prot_L-elsbetiae_contig766.16593.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig766.16593.1
Unique Nameprot_L-elsbetiae_contig766.16593.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length624
Homology
BLAST of mRNA_L-elsbetiae_contig766.16593.1 vs. uniprot
Match: D8LBY6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBY6_ECTSI)

HSP 1 Score: 337 bits (864), Expect = 1.380e-105
Identity = 263/529 (49.72%), Postives = 286/529 (54.06%), Query Frame = 0
Query:   66 VYDLFLTAVGLTPRGLGAEAFSPDGSAGQAEEEEFWSAHE--------------------------ESREDGAGAGTAXXXXXXXXXXXXXXXXXXPRTSAGTASATAAPESRA-------------------------GGGEEGRPFEPRQLPAAIA----TDGGVVNRASGATPAAVAAAAATQAGRGAHSRPGDRPTSRTRRRLL-SDAYVGPRHPGGELDGR-TRSTSLSAAAXXXXXXXXXXXXXXXXXXXXXXXXXRTPGSRXXXXXXXXAPRRLNSIRRGNPLFRSGDFGSFWRPNVVAGNATFDDEGDEXXXXXXDALGAGGTRAIERAATNSASAPXXXXXXXXXXXXAAGRPVFSRRGGSSSLDASERGEGGXXXXXXXXXXQGRILFYHKPTLANVPAGDVPDVVPVYLGCPRGNMALGLPLNEAWQGEEHQDTTFNQNLSYTILSWPEEHVQDLLELWRLQALFFATIVFNILLSGLLFFAENPDRTRVEGFATAGAFPEPFQQRSPADDPTGSRSQ 537
            +YDLFLTAVGLTPRGLGAE FSP GS  +AEEEEFWSA                                        XXXXXXXXXXXXXXXXX P   A + SA+A    R                           G     P    Q P+A A    T  G  +    A+   VA A  T  G           T+R RRRLL S+A VGP       D R +RS + SA                            TP              RL   RRGNPLFRSGD GSFWR NV AGNATFDDE D       DA G   TRA+ERA  N  SA              AG     R  G +SLD++ERGEGG          QGRILFYHKPTLANVPAGD+PDVVPVYLGCPRGNMALGLPL+EAW GEEHQDTTFNQNLSYTILSWPE+HVQDLLELWRLQ LFF TI+FNIL+S LLFF ENPDRTRVEGFA  GAFP PF++RSP DDPTG RS+
Sbjct:    1 MYDLFLTAVGLTPRGLGAETFSPGGSGVEAEEEEFWSATXXXXXXXXXXXXXXXXXXXXXXXXXIPRXXXXXXXXXXXXXXXXXXXXXXXXXXXXVPIGGANSYSASAVAGVRGRDTMFTXXXXXXXXXXXXXXXXNSLAGSNRSAPAAGAQRPSAGAEIARTHPGEASDGQDASVDTVADAMCTATGAEG--------TARRRRRLLGSNAAVGPE----SADSRASRSRTFSAT---------------------------TP--------------RL--FRRGNPLFRSGDIGSFWRSNVFAGNATFDDEND----VEEDAAGTA-TRAVERA-INGTSAVTAAATGGHAAAAVAGMEGNGRVAGGNSLDSTERGEGGDGGG------QGRILFYHKPTLANVPAGDIPDVVPVYLGCPRGNMALGLPLDEAWPGEEHQDTTFNQNLSYTILSWPEDHVQDLLELWRLQVLFFTTIIFNILVSALLFFTENPDRTRVEGFARPGAFPRPFEKRSPIDDPTGLRSE 462          
BLAST of mRNA_L-elsbetiae_contig766.16593.1 vs. uniprot
Match: A0A6H5JLJ8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLJ8_9PHAE)

