.16636.1|Name=mRNA_L-elsbetiae_contig77.16636.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=102bp
PLLKARAHCALFDLKQAQDLKQTILTEAAGTSNGLKASQQQRDAISKAVN
GLVALNPTKGITTSELATGKNVESSVYYYSRGVRREARAFCGGGAARSRH
C*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006843PAP/fibrillin_dom