prot_L-elsbetiae_contig7688.16622.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig7688.16622.1
Unique Nameprot_L-elsbetiae_contig7688.16622.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length198
Homology
BLAST of mRNA_L-elsbetiae_contig7688.16622.1 vs. uniprot
Match: A0A6H5JBV2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBV2_9PHAE)

HSP 1 Score: 73.6 bits (179), Expect = 9.350e-12
Identity = 54/129 (41.86%), Postives = 66/129 (51.16%), Query Frame = 0
Query:   12 GRSAPPADRFVSLDEPSPADGKVDREITSRIRRAI-CFRRHDEAMYDRRRIDRRLKA-----------GPSKPVQTGCEENYTRGRHRAHDKARETHSSLGLRTEDDRLRKRVLLGTMAQGQGLSGRAE 128
            G++    DRFV L     ADGK DREITSR  RA  C+RR+  +MYDRRR DR+LK              +  +Q  CEE           K R   +   +R ED+RL KR+LLG MA G G  G  E
Sbjct:  709 GQTYKQRDRFVYLGRTISADGKADREITSRSCRAWKCYRRNSASMYDRRRADRQLKIRLPQAETALSYAQALIIQADCEETIKA----TVRKQRLCFAGFVMRMEDNRLPKRMLLGAMAGGGGYRGGQE 833          
BLAST of mRNA_L-elsbetiae_contig7688.16622.1 vs. uniprot
Match: A0A6H5JUJ6_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUJ6_9PHAE)

HSP 1 Score: 69.7 bits (169), Expect = 1.570e-10
Identity = 63/170 (37.06%), Postives = 82/170 (48.24%), Query Frame = 0
Query:   12 GRSAPPADRFVSLDEPSPADGKVDREITSRIRRAI-CFRRHDEAMYDRRRIDRRLKAG--PSKPVQT---GCE------ENYTR--GRHR-------------------AHD-----------------KARETHSSLGLRTEDDRLRKRVLLGTMAQGQGLSGRAEERV 131
            G++    DRFV L     ADGK DREITSR  RA  C+RR+  +MYDRRR DR+L+     ++ V+T   GC       E YT+  G HR                   +H                  K R   +   +R ED+RL KR+LLG MA G+G+ GRA ER+
Sbjct:  162 GQTYKQTDRFVYLGRTISADGKADREITSRSCRAWKCYRRNSASMYDRRRADRQLQIRLLQAQVVETLLYGCASWSLTAERYTKLNGTHRQFLTWCIGWSKRKRSDRPMSHAPALIQAGCEETIEATVRKRRLCFAGFVIRMEDNRLPKRMLLGAMAGGRGIPGRAGERL 331          
BLAST of mRNA_L-elsbetiae_contig7688.16622.1 vs. uniprot
Match: A0A6H5L6D4_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6D4_9PHAE)

HSP 1 Score: 63.2 bits (152), Expect = 3.910e-9
Identity = 49/118 (41.53%), Postives = 57/118 (48.31%), Query Frame = 0
Query:   12 GRSAPPADRFVSLDEPSPADGKVDREITSRIRRAI-CFRRHDEAMYDRRRIDRRLKAGPSKPVQTGCEENYTRGRHRAHDKARETHSSLGLRTEDDRLRKRVLLGTMAQGQGLSGRAE 128
            G++    DRFV L     ADGK DREITSR  RA  C+RR+   MYDRRR +R             CEE           K R   +   +R  D RL KR+LLG MA G G  G  E
Sbjct:   61 GQTYKQTDRFVYLGRTISADGKADREITSRSCRAWKCYRRNIALMYDRRRANR-------------CEETIEA----TVRKRRLCFAGFVMRMGDSRLPKRMLLGAMAGGMGYRGGQE 161          
BLAST of mRNA_L-elsbetiae_contig7688.16622.1 vs. uniprot
Match: A0A6H5JYX1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYX1_9PHAE)

