prot_L-elsbetiae_contig7634.16558.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig7634.16558.1
Unique Nameprot_L-elsbetiae_contig7634.16558.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length220
Homology
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BLAST of mRNA_L-elsbetiae_contig7634.16558.1 vs. uniprot
Match: A0A6H5KRA3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRA3_9PHAE)

HSP 1 Score: 184 bits (467), Expect = 2.880e-51
Identity = 110/229 (48.03%), Postives = 134/229 (58.52%), Query Frame = 0 
Query:    9 GVEVKPDAEKLVKVE------------TSNNGAKIAEAFAL----------GANSREVSDEQVYRDPAPLKWRIFEVVAKANGQRAFGTYWSALRDFMHGWLGRGELDDVLNSCLGADNVHLHNELILCLLHNARCRYLPAELVSQVPASSRGKVVHAAVK-------------------------PHSSRAALPXXXXXXXXAALSGTSAASSPFQGKRTEGLLSNAD 190
            G+ +  ++++LVKVE            ++++G  +AEA A           G     V+DE +Y+DP  LKW+IFE VAKANGQRAF TYWSALRDFMHGWL RG LD+ L++ LGADN+HLHNELILCLL+NARCRYLPA+LVSQVPAS RGKVVH                             P        XX         +  +AAS PFQGKR EGLL NA+
Sbjct:   10 GIIIGKNSDRLVKVEQPTVPRSSNTGSSADHGVSMAEAVAAELAAAETGGTGGGQNAVTDEHLYQDPGSLKWKIFEAVAKANGQRAFETYWSALRDFMHGWLSRGGLDEALDASLGADNLHLHNELILCLLNNARCRYLPADLVSQVPASFRGKVVHTTAXXXXXXXXXXXXXXXXXXXXXXXXXXPVLXXXXXXXXPPCGNSGLSNAAAAASLPFQGKRAEGLLLNAE 238
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BLAST of mRNA_L-elsbetiae_contig7634.16558.1 vs. uniprot
Match: D8LER5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LER5_ECTSI)

HSP 1 Score: 180 bits (456), Expect = 1.180e-49
Identity = 103/196 (52.55%), Postives = 117/196 (59.69%), Query Frame = 0 
Query:   32 AEAFALGANSREVSDEQVYRDPAPLKWRIFEVVAKANGQRAFGTYWSALRDFMHGWLGRGELDDVLNSCLGADNVHLHNELILCLLHNARCRYLPAELVSQVPASSRGKVVHAAVKPHSSRA-------------ALPXXXXXXXXAALSGTSA------------------------ASSPFQGKRTEGLLSNAD 190
            AE    G     V+DE +Y+DPA LKW+IFE VAKANGQRAF TYWSALRDFMHGWL RG LD+ L++ LGADN+HLHNELILCLL+NARCRYLPA+LVSQVPAS RGKVVH                       A+P         + SG+S                         AS PFQGKR EGLL NA+
Sbjct:   12 AETGGTGGGQNAVTDEHLYQDPASLKWKIFEAVAKANGQRAFETYWSALRDFMHGWLPRGGLDEALDASLGADNLHLHNELILCLLNNARCRYLPADLVSQVPASFRGKVVHTTXXXXXXXXXXXXXXXXXXXXXAIPRRPVPVLNGSNSGSSPCGKSGLSNGSXXXXXXXXXXXXXXASLPFQGKRAEGLLLNAE 207
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig7634.16558.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KRA3_9PHAE2.880e-5148.03Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LER5_ECTSI1.180e-4952.55Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR024738Transcriptional coactivator Hfi1/Transcriptional adapter 1PFAMPF12767SAGA-Tad1coord: 69..138
e-value: 4.3E-13
score: 49.6
IPR024738Transcriptional coactivator Hfi1/Transcriptional adapter 1PANTHERPTHR21277FAMILY NOT NAMEDcoord: 72..175

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig7634contigL-elsbetiae_contig7634:2756..4937 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig7634.16558.1mRNA_L-elsbetiae_contig7634.16558.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig7634 2706..4937 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig7634.16558.1 ID=prot_L-elsbetiae_contig7634.16558.1|Name=mRNA_L-elsbetiae_contig7634.16558.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=220bp
MDGKKTLGGVEVKPDAEKLVKVETSNNGAKIAEAFALGANSREVSDEQVY
RDPAPLKWRIFEVVAKANGQRAFGTYWSALRDFMHGWLGRGELDDVLNSC
LGADNVHLHNELILCLLHNARCRYLPAELVSQVPASSRGKVVHAAVKPHS
SRAALPPPPPSASKAALSGTSAASSPFQGKRTEGLLSNADRHPAAANGGG
RGFAAGSNGASHAGRGAATA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR024738Hfi1/Tada1