prot_L-elsbetiae_contig7648.16576.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_L-elsbetiae_contig7648.16576.1
Unique Name	prot_L-elsbetiae_contig7648.16576.1
Type	polypeptide
Organism	Laminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length	349

Homology

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BLAST of mRNA_L-elsbetiae_contig7648.16576.1 vs. uniprot
Match: D7FQY7_ECTSI (Ubiquitin-conjugating enzyme n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQY7_ECTSI)

HSP 1 Score: 415 bits (1066), Expect = 1.560e-142
Identity = 220/301 (73.09%), Postives = 241/301 (80.07%), Query Frame = 0

Query:   49 IAHSRRSCGLDHHEAQACNSGWPTTQKPKTGSYERSPSNSISSKVDALQTLALDVRGGGGGSSEEASVMTLFIRVLVPGFGREKNKDGELDLEGGGLVRRLKRLVSGVLRTMRRSPASAGTEGGE-ENIKAKKXXXXXXXXAATASHLEKTYRPGNANYRIQKELKEFMANPPDCCKVSVGKNIRVWIITISGAEGTIYAGEKFRLRVAFPDDYPTKPPAVYFLQSPPPPKHQHIYTNGDICLSLLSPRDWKPSLTVMSLALSILSMLSSAKEKRNPEDNASHAEARPGQAQQWIYHDDIC 348
            +AH RRS  L    A++CN G PTTQ  ++G  E           DAL+T AL VRGG   S E+ S+ TLF+RVL+PGF R+K  DGELDLEGGGL+RRLKRLVSGV R +R SP       GE +N+  KK        A T SHLEKTYRPGNANYRIQKELKEFMANPPDCCKVSVGKNIRVWIITISGAEGTIYAGEKFRLRV+FP++YPTKPPAVYFLQSPPPPKHQHIYTNGDICLSLLS RDWKP+LTVMSLALSILSMLSSAKEKR PEDNA+HAEARPGQAQQWIYHDD+C
Sbjct:   33 LAHGRRSSALTSSNARSCNPG-PTTQG-ESGHGE-----------DALETFALVVRGG---SDEDPSLTTLFMRVLMPGFRRDKGGDGELDLEGGGLMRRLKRLVSGVFRKVRGSPVPITEPKGEAKNVATKKKSKGKAKGATTTSHLEKTYRPGNANYRIQKELKEFMANPPDCCKVSVGKNIRVWIITISGAEGTIYAGEKFRLRVSFPEEYPTKPPAVYFLQSPPPPKHQHIYTNGDICLSLLSSRDWKPNLTVMSLALSILSMLSSAKEKRLPEDNATHAEARPGQAQQWIYHDDLC 317

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BLAST of mRNA_L-elsbetiae_contig7648.16576.1 vs. uniprot
Match: A0A835ZFF1_9STRA (Ubiquitin-conjugating enzyme/RWD-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZFF1_9STRA)

HSP 1 Score: 254 bits (648), Expect = 1.470e-78
Identity = 135/253 (53.36%), Postives = 177/253 (69.96%), Query Frame = 0

Query:  101 LDVRGGGGGSSEEASVMTLFIRVLVPGFGREK---NKDGELDLEGG--GLVRRLKRLVSGVLRTMRRSPASAGTEGGEENIKAKKXXXXXXXXAATASHLEKTYRPGNANYRIQKELKEFMANPPDCCKVSVGKNIRVWIITISGAEGTIYAGEKFRLRVAFPDDYPTKPPAVYFLQSPPPPKHQHIYTNGDICLSLLSPRDWKPSLTVMSLALSILSMLSSAKEKRNPEDNASHAEARPGQAQQ-WIYHDDI 347
            L +RGGG GS    S   LF+++ +PG+G +    + DG+  L     GL +R+KR +S +    ++ P   G +GG+    + K             HL   +RPG+ANYRIQKEL+EFM NPP+ C+VSVGK+++VWIITI+GA+GTI+ GEKF+LRV FP++YP KPP+VYFLQ PPPP+H+H+YTNGDICLSLL  +DW P+LT  +LALSILSMLSSAKEKR P DN  +A  RPGQ+Q  WIYHD+ 
Sbjct:  127 LMLRGGGKGS---LSKFQLFMQIFIPGYGEDAAGDDGDGKAALTSAQPGLAKRVKRFLSALFSGGKKQPTK-GAKGGKGKGGSSKDD-------TVGKHLASKHRPGDANYRIQKELQEFMKNPPEGCQVSVGKSLKVWIITITGAKGTIFEGEKFKLRVGFPENYPLKPPSVYFLQDPPPPEHEHVYTNGDICLSLLG-KDWTPNLTASALALSILSMLSSAKEKRRPADNFQNANRRPGQSQDSWIYHDNF 367