HSP 1 Score: 65.5 bits (158), Expect = 5.230e-9
Identity = 56/132 (42.42%), Postives = 69/132 (52.27%), Query Frame = 0
Query:   12 GRSAPPADRFVSLDEPSPADGKVDREITSRIRRAI-CFRRHDEAMYDRRRIDRRLKAG--PSKPVQT---GCE------ENYTRGRHRAHDKARETHSSLGLRT---EDDRLRKRVLLGTMAQGQGLSGRAE 128
            G++    DRFV L     ADGK DREITSR  RA  C+RR+  +  DRRR DR+LK+    ++ V+T   GC       E+YT        K   TH     R    ED+RL KR+LLG MA G G  G  E
Sbjct:  399 GQTYMQTDRFVYLGRTISADGKADREITSRSCRAWKCYRRNSASTCDRRRADRQLKSKLLQAEVVETLLCGCAWWSLTAEHYT--------KLNGTHRQFLTRPSXMEDNRLPKRMLLGAMAGGVGYWGGQE 522          
BLAST of mRNA_L-elsbetiae_contig7688.16622.1 vs. uniprot
Match: A0A6H5JYJ0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYJ0_9PHAE)

HSP 1 Score: 62.8 bits (151), Expect = 2.020e-8
Identity = 47/110 (42.73%), Postives = 58/110 (52.73%), Query Frame = 0
Query:   19 DRFVSLDEPSPADGKVDREITSRIRRAI-CFRRHDEAMYDRRRIDRRLKAG--PSKPVQT---GCEENYTRGRHRAHDKARETHSSLGLRTEDDRLRKRVLLGTMAQGQG 122
            DRFV L+    ADGK DREITSR  RA  C+RR+  +MYDRRR DR+LK     ++ V+T   GC                   +S  L  E     KR+LLG MA+G G
Sbjct:  154 DRFVYLERTISADGKADREITSRSCRAWKCYRRNSASMYDRRRADRQLKIRLLQAEVVETLLYGC-------------------ASWSLTAEHYTKPKRMLLGAMARGVG 244          
BLAST of mRNA_L-elsbetiae_contig7688.16622.1 vs. uniprot
Match: A0A6H5JRB2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRB2_9PHAE)

HSP 1 Score: 63.2 bits (152), Expect = 2.310e-8
Identity = 51/134 (38.06%), Postives = 60/134 (44.78%), Query Frame = 0
Query:   12 GRSAPPADRFVSLDEPSPADGKVDREITSRIRRAI-CFRRHDEAMYDRRRIDRRLKAGPSKP----------------VQTGCEENYTRGRHRAHDKARETHSSLGLRTEDDRLRKRVLLGTMAQGQGLSGRAE 128
            G++    DRFV +     ADGK DREITSR  R   C+RR+  +MYDRRR   R      K                 +Q GCEE           K R   +   LR ED RL KR+LLG  A G G  G  E
Sbjct:   42 GQTYKQTDRFVYVGRTISADGKADREITSRSCRVWKCYRRNSASMYDRRRASSRFGYSRLKSLRISDMGLPLSYAQALIQAGCEETIEA----TVRKRRLCFAGCILRMEDKRLPKRMLLGATAGGVGYRGGQE 171          
BLAST of mRNA_L-elsbetiae_contig7688.16622.1 vs. uniprot
Match: A0A6H5L376_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L376_9PHAE)

HSP 1 Score: 61.6 bits (148), Expect = 8.670e-8
Identity = 59/167 (35.33%), Postives = 75/167 (44.91%), Query Frame = 0
Query:   12 GRSAPPADRFVSLDEPSPADGKVDREITSRIRRAI-CFRRHDEAMYDRRRIDRRLKAG--PSKPVQT---GCE------ENYTR--GRHRAH------------------------------------DKARETHSSLGLRTEDDRLRKRVLLGTMAQGQGLSGRAE 128
            G++    DRFV L     A+GK DREITSR  RA  C+RR+  +MYDRRR D +LK     ++ V+T   GC       E+YT+  G HR                                       K R   +   +RTED+RL KR+LLG MA G G  G  E
Sbjct:   83 GQTYKQTDRFVYLGRTISANGKADREITSRSCRACKCYRRNSASMYDRRRADCQLKIRLLQAEVVETLLYGCASWSLTAEHYTKLNGTHRQFLTRCIGWSKRKRSDRPLSYAQALIQAGCEETIEATVRKRRLCFAGFVMRTEDNRLPKRMLLGAMAGGVGYRGGQE 249          
BLAST of mRNA_L-elsbetiae_contig7688.16622.1 vs. uniprot
Match: A0A6H5L7Y9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7Y9_9PHAE)

