prot_L-elsbetiae_contig7680.16613.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig7680.16613.1
Unique Nameprot_L-elsbetiae_contig7680.16613.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length256
Homology
BLAST of mRNA_L-elsbetiae_contig7680.16613.1 vs. uniprot
Match: A0A8D5YZX2_9PHAE (NADH-ubiquinone oxidoreductase chain 6 n=1 Tax=Striaria attenuata TaxID=64933 RepID=A0A8D5YZX2_9PHAE)

HSP 1 Score: 383 bits (983), Expect = 7.320e-132
Identity = 208/262 (79.39%), Postives = 232/262 (88.55%), Query Frame = 0
Query:    4 SSTQNPVYSGLYLVLLFFLGSGIAFLLGLEFIALLFLLVYAGAIAVLVLFVVMMLDVKAIENPWSAKKKRLLYLGGILFLFFLISVGYSEDLQQSMKFFATTYIGSLVLFSFITYEDHLKTIFQPKIVTDN----IE-------ALNDKIVSWKNLCDSENLTEFFRLSFYKENVDSSYCTNNMWFVDFDTSCALNDPSYLLYSTYAILLIIAGVILLIAMVGAITLTLQKNCPESLYRQLGRESKNAVFSIKEKASSRTLP 254
            +STQNPVYSGLYLVLLFFLGSGIAFLLGLEFIALLFLLVYAGAIAVLVLFVVMMLDVKAIENPWSAKKKRLLYL G++F   LI+VG S DLQQSMKFFAT+YIGSLV FS ITYE++++ +FQP ++ ++    IE       +LN++I SW NLCDSE LTEFFRLS+ KE++++SY  NNMWFV+FDTSCALNDPSYLLYSTYAILLIIAGVILLIAMVGAITLTLQKNCPESLYRQLGRESKNAVFSIKEK SSR +P
Sbjct:   22 TSTQNPVYSGLYLVLLFFLGSGIAFLLGLEFIALLFLLVYAGAIAVLVLFVVMMLDVKAIENPWSAKKKRLLYLAGLVFCCCLIAVGLSGDLQQSMKFFATSYIGSLVFFSAITYEEYIRKVFQPIVIGEDKFSKIEVKKIYDKSLNERIDSWYNLCDSEGLTEFFRLSYNKESIENSYGINNMWFVEFDTSCALNDPSYLLYSTYAILLIIAGVILLIAMVGAITLTLQKNCPESLYRQLGRESKNAVFSIKEKTSSRAIP 283          
BLAST of mRNA_L-elsbetiae_contig7680.16613.1 vs. uniprot
Match: A0A8D5Z5F5_9PHAE (NADH-ubiquinone oxidoreductase chain 6 n=2 Tax=Chordariaceae TaxID=66220 RepID=A0A8D5Z5F5_9PHAE)

HSP 1 Score: 379 bits (973), Expect = 2.430e-130
Identity = 206/261 (78.93%), Postives = 227/261 (86.97%), Query Frame = 0
Query:    4 SSTQNPVYSGLYLVLLFFLGSGIAFLLGLEFIALLFLLVYAGAIAVLVLFVVMMLDVKAIENPWSAKKKRLLYLGGILFLFFLISVGYSEDLQQSMKFFATTYIGSLVLFSFITYEDHLKTIFQP------KIVTDNI-----EALNDKIVSWKNLCDSENLTEFFRLSFYKENVDSSYCTNNMWFVDFDTSCALNDPSYLLYSTYAILLIIAGVILLIAMVGAITLTLQKNCPESLYRQLGRESKNAVFSIKEKASSRTL 253
            +STQNPVYSGLYLVLLFFLGSGIAFLLGLEFIALLFLLVYAGAIAVLVLFVVMMLDVKAIENPWSAKKKRL YL G++    LI VG++E+LQQ MKFFATTYIGSL+LFSF+TYE+++K  FQP      KI    I     E L++++ SW N CDSE LTEFFRLSF+K+++D+SY  NNMWFV+FDTSCALNDPSYLLYSTYAILLIIAGVILLIAMVGAITLTLQKNCPESLYRQLGRESKNAVFSIKEK  SRTL
