prot_L-elsbetiae_contig77.16634.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig77.16634.1
Unique Nameprot_L-elsbetiae_contig77.16634.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length433
Homology
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BLAST of mRNA_L-elsbetiae_contig77.16634.1 vs. uniprot
Match: D7G6E2_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G6E2_ECTSI)

HSP 1 Score: 560 bits (1444), Expect = 6.770e-197
Identity = 319/414 (77.05%), Postives = 349/414 (84.30%), Query Frame = 0 
Query:   24 SSSDQAAETNAQLASLHEVSAAADLAAMGRRSEAAPLLERAVEICSGSMGPDSALTRAAMHRLALVLYDDQRFGAAEAALTRGLSSAHNRFSTELLLLSKAQLFQGKVVSAVDTCSQAVDLCQQDEDNTPDTDALGQALRQLGATQVLQGAEDDAETSLLRAARLGSTSADQGKGLAALAAFNIARGDEQSVEEAVDLLNEACATTKDTEEEEGEDTETAEGNVPLDVGAGVNGDAAAAFA----AQLAHASVLCTSAQGELILGRGTATASDRLGEALRIREKLLPAGHPATAWTLSLLGRCHLVAGEAVTAEGLFRAALDGLPGVAEEADD-IAKSQRSAGVVAPPVLFASPLHPFSKAAMLRGYSELLMQWEKREAEGEVTARQAETVESSLLLKPPGEITMHMLHLDDAY 432
            SSSDQAAE NAQL SLHEVS A DLAA+GRR+EAA LLERAVEICSGSMG D ALTRAA+HRLA VLYDDQRFGAAEA L +G S+A  +F TELLLLSKAQLFQGK+  AV+T S+AVDLCQQDEDNTPDTDALGQALRQLG  QVL G EDDAETSLLRAARLGSTSADQGKGLAA+AAFNIARGDEQSVEEAV+LLNEACATT +++E +     TA          G   DAAA+ A    A+LAHASVL T+AQGEL+L RGTATAS+RLGEAL+IRE+LLP GHPATAWTLSLL RCH+ AGEAVTAEGLFRAALD L G+AEE DD IA+ QRSAG VA P+LFASPLHP +KAA LRGYSELL+QWEKREAEGEV ARQAE VESSLLLKPP  +T+HMLHLDD Y
Sbjct:   17 SSSDQAAEANAQLESLHEVSTAVDLAALGRRTEAASLLERAVEICSGSMGEDCALTRAAVHRLAQVLYDDQRFGAAEAILRKGESNARKQFPTELLLLSKAQLFQGKIPVAVETSSRAVDLCQQDEDNTPDTDALGQALRQLGVIQVLSGEEDDAETSLLRAARLGSTSADQGKGLAAVAAFNIARGDEQSVEEAVELLNEACATTSESDEHK---EPTAXXXXXXXXXGGXXNDAAASAATSKVARLAHASVLSTAAQGELVLERGTATASERLGEALKIREQLLPIGHPATAWTLSLLARCHVAAGEAVTAEGLFRAALDSLQGIAEEVDDGIARRQRSAGTVALPLLFASPLHPHTKAATLRGYSELLLQWEKREAEGEVVARQAEKVESSLLLKPPVGLTLHMLHLDDVY 427
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BLAST of mRNA_L-elsbetiae_contig77.16634.1 vs. uniprot
Match: A0A835ZDH7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZDH7_9STRA)

