prot_L-elsbetiae_contig7636.16561.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig7636.16561.1
Unique Nameprot_L-elsbetiae_contig7636.16561.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length176
Homology
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BLAST of mRNA_L-elsbetiae_contig7636.16561.1 vs. uniprot
Match: D7FUL1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUL1_ECTSI)

HSP 1 Score: 155 bits (392), Expect = 1.380e-40
Identity = 85/179 (47.49%), Postives = 115/179 (64.25%), Query Frame = 0 
Query:    1 MSRYEWVEQ---CSEDVWSPCRESTVVGATPEDDFTGP-PDIPRLKTKMGQVLFGMSRHASISVLEPREGTLVAARRNNAQESSNDWAQLNLLVKVNHPWFRTPADGLWCILLDGVEIGCRGD-DDGDSAKFSSSLNLTVEVDIRALPRRATLEAIIRGGLLGVAAVVTRSPPVSVSIW 174
            + RYEWVE    C E    P    +  G   E+      P + RLK K+ Q LF +SRHA+IS+LEPREGT+ AA R+  +E + DWAQL L VKV HP+FRTP DG+WC+LL+ VE+GCRGD D  +   +S ++  TVE+D   LPRR  L+ + +GG +    V+ +SPP+SV+IW
Sbjct:  805 LDRYEWVEHLGGCGEGRSCPGSVPSEGGCFAEETRGKTCPSVSRLKNKIEQTLFRVSRHATISMLEPREGTVFAAERSE-REGAGDWAQLRLRVKVVHPYFRTPDDGMWCVLLEDVEVGCRGDYDSRERGGYSHAV--TVEIDPVVLPRRCRLQVVTKGGGVETPRVLNKSPPISVTIW 980
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig7636.16561.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FUL1_ECTSI1.380e-4047.49Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig7636contigL-elsbetiae_contig7636:1369..7571 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig7636.16561.1mRNA_L-elsbetiae_contig7636.16561.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig7636 218..7972 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig7636.16561.1 ID=prot_L-elsbetiae_contig7636.16561.1|Name=mRNA_L-elsbetiae_contig7636.16561.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=176bp
MSRYEWVEQCSEDVWSPCRESTVVGATPEDDFTGPPDIPRLKTKMGQVLF
GMSRHASISVLEPREGTLVAARRNNAQESSNDWAQLNLLVKVNHPWFRTP
ADGLWCILLDGVEIGCRGDDDGDSAKFSSSLNLTVEVDIRALPRRATLEA
IIRGGLLGVAAVVTRSPPVSVSIWV*
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