Sbjct:   22 TSTQNPVYSGLYLVLLFFLGSGIAFLLGLEFIALLFLLVYAGAIAVLVLFVVMMLDVKAIENPWSAKKKRLFYLAGLVLFVCLIVVGWNENLQQFMKFFATTYIGSLILFSFMTYEEYIKKNFQPIIMGEDKITNTEITKTFQELLDERVESWYNFCDSEGLTEFFRLSFHKQSIDTSYGINNMWFVEFDTSCALNDPSYLLYSTYAILLIIAGVILLIAMVGAITLTLQKNCPESLYRQLGRESKNAVFSIKEKTPSRTL 282          
BLAST of mRNA_L-elsbetiae_contig7680.16613.1 vs. uniprot
Match: A0A8D5Z4C0_9PHAE (NADH-ubiquinone oxidoreductase chain 6 n=3 Tax=Punctaria TaxID=27943 RepID=A0A8D5Z4C0_9PHAE)

HSP 1 Score: 367 bits (943), Expect = 8.300e-126
Identity = 202/261 (77.39%), Postives = 226/261 (86.59%), Query Frame = 0
Query:    4 SSTQNPVYSGLYLVLLFFLGSGIAFLLGLEFIALLFLLVYAGAIAVLVLFVVMMLDVKAIENPWSAKKKRLLYLGGILFLFFLISVGYSEDLQQSMKFFATTYIGSLVLFSFITYEDHLKTIFQPKIV-------TDNI----EALNDKIVSWKNLCDSENLTEFFRLSFYKENVDSSYCTNNMWFVDFDTSCALNDPSYLLYSTYAILLIIAGVILLIAMVGAITLTLQKNCPESLYRQLGRESKNAVFSIKEKASSRTL 253
            +STQNPVYSGLYLVLLFFLGSGIAFLLGLEFIALLFLLVYAGAIAVLVLFVVMMLDVKA+EN WSAKKKRLLYL GI+F F L++VG+SEDLQQ +KFFATTYIGSLVLFS +TYE+++K  F+  I        T+ I    E L+ +I  W+NLCDSE+L  FFRLSF+KE++D+SYC NNMWFV+FD SCALNDPSYLLYSTYAILLII GVILLIAMVGAI+LTLQK+CPE LYRQLGRESKNAVFSIKEK SSRT 
Sbjct:   22 TSTQNPVYSGLYLVLLFFLGSGIAFLLGLEFIALLFLLVYAGAIAVLVLFVVMMLDVKAVENSWSAKKKRLLYLAGIVFFFCLMAVGWSEDLQQLIKFFATTYIGSLVLFSGMTYEEYIKKEFEFLIKGEDNALNTEGIKTFQELLDKRIEFWRNLCDSEDLLYFFRLSFHKESIDTSYCLNNMWFVEFDRSCALNDPSYLLYSTYAILLIIGGVILLIAMVGAISLTLQKSCPEYLYRQLGRESKNAVFSIKEKTSSRTF 282          
BLAST of mRNA_L-elsbetiae_contig7680.16613.1 vs. uniprot
Match: A0A3G5FPP4_9PHAE (NADH-ubiquinone oxidoreductase chain 6 n=1 Tax=Cladosiphon okamuranus TaxID=309737 RepID=A0A3G5FPP4_9PHAE)

HSP 1 Score: 365 bits (936), Expect = 1.030e-124
Identity = 197/262 (75.19%), Postives = 224/262 (85.50%), Query Frame = 0
Query:    4 SSTQNPVYSGLYLVLLFFLGSGIAFLLGLEFIALLFLLVYAGAIAVLVLFVVMMLDVKAIENPWSAKKKRLLYLGGILFLFFLISVGYSEDLQQSMKFFATTYIGSLVLFSFITYEDHLKTIFQPKIVTD----NIE-------ALNDKIVSWKNLCDSENLTEFFRLSFYKENVDSSYCTNNMWFVDFDTSCALNDPSYLLYSTYAILLIIAGVILLIAMVGAITLTLQKNCPESLYRQLGRESKNAVFSIKEKASSRTLP 254