HSP 1 Score: 59.7 bits (143), Expect = 1.370e-7
Identity = 32/56 (57.14%), Postives = 38/56 (67.86%), Query Frame = 0
Query:   12 GRSAPPADRFVSLDEPSPADGKVDREITSRIRRAI-CFRRHDEAMYDRRRIDRRLK 66
            G++    DRFV L     ADGK DREITSR  RA  C+RR   +MYDRRR+DR+LK
Sbjct:   32 GQTYKQTDRFVYLGRTISADGKADREITSRSCRAWKCYRRKSASMYDRRRVDRKLK 87          
BLAST of mRNA_L-elsbetiae_contig7688.16622.1 vs. uniprot
Match: A0A6H5KGC0_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGC0_9PHAE)

HSP 1 Score: 58.5 bits (140), Expect = 2.030e-7
Identity = 32/56 (57.14%), Postives = 38/56 (67.86%), Query Frame = 0
Query:   12 GRSAPPADRFVSLDEPSPADGKVDREITSRIRRAI-CFRRHDEAMYDRRRIDRRLK 66
            G++    DRFV L     ADGK DREITSR  RA  C+RR+  +MYDRRR DR+LK
Sbjct:  104 GQTYKQTDRFVYLGRTISADGKADREITSRSCRAWKCYRRNSASMYDRRRADRQLK 159          
BLAST of mRNA_L-elsbetiae_contig7688.16622.1 vs. uniprot
Match: A0A6H5JKH3_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKH3_9PHAE)

HSP 1 Score: 58.5 bits (140), Expect = 2.400e-7
Identity = 32/56 (57.14%), Postives = 38/56 (67.86%), Query Frame = 0
Query:   12 GRSAPPADRFVSLDEPSPADGKVDREITSRIRRAI-CFRRHDEAMYDRRRIDRRLK 66
            G++    DRFV L     ADGK DREITSR  RA  C+RR+  +MYDRRR DR+LK
Sbjct:   61 GQTYKQTDRFVYLGRTISADGKADREITSRSCRAWKCYRRNSASMYDRRRADRQLK 116          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig7688.16622.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JBV2_9PHAE9.350e-1241.86Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JUJ6_9PHAE1.570e-1037.06Reverse transcriptase domain-containing protein n=... [more]
A0A6H5L6D4_9PHAE3.910e-941.53Reverse transcriptase domain-containing protein n=... [more]
A0A6H5JYX1_9PHAE5.230e-942.42Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JYJ0_9PHAE2.020e-842.73Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JRB2_9PHAE2.310e-838.06Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L376_9PHAE8.670e-835.33Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L7Y9_9PHAE1.370e-757.14Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KGC0_9PHAE2.030e-757.14Reverse transcriptase domain-containing protein (F... [more]
A0A6H5JKH3_9PHAE2.400e-757.14Reverse transcriptase domain-containing protein (F... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig7688contigL-elsbetiae_contig7688:2123..2931 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig7688.16622.1mRNA_L-elsbetiae_contig7688.16622.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig7688 2123..2931 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig7688.16622.1 ID=prot_L-elsbetiae_contig7688.16622.1|Name=mRNA_L-elsbetiae_contig7688.16622.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=198bp
CPAITGLYRKKGRSAPPADRFVSLDEPSPADGKVDREITSRIRRAICFRR
HDEAMYDRRRIDRRLKAGPSKPVQTGCEENYTRGRHRAHDKARETHSSLG
LRTEDDRLRKRVLLGTMAQGQGLSGRAEERVMGVPPREKTLWRLAWKTKK
RKSGRVVSAKGRGRGGVVYGEVACTGSRSLCEAPIREGGGGGEHCRC*
back to top