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BLAST of mRNA_L-elsbetiae_contig7648.16576.1 vs. uniprot
Match: A0A0G4GQN8_VITBC (UBC core domain-containing protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4GQN8_VITBC)

HSP 1 Score: 217 bits (552), Expect = 2.600e-66
Identity = 101/160 (63.12%), Postives = 128/160 (80.00%), Query Frame = 0

Query:  190 ATASHLEKTYRPGNANYRIQKELKEFMANPPDCCKVSVGKNIRVWIITISGAEGTIYAGEKFRLRVAFPDDYPTKPPAVYFLQSPPPPKHQHIYTNGDICLSLLSPRDWKPSLTVMSLALSILSMLSSAKEKRNPEDNASHAEARPG-QAQQWIYHDDIC 348
            A   HL +++RPG+ NYRIQKELK+F+  PPD C+++VG NIRVWIIT++G EGT+Y GEK+RL++ FP +YP KPP +YFLQ  P P+H H+Y+NGDICL+LL   DWKP+LTV S+ALSILSMLSSAKEK+ P DNASHA+ + G Q   W+YHDD C
Sbjct:   50 AAKDHLRRSFRPGHVNYRIQKELKDFLTTPPDHCEIAVGSNIRVWIITLTGVEGTLYEGEKYRLKIVFPPEYPLKPPIIYFLQ--PTPRHPHVYSNGDICLNLLGT-DWKPTLTVASVALSILSMLSSAKEKKLPLDNASHADLKAGGQQHNWMYHDDKC 206

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BLAST of mRNA_L-elsbetiae_contig7648.16576.1 vs. uniprot
Match: A0A0G4GVI6_9ALVE (UBC core domain-containing protein n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4GVI6_9ALVE)

HSP 1 Score: 212 bits (539), Expect = 2.070e-64
Identity = 102/160 (63.75%), Postives = 127/160 (79.38%), Query Frame = 0

Query:  190 ATASHLEKTYRPGNANYRIQKELKEFMANPPDCCKVSVGKNIRVWIITISGAEGTIYAGEKFRLRVAFPDDYPTKPPAVYFLQSPPPPKHQHIYTNGDICLSLLSPRDWKPSLTVMSLALSILSMLSSAKEKRNPEDNASHAEARPG-QAQQWIYHDDIC 348
            AT++HL+  + PGN NYRIQKELKEF+ +PP  C+VSVG N+R WIITI G EGT+Y  E ++L+V FPD+YP  PP+VYFL+  P P+H H+YTNGDICL+LL   DWKP+LTV ++AL+ILSMLSSAKEK+ P DNA+HAEA PG Q   W+YHDD C
Sbjct:   46 ATSNHLKAKWTPGNPNYRIQKELKEFIKSPPPNCRVSVGSNLRAWIITIKGVEGTLYEKETYKLKVVFPDEYPLVPPSVYFLR--PAPRHPHVYTNGDICLNLLGT-DWKPTLTVSAIALAILSMLSSAKEKKIPLDNAAHAEAPPGGQQHNWMYHDDKC 202

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BLAST of mRNA_L-elsbetiae_contig7648.16576.1 vs. uniprot
Match: A0A7S1TYR4_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TYR4_9STRA)

HSP 1 Score: 207 bits (528), Expect = 3.330e-62
Identity = 102/153 (66.67%), Postives = 123/153 (80.39%), Query Frame = 0

Query:  195 LEKTYRPGNANYRIQKELKEFMANPPDCCKVSVGKNIRVWIITISGAEGTIYAGEKFRLRVAFPDDYPTKPPAVYFLQSPPPPKHQHIYTNGDICLSLLSPRDWKPSLTVMSLALSILSMLSSAKEKRNPEDNASHAEARPGQAQQ-WIYHDD 346
            L K  + GN  YRIQKEL+EF+ NPP  CKVSVG NIRVW +T++GAE T+Y GE+++LRV FP  YPTKPP+VYFL+  PPPKH H+YTNGDICLSLL  +DW+P+LT  SLALSILSMLSSA+EKR P DNA HA++ PG+ Q  W+YHDD
Sbjct:   91 LGKRVKRGNPLYRIQKELREFVDNPPPNCKVSVGDNIRVWTVTLTGAEDTLYEGEEYKLRVTFPTGYPTKPPSVYFLK--PPPKHPHVYTNGDICLSLLG-KDWRPNLTASSLALSILSMLSSAREKRLPNDNAQHADSPPGKPQDGWMYHDD 240