            ++TQNPVYSGLYLVL+FFLGSGIAFLLGLEFIALLFLLVYAGAIAVLVLFVVMMLDVKAIENPWSAKKKRLLYLG  +F   LI + Y++DLQ S+KFFATTYIGSLVLF+ I+YE++++  F   I+ D    N E        LN++I  W  LC++E LTEFF LSF+KENVDSSY TNNMWFV+FDTSCALNDPSYLLYSTYAILLIIAG+ILLIAMVGAI+LTLQKNCPESLYRQLGRESKNA+F IKEK + ++LP
Sbjct:   22 TTTQNPVYSGLYLVLVFFLGSGIAFLLGLEFIALLFLLVYAGAIAVLVLFVVMMLDVKAIENPWSAKKKRLLYLGSFIFFCCLILISYNKDLQDSLKFFATTYIGSLVLFNLISYEEYIEKSFHSLILNDEKFVNTENRKPFSNLLNERIEGWNALCNTEGLTEFFNLSFHKENVDSSYETNNMWFVEFDTSCALNDPSYLLYSTYAILLIIAGIILLIAMVGAISLTLQKNCPESLYRQLGRESKNAIFLIKEKRACQSLP 283          
BLAST of mRNA_L-elsbetiae_contig7680.16613.1 vs. uniprot
Match: A0A8D6BYQ9_9PHAE (NADH-ubiquinone oxidoreductase chain 6 n=1 Tax=Eudesme virescens TaxID=309723 RepID=A0A8D6BYQ9_9PHAE)

HSP 1 Score: 365 bits (936), Expect = 1.030e-124
Identity = 201/261 (77.01%), Postives = 222/261 (85.06%), Query Frame = 0
Query:    4 SSTQNPVYSGLYLVLLFFLGSGIAFLLGLEFIALLFLLVYAGAIAVLVLFVVMMLDVKAIENPWSAKKKRLLYLGGILFLFFLISVGYSEDLQQSMKFFATTYIGSLVLFSFITYEDHLKTIFQPKIVTDNI-----------EALNDKIVSWKNLCDSENLTEFFRLSFYKENVDSSYCTNNMWFVDFDTSCALNDPSYLLYSTYAILLIIAGVILLIAMVGAITLTLQKNCPESLYRQLGRESKNAVFSIKEKASSRTL 253
            +STQNPVYSGLYLVLLFFLGSGIAFLLGLEFIALLFLLVYAGAIAVLVLFVVMMLDVKAIENPWSAKKKRLLYL G+ FL  LI +G SE+LQ+SMKFFAT +IGS VLFS ITY++++  IFQ  I+ +             E LN++   W+NLCDSE LTEFF  SF+KE+ D+SY  NN+WFV+FDTSCALNDPSYLLYSTYAILLIIAG+ILLIAMVGAITLTLQKNCPESLYRQLGRESKNAVFSIKEKAS R L
Sbjct:   22 TSTQNPVYSGLYLVLLFFLGSGIAFLLGLEFIALLFLLVYAGAIAVLVLFVVMMLDVKAIENPWSAKKKRLLYLLGLAFLCCLIIIGLSENLQESMKFFATIFIGSSVLFSVITYKEYITKIFQSIIMEEEKFSNREVKKIFRELLNERTDLWQNLCDSEGLTEFFHFSFHKESADNSYGINNIWFVEFDTSCALNDPSYLLYSTYAILLIIAGIILLIAMVGAITLTLQKNCPESLYRQLGRESKNAVFSIKEKASPRPL 282          
BLAST of mRNA_L-elsbetiae_contig7680.16613.1 vs. uniprot
Match: A0A8D5ZBT6_9PHAE (NADH-ubiquinone oxidoreductase chain 6 n=1 Tax=Setoutiphycus delamareoides TaxID=2849225 RepID=A0A8D5ZBT6_9PHAE)

HSP 1 Score: 362 bits (929), Expect = 1.200e-123
Identity = 202/261 (77.39%), Postives = 222/261 (85.06%), Query Frame = 0
Query:    4 SSTQNPVYSGLYLVLLFFLGSGIAFLLGLEFIALLFLLVYAGAIAVLVLFVVMMLDVKAIENPWSAKKKRLLYLGGILFLFFLISVGYSEDLQQSMKFFATTYIGSLVLFSFITYEDHLKTIFQPKIVTD----NIEA-------LNDKIVSWKNLCDSENLTEFFRLSFYKENVDSSYCTNNMWFVDFDTSCALNDPSYLLYSTYAILLIIAGVILLIAMVGAITLTLQKNCPESLYRQLGRESKNAVFSIKEKASSRTL 253
