prot_L-elsbetiae_contig760.16510.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig760.16510.1
Unique Nameprot_L-elsbetiae_contig760.16510.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length119
Homology
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BLAST of mRNA_L-elsbetiae_contig760.16510.1 vs. uniprot
Match: A0A6H5KEN8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEN8_9PHAE)

HSP 1 Score: 55.1 bits (131), Expect = 2.450e-6
Identity = 47/109 (43.12%), Postives = 57/109 (52.29%), Query Frame = 0 
Query:    9 RQLDLASSFKAGQRAQSDSARKRSRTAADAXXXXXXXXXXXXXXTQIEAATAHHA-GRPSERRTMSRGDLGGIGVSEAGDDLGVSPGSTDVLTKRKAGDDAVGAGAPYR 116
            RQLDLASSFKAG  A S+S R+ +     A              ++  A     A  +PSE   M RG+LG IGVSEAGDDLG+ P +     KRKAG D  G   P +
Sbjct:  100 RQLDLASSFKAG--ALSESTRQGNTLIWLAWGWAAEYCHFVAGASRGGAGGGGAAKAKPSEG--MDRGELGAIGVSEAGDDLGI-PTAPGRPAKRKAGSDTAGTSTPAK 203
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig760.16510.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5KEN8_9PHAE2.450e-643.12Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig760contigL-elsbetiae_contig760:7098..9729 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig760.16510.1mRNA_L-elsbetiae_contig760.16510.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig760 7098..9729 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig760.16510.1 ID=prot_L-elsbetiae_contig760.16510.1|Name=mRNA_L-elsbetiae_contig760.16510.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=119bp
GAYGSGGGRQLDLASSFKAGQRAQSDSARKRSRTAADAAAAAEGGSRGGG
GTTQIEAATAHHAGRPSERRTMSRGDLGGIGVSEAGDDLGVSPGSTDVLT
KRKAGDDAVGAGAPYRQRP
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