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BLAST of mRNA_L-elsbetiae_contig7648.16576.1 vs. uniprot
Match: W7U274_9STRA (Ubiquitin-conjugating enzyme n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U274_9STRA)

HSP 1 Score: 209 bits (532), Expect = 7.340e-62
Identity = 97/156 (62.18%), Postives = 130/156 (83.33%), Query Frame = 0

Query:  194 HLEKTYRPGNANYRIQKELKEFMANPPDCCKVSVGKNIRVWIITISGAEGTIYAGEKFRLRVAFPDDYPTKPPAVYFLQSPPPPKHQHIYTNGDICLSLLSPRDWKPSLTVMSLALSILSMLSSAKEKRNPEDNASHAEARPGQAQ-QWIYHDDIC 348
            HL K +R GNAN+R+QKEL+E++ANP +  +V+VG NIRVW++T++GA+GTI+AGEK++L+  FP DYP+KPP+VYFLQ  PPP+H+H+YTNGDICL+LL  RDW+P++T   LALSILSMLSSA+EK+ P+DN  HA+  PG+ Q  W+YHDD C
Sbjct:  162 HLGKEFRRGNANFRVQKELREWLANPTENLQVAVGDNIRVWVVTLTGAKGTIFAGEKYKLKFTFPMDYPSKPPSVYFLQ--PPPRHEHVYTNGDICLNLLG-RDWRPNMTASMLALSILSMLSSAREKKIPQDNHVHADNPPGKEQANWLYHDDRC 314

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BLAST of mRNA_L-elsbetiae_contig7648.16576.1 vs. uniprot
Match: A0A7S2R2N4_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2R2N4_9STRA)

HSP 1 Score: 198 bits (504), Expect = 4.730e-59
Identity = 97/161 (60.25%), Postives = 122/161 (75.78%), Query Frame = 0

Query:  189 AATASHLEKTYRPGNANYRIQKELKEFMANPPDCCKVSVGKNIRVWIITISGAEGTIYAGEKFRLRVAFPDDYPTKPPAVYFLQSPPPPKHQHIYTNGDICLSLLSPRDWKPSLTVMSLALSILSMLSSAKEKRNPEDNASHAEARPGQAQQ-WIYHDDIC 348
            +A A H+ K  +  N NYRIQ+ELKEF+ +PP   KV+VGKNIRVWIIT+ GA+ TIY G+KFRLRV FP DYPT PP+VYFLQ  P P+H+H+YTNGDICLSLL  +DW+P++T  S+A+SILS+LS A+ K  P DNA +   +PG  Q  W+YHDD C
Sbjct:   52 SAAAVHIAKELKSNNPNYRIQRELKEFLKSPPPNLKVNVGKNIRVWIITLIGAKNTIYDGDKFRLRVQFPADYPTSPPSVYFLQ--PTPRHEHVYTNGDICLSLLG-KDWRPTMTAQSIAMSILSILSGAQRKSLPMDNARNCLNKPGAKQDDWVYHDDNC 209

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BLAST of mRNA_L-elsbetiae_contig7648.16576.1 vs. uniprot
Match: A0A7S4RNY0_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4RNY0_9STRA)

HSP 1 Score: 199 bits (506), Expect = 1.440e-57
Identity = 96/156 (61.54%), Postives = 122/156 (78.21%), Query Frame = 0