            +STQNPVYSGLYLVLLFFLGSGI FLLGLEFI LLFLLVYAGAIAVLVLFVVMMLDVKAIENPWSAKKKRL +  G+ FLF L+ +G+SE+LQQS+K FATT IG+LVLFS +TYED +K  FQP I+ +    N E        L+ +I SW +LCDSE LTEFFRLSF KEN+D+SY  N+MWFVDFDTSCALNDPSYLLYSTYAILLIIAGVILLIAMVGAITLTLQKNCPESLYRQLGRESKNAVF IKEK  +RTL
Sbjct:   22 TSTQNPVYSGLYLVLLFFLGSGIGFLLGLEFIGLLFLLVYAGAIAVLVLFVVMMLDVKAIENPWSAKKKRLFFFVGLGFLFCLLCIGWSENLQQSIKSFATTCIGTLVLFSAMTYEDSIKKKFQPIILREDKFLNTEVTKRFQDLLDGRIESWHHLCDSEGLTEFFRLSFNKENMDTSYGINHMWFVDFDTSCALNDPSYLLYSTYAILLIIAGVILLIAMVGAITLTLQKNCPESLYRQLGRESKNAVFLIKEKIPTRTL 282          
BLAST of mRNA_L-elsbetiae_contig7680.16613.1 vs. uniprot
Match: E6ZET2_ECTSI (NADH-ubiquinone oxidoreductase chain 6 n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=E6ZET2_ECTSI)

HSP 1 Score: 361 bits (927), Expect = 3.920e-123
Identity = 199/275 (72.36%), Postives = 225/275 (81.82%), Query Frame = 0
Query:    4 SSTQNPVYSGLYLVLLFFLGSGIAFLLGLEFIALLFLLVYAGAIAVLVLFVVMMLDVKAIENPWSAKKKRLLYLGGILFLFFLISVGYSEDLQQSMKFFATTYIGSLVLFSFITYEDHLKTIFQPKIVTDN-------------------------IEALNDKIVSWKNLCDSENLTEFFRLSFYKENVDSSYCTNNMWFVDFDTSCALNDPSYLLYSTYAILLIIAGVILLIAMVGAITLTLQKNCPESLYRQLGRESKNAVFSIKEKASSRTL 253
            +STQNPVYSGLYLVLLFFLGSGIAFLLGLEFIALLFLLVYAGAIAVLVLFVVMMLDVKAIENPWSAKKKRL+Y  G+ FLFFLI+VG+SE+LQ  +K FATTYIGSLVLF+ + YE+++K  FQ  +  +                          IE++++K+  W NLCDSE LTEFFRL F+KE+VDSSY +N MWF++FD+SCALNDPSYLLYSTYAILLIIAGVILLIAMVGAI+LTLQKNCPESLYRQLGRESKNAVFSIKEK  SR L
Sbjct:   22 TSTQNPVYSGLYLVLLFFLGSGIAFLLGLEFIALLFLLVYAGAIAVLVLFVVMMLDVKAIENPWSAKKKRLVYAIGLTFLFFLIAVGWSEELQNLIKLFATTYIGSLVLFNIVKYEEYIKENFQSMVNNEIAEGHLNKIKDISEFNASNKKAQKTFIESVDEKVDYWFNLCDSEGLTEFFRLLFHKESVDSSYVSNKMWFIEFDSSCALNDPSYLLYSTYAILLIIAGVILLIAMVGAISLTLQKNCPESLYRQLGRESKNAVFSIKEKKISRDL 296          
BLAST of mRNA_L-elsbetiae_contig7680.16613.1 vs. uniprot
Match: A0A089MX86_PETFA (NADH-ubiquinone oxidoreductase chain 6 n=1 Tax=Petalonia fascia TaxID=2893 RepID=A0A089MX86_PETFA)

HSP 1 Score: 348 bits (893), Expect = 6.390e-118
Identity = 198/282 (70.21%), Postives = 222/282 (78.72%), Query Frame = 0
Query:    1 GFK-SSTQNPVYSGLYLVLLFFLGSGIAFLLGLEFIALLFLLVYAGAIAVLVLFVVMMLDVKAIENPWSAKKKRLLYLGGILFLFFLISVGYSEDLQQSMKFFATTYIGSLVLFSFITYEDHLKTIFQP----KIVTDNI------------------------EALNDKIVSWKNLCDSENLTEFFRLSFYKENVDSSYCTNNMWFVDFDTSCALNDPSYLLYSTYAILLIIAGVILLIAMVGAITLTLQKNCPESLYRQLGRESKNAVFSIKEKASSRTL 253
            GFK +STQNPVYSGLYLVL FFLGSGIAFLLGLEFIALLFLLVYAGAIAVLVLFVVMMLDVKAIENPWSAKKKRLLY+  +L LF +I + Y+ DL   +K FATTYIGSLV FS  TYED++K  FQP    +I++DN+                        + LN++I  W +LC SE LTEFFRL F KE+V+SSY  N+ WFV+FD+SCALNDPSYLLYSTYAILLIIAGVILLIAMVGAI+LTLQKNCPESLYRQLGRESKNAVFSIKEK  SR +
Sbjct:   18 GFKVTSTQNPVYSGLYLVLSFFLGSGIAFLLGLEFIALLFLLVYAGAIAVLVLFVVMMLDVKAIENPWSAKKKRLLYIFSLLVLFTIILISYNSDLFNLLKSFATTYIGSLVFFSVSTYEDYIKKNFQPVVVAEIISDNLNKEKKGIEINNSNSSDTEVKKTITDLLNERINLWDDLCQSEGLTEFFRLLFNKESVNSSYSLNSTWFVEFDSSCALNDPSYLLYSTYAILLIIAGVILLIAMVGAISLTLQKNCPESLYRQLGRESKNAVFSIKEKKDSRVI 299          
BLAST of mRNA_L-elsbetiae_contig7680.16613.1 vs. uniprot
Match: A0A2H4ZQY9_9PHAE (NADH-ubiquinone oxidoreductase chain 6 n=2 Tax=Endarachne binghamiae TaxID=698476 RepID=A0A2H4ZQY9_9PHAE)

HSP 1 Score: 345 bits (885), Expect = 1.050e-116
Identity = 191/278 (68.71%), Postives = 222/278 (79.86%), Query Frame = 0
Query:    4 SSTQNPVYSGLYLVLLFFLGSGIAFLLGLEFIALLFLLVYAGAIAVLVLFVVMMLDVKAIENPWSAKKKRLLYLGGILFLFFLISVGYSEDLQQSMKFFATTYIGSLVLFSFITYEDHLKTIFQP----KIVTDNI------------------------EALNDKIVSWKNLCDSENLTEFFRLSFYKENVDSSYCTNNMWFVDFDTSCALNDPSYLLYSTYAILLIIAGVILLIAMVGAITLTLQKNCPESLYRQLGRESKNAVFSIKEKASSRTL 253
            +STQNPVYSGLYLVL FFLGS IAFLLGLEFIALLFLLVYAGAIAVLVLFVVMMLDVKAIENPWSAKKKRLLY+  +  LF ++ + Y+ +L + +K FATTYIGSLV+FS  TYED++K  FQP    +IV+DN+                        + LN++I SW +LC+SE LTEFFRL F KE+V+SSY  N+ WF++FD+SCALNDPSYLLYSTYAILLIIAG+ILLIAMVGAI+LTLQKNCPESLYRQLGRESKNAVFSIKEK  SR++
Sbjct:   22 TSTQNPVYSGLYLVLTFFLGSAIAFLLGLEFIALLFLLVYAGAIAVLVLFVVMMLDVKAIENPWSAKKKRLLYIFSLFLLFIIVLISYNLNLSELLKSFATTYIGSLVVFSISTYEDYIKKNFQPVIVAEIVSDNLNIEKKGIEINKSSGPDVEAKKPMTDLLNERINSWHDLCNSEGLTEFFRLLFNKESVNSSYNVNSTWFIEFDSSCALNDPSYLLYSTYAILLIIAGIILLIAMVGAISLTLQKNCPESLYRQLGRESKNAVFSIKEKKGSRSV 299          
BLAST of mRNA_L-elsbetiae_contig7680.16613.1 vs. uniprot