HSP 1 Score: 158 bits (399), Expect = 1.010e-40
Identity = 137/381 (35.96%), Postives = 187/381 (49.08%), Query Frame = 0 
Query:   72 MGPDSALTRAAMHRLALVLYDDQRFGAAEAALTRGLSSAHN-----RFSTELLLLSKAQLFQGKVVSAVDTCSQAVDLCQQDEDN-TPDTDALGQALRQLGATQVLQGAEDDAETSLLRAARLGSTSADQGKGLAALAAFNIARGDEQSVEEAVDLLNEACATTKDTEEEEGEDTETAEGNVPLDVGAGVNGDAAAAFAA------QLAHASVLCTSAQGELILGRG------------TATASDRLGEALRIREKLLPAGHPATAWTLSLLGRCHLVAGEAVTAEGLFRAALDGLPGVAEEADDIAKSQRSAGVVAPPVLFASPLHPFSKAAMLRGYSELLMQWEKREAEGEVTARQAETVESSLLLKPPGEITMHMLHL 428
            MG ++ LT+AA  RL L LY   R   AEAA+   + +         +   +LL+++AQLFQGK+ +A  TC+ AV  C+      TPDT ALG ALR LG  Q+L+G  D AETSLLRAARL   +ADQ K   A     +AR         V  L+   A +   E  EG           + V    +  AAA+  A      Q  HA  L   A+  L    G            T   S  L EAL++ E+ +    P   W L+ L RC  +AG AVTAEGLFR+A++ +     + +D+   Q  A       +  SP + F     L  YS+LL+QWEKREA G    ++A+ +E+ L LK P  +++ MLHL
Sbjct:    1 MGKEALLTQAANRRLGLTLYRAGRLAEAEAAVRAAVGAGDGAAQLAEYVGAVLLVARAQLFQGKLAAAAATCADAVRACEDGVSGATPDTAALGNALRSLGVVQLLRGDGDAAETSLLRAARLSDGAADQAKARIARQGPAVARV------LVVCALSSLAAYSMSIETAEGHRDALEYWQEAVSVLTAADAQAAASACAKTKRELQETHAITLTNLAEAALTGAPGPYETAGAGGKADTERPSAHLREALKLSEQSMGHNDPYLGWVLAQLARCCHLAGSAVTAEGLFRSAMEKM-----DPEDVRGKQALA-------MHPSPANIFLLQGTLSMYSQLLLQWEKREAVGRKMQQRAQDLEAGLPLKLPPRVSLPMLHL 363
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig77.16634.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G6E2_ECTSI6.770e-19777.05Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835ZDH7_9STRA1.010e-4035.96Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePFAMPF13424TPR_12coord: 43..107
e-value: 1.5E-8
score: 34.8
NoneNo IPR availablePANTHERPTHR45783FAMILY NOT NAMEDcoord: 49..182
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 261..364
e-value: 1.4E-7
score: 32.8
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 14..251
e-value: 8.4E-15
score: 56.5
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 47..344

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig77contigL-elsbetiae_contig77:27619..30925 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig77.16634.1mRNA_L-elsbetiae_contig77.16634.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig77 27610..31293 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig77.16634.1 ID=prot_L-elsbetiae_contig77.16634.1|Name=mRNA_L-elsbetiae_contig77.16634.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=433bp
MMQRTTMLLGTRQTRVRAAHRGLSSSDQAAETNAQLASLHEVSAAADLAA
MGRRSEAAPLLERAVEICSGSMGPDSALTRAAMHRLALVLYDDQRFGAAE
AALTRGLSSAHNRFSTELLLLSKAQLFQGKVVSAVDTCSQAVDLCQQDED
NTPDTDALGQALRQLGATQVLQGAEDDAETSLLRAARLGSTSADQGKGLA
ALAAFNIARGDEQSVEEAVDLLNEACATTKDTEEEEGEDTETAEGNVPLD
VGAGVNGDAAAAFAAQLAHASVLCTSAQGELILGRGTATASDRLGEALRI
REKLLPAGHPATAWTLSLLGRCHLVAGEAVTAEGLFRAALDGLPGVAEEA
DDIAKSQRSAGVVAPPVLFASPLHPFSKAAMLRGYSELLMQWEKREAEGE
VTARQAETVESSLLLKPPGEITMHMLHLDDAY*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf