prot_L-elsbetiae_contig760.16516.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig760.16516.1
Unique Nameprot_L-elsbetiae_contig760.16516.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length182
Homology
BLAST of mRNA_L-elsbetiae_contig760.16516.1 vs. uniprot
Match: A0A6H5KE74_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KE74_9PHAE)

HSP 1 Score: 204 bits (520), Expect = 1.150e-57
Identity = 115/167 (68.86%), Postives = 132/167 (79.04%), Query Frame = 0
Query:   16 AGPGGYPGAFVMGSGGRPGGAKGRGRVFGTPLKELVLNPDRCRRGVLDPTLGVPDAVLSLIEALSEENCRDTPGLFVREASEADLIKVVKSLDRSNCVPGGCSDGISTSASYSASPAWLVSRLTGGXXXXXSRGVAQEKSGESKGKGGHGGVSPHALASALVYFLHR 182
            AG GGYPGAFVMG  GR GGAKGRGRVFG PL++LVLNP+RCRRG LDP LGVPDAVLSLIEALSEE CR++PGLF+REA E +L+KVVKSLD++N +PG    G   S   S+SPAWLVSRLTGG       G A+E+  +S GKG  G VSPHA+A+ALVYFLHR
Sbjct:  489 AGAGGYPGAFVMG--GRRGGAKGRGRVFGVPLEDLVLNPERCRRGTLDPALGVPDAVLSLIEALSEEGCRNSPGLFLREADETELVKVVKSLDKANTLPGRRGGG--RSGDSSSSPAWLVSRLTGG-----GEGTAEEE--KSGGKGALG-VSPHAVANALVYFLHR 643          
BLAST of mRNA_L-elsbetiae_contig760.16516.1 vs. uniprot
Match: D8LHU4_ECTSI (Rap2 interacting protein x isoform 3 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHU4_ECTSI)

HSP 1 Score: 202 bits (514), Expect = 7.350e-57
Identity = 113/167 (67.66%), Postives = 130/167 (77.84%), Query Frame = 0
Query:   16 AGPGGYPGAFVMGSGGRPGGAKGRGRVFGTPLKELVLNPDRCRRGVLDPTLGVPDAVLSLIEALSEENCRDTPGLFVREASEADLIKVVKSLDRSNCVPGGCSDGISTSASYSASPAWLVSRLTGGXXXXXSRGVAQEKSGESKGKGGHGGVSPHALASALVYFLHR 182
            AG GGYPGAFVMG  GR GGAKGRGRVFG PL++LVLNP+RCRRG LDP LGVPDAVLSLIEALSEE CR++PGLF+REA E +L+KVVKSLD++N +PG    G  +S S ++SPAWLVSRLTGG       G A+E   E  G  G  GVSP A+A+ALVYFLHR
Sbjct:  468 AGAGGYPGAFVMG--GRRGGAKGRGRVFGVPLEDLVLNPERCRRGTLDPALGVPDAVLSLIEALSEEGCRNSPGLFLREADETELVKVVKSLDKANTLPGRRGGG--SSGSSASSPAWLVSRLTGG-----GEGTAEE---EKSGGRGALGVSPQAVATALVYFLHR 622          
BLAST of mRNA_L-elsbetiae_contig760.16516.1 vs. uniprot
Match: A0A836CLX4_9STRA (TLD-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CLX4_9STRA)

HSP 1 Score: 60.5 bits (145), Expect = 2.070e-7
Identity = 44/146 (30.14%), Postives = 59/146 (40.41%), Query Frame = 0
Query:   37 KGRGRVFGTPLKELVLNPDRCRRGVLDPTLGVPDAVLSLIEALSEENCRDTPGLFVREASEADLIKVVKSLDRSNCVPGGCSDGISTSASYSASPAWLVSRLTGGXXXXXSRGVAQEKSGESKGKGGHGGVSPHALASALVYFLHR 182
            + R  VFG  L+EL  +P R    +LD    +PDA+ SL+ ALS       PGLF   A+  +++ V K+L+  N VP                                               GG   VS HALA+AL+ FLHR
Sbjct:  297 RSRDTVFGVDLEELFCSPRRSAGAMLDAAAELPDALASLLAALSHPLVLSEPGLFQVAAAPGEVLTVTKALNAGNAVPVDA--------------------------------------------GGSSLVSAHALAAALLLFLHR 398          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig760.16516.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5KE74_9PHAE1.150e-5768.86Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LHU4_ECTSI7.350e-5767.66Rap2 interacting protein x isoform 3 n=1 Tax=Ectoc... [more]
A0A836CLX4_9STRA2.070e-730.14TLD-domain-containing protein n=1 Tax=Tribonema mi... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig760contigL-elsbetiae_contig760:29364..31563 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig760.16516.1mRNA_L-elsbetiae_contig760.16516.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig760 29364..31563 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig760.16516.1 ID=prot_L-elsbetiae_contig760.16516.1|Name=mRNA_L-elsbetiae_contig760.16516.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=182bp
RSSPGHGGVATAAAGAGPGGYPGAFVMGSGGRPGGAKGRGRVFGTPLKEL
VLNPDRCRRGVLDPTLGVPDAVLSLIEALSEENCRDTPGLFVREASEADL
IKVVKSLDRSNCVPGGCSDGISTSASYSASPAWLVSRLTGGGGGGGSRGV
AQEKSGESKGKGGHGGVSPHALASALVYFLHR
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