Match: A0A0U1XCQ8_SCYLO (NADH-ubiquinone oxidoreductase chain 6 n=1 Tax=Scytosiphon lomentaria TaxID=27967 RepID=A0A0U1XCQ8_SCYLO)

HSP 1 Score: 337 bits (864), Expect = 1.330e-113
Identity = 186/271 (68.63%), Postives = 213/271 (78.60%), Query Frame = 0
Query:    4 SSTQNPVYSGLYLVLLFFLGSGIAFLLGLEFIALLFLLVYAGAIAVLVLFVVMMLDVKAIENPWSAKKKRLLYLGGILFLFFLISVGYSEDLQQSMKFFATTYIGSLVLFSFITYEDHLKTIFQPKIVTDNI----------------------EALNDKIVSWKNLCDSENLTEFFRLSFYKENVDSSYCTNNMWFVDFDTSCALNDPSYLLYSTYAILLIIAGVILLIAMVGAITLTLQKNCPESLYRQLGRESKNAVFSIKEKASSRT 252
            +STQNPVYSGLYLVL FFLGSGIAFLLGLEFIALLFLLVYAGAIAVLVLFVVMMLDVKAIENPWSAKKKR+LY+ G+  LF L+ + Y+ +L   +K FA+TYI SLVLFS  TYED++K  FQP I+ + +                      E L+ +I  W  LC++E LTEFFRL F  EN+  SY +N  WF++FD+SCALNDPSYLLYSTYAILLIIAGVILLIAMVGAI+LTLQKNCPESLYRQLGRESKNA+FSIKEK SSR+
Sbjct:   22 TSTQNPVYSGLYLVLTFFLGSGIAFLLGLEFIALLFLLVYAGAIAVLVLFVVMMLDVKAIENPWSAKKKRILYVFGLFLLFSLVLISYNSELLNLIKLFASTYISSLVLFSVSTYEDYIKKNFQPVIIAEAVSNNLIKDKEGIKAEIEINKAVTEILDKRINLWDELCNTEGLTEFFRLLFNNENIKLSYDSNPTWFIEFDSSCALNDPSYLLYSTYAILLIIAGVILLIAMVGAISLTLQKNCPESLYRQLGRESKNAIFSIKEKRSSRS 292          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig7680.16613.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A8D5YZX2_9PHAE7.320e-13279.39NADH-ubiquinone oxidoreductase chain 6 n=1 Tax=Str... [more]
A0A8D5Z5F5_9PHAE2.430e-13078.93NADH-ubiquinone oxidoreductase chain 6 n=2 Tax=Cho... [more]
A0A8D5Z4C0_9PHAE8.300e-12677.39NADH-ubiquinone oxidoreductase chain 6 n=3 Tax=Pun... [more]
A0A3G5FPP4_9PHAE1.030e-12475.19NADH-ubiquinone oxidoreductase chain 6 n=1 Tax=Cla... [more]
A0A8D6BYQ9_9PHAE1.030e-12477.01NADH-ubiquinone oxidoreductase chain 6 n=1 Tax=Eud... [more]
A0A8D5ZBT6_9PHAE1.200e-12377.39NADH-ubiquinone oxidoreductase chain 6 n=1 Tax=Set... [more]
E6ZET2_ECTSI3.920e-12372.36NADH-ubiquinone oxidoreductase chain 6 n=2 Tax=Ect... [more]
A0A089MX86_PETFA6.390e-11870.21NADH-ubiquinone oxidoreductase chain 6 n=1 Tax=Pet... [more]
A0A2H4ZQY9_9PHAE1.050e-11668.71NADH-ubiquinone oxidoreductase chain 6 n=2 Tax=End... [more]
A0A0U1XCQ8_SCYLO1.330e-11368.63NADH-ubiquinone oxidoreductase chain 6 n=1 Tax=Scy... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR042106NADH-ubiquinone/plastoquinone oxidoreductase chain 6, subunit NuoJGENE3D1.20.120.1200coord: 4..131