HSP 1 Score: 327 bits (838), Expect = 3.120e-100
Identity = 185/246 (75.20%), Postives = 197/246 (80.08%), Query Frame = 0
Query:  292 IRRGNPLFRSGDFGSFWRPNVVAGNATFDDEGDEXXXXXXDALGAGGTRAIERAATNSASAPXXXXXXXXXXXXAAGRPVFSRRGGSSSLDASERGEGGXXXXXXXXXXQGRILFYHKPTLANVPAGDVPDVVPVYLGCPRGNMALGLPLNEAWQGEEHQDTTFNQNLSYTILSWPEEHVQDLLELWRLQALFFATIVFNILLSGLLFFAENPDRTRVEGFATAGAFPEPFQQRSPADDPTGSRSQ 537
             RRGNPLFRSGD GSFWR NV AGNATFDDE D       DA G G TRA+ERA  N     XXXXXXXXXXXX A      R  G +SLD++ERGEGG          QGRILFYHKPTLANVPAGD+PDVVPVYLGCPRGNMALGLPL+EAWQGEEHQDTTFNQNLSYTILSWPE+HVQDLLELWRLQ LFFATI+FNIL+S LLFF ENPDRTRVEGFA +GAFP PF+QRSP DDPTG RS+
Sbjct:  291 FRRGNPLFRSGDIGSFWRSNVFAGNATFDDEND----VEEDAAGTG-TRAVERA-VNXXXXXXXXXXXXXXXXXVADVERNDRVAGCNSLDSTERGEGGDGGG------QGRILFYHKPTLANVPAGDIPDVVPVYLGCPRGNMALGLPLDEAWQGEEHQDTTFNQNLSYTILSWPEDHVQDLLELWRLQVLFFATIIFNILVSALLFFTENPDRTRVEGFARSGAFPRPFEQRSPTDDPTGLRSE 524          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig766.16593.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LBY6_ECTSI1.380e-10549.72Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JLJ8_9PHAE3.120e-10075.20Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 539..556
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 482..501
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 605..623
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..481
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 563..580
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 581..585
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 586..604
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 557..562
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 502..538
NoneNo IPR availableTMHMMTMhelixcoord: 482..501
NoneNo IPR availableTMHMMTMhelixcoord: 586..605
NoneNo IPR availableTMHMMTMhelixcoord: 554..576

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig766contigL-elsbetiae_contig766:25675..29820 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig766.16593.1mRNA_L-elsbetiae_contig766.16593.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig766 25462..30288 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig766.16593.1 ID=prot_L-elsbetiae_contig766.16593.1|Name=mRNA_L-elsbetiae_contig766.16593.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=624bp
MYRAPAPPQPTSGGNPNSNSSGSGGGGPSSLSPPAVPSGEAVAERGPSSP
PRSAQAGGGGGGGGSVYDLFLTAVGLTPRGLGAEAFSPDGSAGQAEEEEF
WSAHEESREDGAGAGTAGAGEALHGSSFAAPALARPRTSAGTASATAAPE
SRAGGGEEGRPFEPRQLPAAIATDGGVVNRASGATPAAVAAAAATQAGRG
AHSRPGDRPTSRTRRRLLSDAYVGPRHPGGELDGRTRSTSLSAAAVVAGT
ARRRRLFRNNTTASASESESRTPGSRTPSAAAAAAPRRLNSIRRGNPLFR
SGDFGSFWRPNVVAGNATFDDEGDEDDDDDGDALGAGGTRAIERAATNSA
SAPTAAVTDAGADAGAAGRPVFSRRGGSSSLDASERGEGGGDGSGGAGGG
QGRILFYHKPTLANVPAGDVPDVVPVYLGCPRGNMALGLPLNEAWQGEEH
QDTTFNQNLSYTILSWPEEHVQDLLELWRLQALFFATIVFNILLSGLLFF
AENPDRTRVEGFATAGAFPEPFQQRSPADDPTGSRSQEWHLTAALLLSVV
GMVCVLARLPAGVALYLVLTVVNAVVGLGQSPDPLFAIRYAVDVVLVVMG
RTLLSSMTYTWVTASAGDGRRAA*
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