Query:  194 HLEKTYRPGNANYRIQKELKEFMANPPDCCKVSVGKNIRVWIITISGAEGTIYAGEKFRLRVAFPDDYPTKPPAVYFLQSPPPPKHQHIYTNGDICLSLLSPRDWKPSLTVMSLALSILSMLSSAKEKRNPEDNASHAEARPGQAQQ-WIYHDDIC 348
            HL    +  + NYRIQKEL+ F+ +PP    V+VGKNIRVWI+TI+GA  TIY GEK+RLR++FP +YPT PP+VYFL  PP PKH+H+YTNGDICLSLL  +DW+P++T  SLA+SILS+LSSA+EK  P DNA+H++ +PG  Q  WIYHDD C
Sbjct:  196 HLSAKLKSNSPNYRIQKELRAFLTSPPPNLSVAVGKNIRVWIVTITGASNTIYEGEKYRLRMSFPSNYPTSPPSVYFL--PPTPKHEHVYTNGDICLSLLG-KDWRPTMTGQSLAVSILSLLSSAREKSLPMDNAAHSQNKPGGNQDNWIYHDDNC 348

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BLAST of mRNA_L-elsbetiae_contig7648.16576.1 vs. uniprot
Match: A0A7S4A863_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4A863_9STRA)

HSP 1 Score: 197 bits (501), Expect = 3.500e-57
Identity = 121/261 (46.36%), Postives = 160/261 (61.30%), Query Frame = 0

Query:   95 ALQTLALDVRGGGGGSSEEASVMTLFIRVLVPGFGREKNKDGELDLEGGGLVRRLKRLVSGVLRTMRRSPA--SAGTEGGEENI----KAKKXXXXXXXXAATASHLEKTYRPGNANYRIQKELKEFMANPPDCCKVSVGKNIRVWIITISGAEGTIYAGEKFRLRVAFPDDYPTKPPAVYFLQSPPPPKHQHIYTNGDICLSLLSPRDWKPSLTVMSLALSILSMLSSAKEKRNPEDNASHAEARPGQAQQ-WIYHDDIC 348
            A+ T AL V GG   +S            L P     + K G LD  GGG +    RL   + +T+R +      G +GG+E+     K K          A AS  ++  +      RI +EL +F+ NPPD CKVSVGKN+ VWI+T++GAEGTI+AGEK++LRV+FP DYPT PP+ YFL+  P P+H H+YTNGDICL+LL    W+P++TV  L+LSILSMLSSAK K  P+DNA HA + PG+ Q+ W+YHDD C
Sbjct:   86 AMHTRALRVSGGANATS------------LAP-----EAKAGLLDGGGGGSL--ATRLFGVIRKTVRMTLRLLGFGKDGGDEDTAPATKKKVAAKKKRRSPARASPAQRQAQ------RISRELTDFVENPPDGCKVSVGKNLNVWIVTMTGAEGTIFAGEKYKLRVSFPADYPTSPPSCYFLE--PTPRHPHVYTNGDICLNLLG-NGWRPTITVAQLSLSILSMLSSAKTKGIPQDNAVHAASAPGKPQEGWMYHDDSC 318

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BLAST of mRNA_L-elsbetiae_contig7648.16576.1 vs. uniprot
Match: A0A6U3E3N1_9STRA (Hypothetical protein n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A6U3E3N1_9STRA)

HSP 1 Score: 192 bits (488), Expect = 1.020e-56
Identity = 92/156 (58.97%), Postives = 123/156 (78.85%), Query Frame = 0

Query:  194 HLEKTYRPGNANYRIQKELKEFMANPPDCCKVSVGKNIRVWIITISGAEGTIYAGEKFRLRVAFPDDYPTKPPAVYFLQSPPPPKHQHIYTNGDICLSLLSPRDWKPSLTVMSLALSILSMLSSAKEKRNPEDNASHAEARPGQAQQ-WIYHDDIC 348
            H++K  +  + NYRIQ+ELK F+++PP   KV VGKNIRVWI+T+SGA+ TIY GE F+LR+AFP  YPT PP+VYFL  P  P H+H+YTNGDICLSLL  +DW+P++T  S+A+SILS+LSSA+ K  P DNA H++ +PG+ Q+ W+YHDD+C
Sbjct:   51 HVKKELKATSPNYRIQRELKSFLSDPPPNLKVKVGKNIRVWIVTMSGAKDTIYEGETFQLRIAFPAAYPTVPPSVYFLP-PNIPLHEHVYTNGDICLSLLG-KDWRPTMTAQSIAVSILSILSSAQSKSLPMDNARHSQNKPGEYQKDWVYHDDLC 204

The following BLAST results are available for this feature:

BLAST of mRNA_L-elsbetiae_contig7648.16576.1 vs. uniprot

BLAST of mRNA_L-elsbetiae_contig7648.16576.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D7FQY7_ECTSI	1.560e-142	73.09	Ubiquitin-conjugating enzyme n=1 Tax=Ectocarpus si...	[more]
A0A835ZFF1_9STRA	1.470e-78	53.36	Ubiquitin-conjugating enzyme/RWD-like protein n=1 ...	[more]
A0A0G4GQN8_VITBC	2.600e-66	63.13	UBC core domain-containing protein n=1 Tax=Vitrell...	[more]
A0A0G4GVI6_9ALVE	2.070e-64	63.75	UBC core domain-containing protein n=1 Tax=Chromer...	[more]
A0A7S1TYR4_9STRA	3.330e-62	66.67	Hypothetical protein n=1 Tax=Phaeomonas parva TaxI...	[more]
W7U274_9STRA	7.340e-62	62.18	Ubiquitin-conjugating enzyme n=2 Tax=Monodopsidace...	[more]
A0A7S2R2N4_9STRA	4.730e-59	60.25	Hypothetical protein n=1 Tax=Eucampia antarctica T...	[more]
A0A7S4RNY0_9STRA	1.440e-57	61.54	Hypothetical protein n=1 Tax=Ditylum brightwellii ...	[more]
A0A7S4A863_9STRA	3.500e-57	46.36	Hypothetical protein n=2 Tax=Pelagomonas calceolat...	[more]
A0A6U3E3N1_9STRA	1.020e-56	58.97	Hypothetical protein n=1 Tax=Amphiprora paludosa T...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	SMART	SM00212	ubc_7	coord: 206..347 e-value: 1.2E-27 score: 107.8
None	No IPR available	PANTHER	PTHR24068	FAMILY NOT NAMED	coord: 171..340
None	No IPR available	PANTHER	PTHR24068:SF148		coord: 171..340
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_H_REGION	Signal peptide H-region	coord: 3..14
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_C_REGION	Signal peptide C-region	coord: 15..26
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_N_REGION	Signal peptide N-region	coord: 1..2
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 27..348
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE	Signal Peptide	coord: 1..26
None	No IPR available	SIGNALP_EUK	SignalP-noTM	SignalP-noTM	coord: 1..21 score: 0.777
None	No IPR available	TMHMM	TMhelix		coord: 7..29
IPR000608	Ubiquitin-conjugating enzyme E2	PFAM	PF00179	UQ_con	coord: 207..328 e-value: 8.8E-29 score: 99.9
IPR000608	Ubiquitin-conjugating enzyme E2	PROSITE	PS50127	UBIQUITIN_CONJUGAT_2	coord: 206..326 score: 25.397
IPR016135	Ubiquitin-conjugating enzyme/RWD-like	GENE3D	3.10.110.10		coord: 203..348 e-value: 1.5E-42 score: 146.7
IPR016135	Ubiquitin-conjugating enzyme/RWD-like	SUPERFAMILY	54495	UBC-like	coord: 194..327

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
L-elsbetiae_contig7648	contig	L-elsbetiae_contig7648:4143..8272 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW15	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_L-elsbetiae_contig7648.16576.1	mRNA_L-elsbetiae_contig7648.16576.1	Laminarionema elsbetiae ELsaHSoW15	mRNA	L-elsbetiae_contig7648 3685..9472 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_L-elsbetiae_contig7648.16576.1 ID=prot_L-elsbetiae_contig7648.16576.1|Name=mRNA_L-elsbetiae_contig7648.16576.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=349bp
MMGFGPTLAFLLLVSPFNVVANVVAAAVAGHGRASPTLGSTNAGAERTIA
HSRRSCGLDHHEAQACNSGWPTTQKPKTGSYERSPSNSISSKVDALQTLA
LDVRGGGGGSSEEASVMTLFIRVLVPGFGREKNKDGELDLEGGGLVRRLK
RLVSGVLRTMRRSPASAGTEGGEENIKAKKKGKGKGKGAATASHLEKTYR
PGNANYRIQKELKEFMANPPDCCKVSVGKNIRVWIITISGAEGTIYAGEK
FRLRVAFPDDYPTKPPAVYFLQSPPPPKHQHIYTNGDICLSLLSPRDWKP
SLTVMSLALSILSMLSSAKEKRNPEDNASHAEARPGQAQQWIYHDDIC*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR000608	UBQ-conjugat_E2
IPR016135	UBQ-conjugating_enzyme/RWD