e-value: 3.4E-20
score: 74.3
IPR001457NADH:ubiquinone/plastoquinone oxidoreductase, chain 6PFAMPF00499Oxidored_q3coord: 5..219
e-value: 4.3E-26
score: 91.4
NoneNo IPR availablePANTHERPTHR33269:SF5NADH-UBIQUINONE OXIDOREDUCTASE CHAIN 6coord: 6..224
NoneNo IPR availablePANTHERPTHR33269FAMILY NOT NAMEDcoord: 6..224
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 31..36
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 119..197
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 12..30
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 37..58
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 222..255
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 99..118
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 198..221
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 59..73
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..11
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 74..92
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 93..98
NoneNo IPR availableTMHMMTMhelixcoord: 37..59
NoneNo IPR availableTMHMMTMhelixcoord: 10..32
NoneNo IPR availableTMHMMTMhelixcoord: 99..118
NoneNo IPR availableTMHMMTMhelixcoord: 199..221
NoneNo IPR availableTMHMMTMhelixcoord: 74..92

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig7680contigL-elsbetiae_contig7680:1718..2485 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig7680.16613.1mRNA_L-elsbetiae_contig7680.16613.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig7680 1718..2485 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig7680.16613.1 ID=prot_L-elsbetiae_contig7680.16613.1|Name=mRNA_L-elsbetiae_contig7680.16613.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=256bp
GFKSSTQNPVYSGLYLVLLFFLGSGIAFLLGLEFIALLFLLVYAGAIAVL
VLFVVMMLDVKAIENPWSAKKKRLLYLGGILFLFFLISVGYSEDLQQSMK
FFATTYIGSLVLFSFITYEDHLKTIFQPKIVTDNIEALNDKIVSWKNLCD
SENLTEFFRLSFYKENVDSSYCTNNMWFVDFDTSCALNDPSYLLYSTYAI
LLIIAGVILLIAMVGAITLTLQKNCPESLYRQLGRESKNAVFSIKEKASS
RTLPC*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR042106Nuo/plastoQ_OxRdtase_6_NuoJ
IPR001457NADH_UbQ/plastoQ_OxRdtase_su6