prot_L-elsbetiae_contig7690.16624.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig7690.16624.1
Unique Nameprot_L-elsbetiae_contig7690.16624.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length252
Homology
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BLAST of mRNA_L-elsbetiae_contig7690.16624.1 vs. uniprot
Match: D7FQH0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQH0_ECTSI)

HSP 1 Score: 132 bits (332), Expect = 1.010e-31
Identity = 66/111 (59.46%), Postives = 83/111 (74.77%), Query Frame = 0 
Query:  123 GGSGAVEGAFFSSSAPIELGGTRRGNYRYVRLLDVDSEESFQAVLVACERVGSYRVVGWCKRRWLMDILFECRRDAMAAIDDIEHLDLISTRLGRPIKVLVKPADFEAGFS 233
            GG     G++F S    +    +R + RYVR+LD+DS+  +QAVL AC+RVGS+RVVGWCKRRWLMDILFE RRDA AA+DDI+HL L S+R  RPIK L+KPA F+ GF+
Sbjct:   33 GGHEVDRGSYFVSRPSPKASLDQRDDDRYVRILDIDSDPLYQAVLDACDRVGSFRVVGWCKRRWLMDILFESRRDAAAALDDIDHLRLASSRSRRPIKTLLKPARFDGGFT 143
[Close]
BLAST of mRNA_L-elsbetiae_contig7690.16624.1 vs. uniprot
Match: A0A6H5K1S2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1S2_9PHAE)

HSP 1 Score: 133 bits (334), Expect = 1.150e-31
Identity = 67/111 (60.36%), Postives = 82/111 (73.87%), Query Frame = 0 
Query:  123 GGSGAVEGAFFSSSAPIELGGTRRGNYRYVRLLDVDSEESFQAVLVACERVGSYRVVGWCKRRWLMDILFECRRDAMAAIDDIEHLDLISTRLGRPIKVLVKPADFEAGFS 233
            GG     G++F S    +    +R + RYVR+LD+DS+  +QAVL AC+RVGS+RVVGWCKRRWLMDILFE RRDA AA+DDI+HL L S+R  RPIK L+KPA F  GFS
Sbjct: 1065 GGHEVDRGSYFVSRPSPKASFDQRDDDRYVRILDIDSDPLYQAVLDACDRVGSFRVVGWCKRRWLMDILFESRRDAAAALDDIDHLRLASSRSRRPIKTLLKPARFNGGFS 1175
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig7690.16624.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FQH0_ECTSI1.010e-3159.46Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5K1S2_9PHAE1.150e-3160.36Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 6..16
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..5
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 22..252
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..21
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 17..21

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig7690contigL-elsbetiae_contig7690:4005..7931 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig7690.16624.1mRNA_L-elsbetiae_contig7690.16624.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig7690 4004..7931 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig7690.16624.1 ID=prot_L-elsbetiae_contig7690.16624.1|Name=mRNA_L-elsbetiae_contig7690.16624.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=252bp
SAAVDAAAAAAAAAAAAAAAASQVSIDDREFGAVDSPRVGGGRDRGTARQ
LPSPSDRRASADGPSGPAAATAAAGEEGTAGAKGRGCGLPAQACYSSEGG
SEREATLSAFHLSDGSPASSAGGGSGAVEGAFFSSSAPIELGGTRRGNYR
YVRLLDVDSEESFQAVLVACERVGSYRVVGWCKRRWLMDILFECRRDAMA
AIDDIEHLDLISTRLGRPIKVLVKPADFEAGFSAASVTGVSLAPAAAAVT
PS
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