prot_L-elsbetiae_contig759.16500.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig759.16500.1
Unique Nameprot_L-elsbetiae_contig759.16500.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length1383
Homology
BLAST of mRNA_L-elsbetiae_contig759.16500.1 vs. uniprot
Match: A0A6H5JG23_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JG23_9PHAE)

HSP 1 Score: 345 bits (885), Expect = 1.870e-94
Identity = 520/1561 (33.31%), Postives = 647/1561 (41.45%), Query Frame = 0
Query:   28 TPPSNTAGRG--KFPPEKRLGSGIVPDGRQDSSKAAK-RFFVRPKVGSERDDTTNKFL-----------------SETSETAKNILSGTTEVVVATLVNTGPANTFLTPLHNWSRSRKRVAEAVEAAATAAPSEARSAXXXXXXXXXXQRALFEEQEEVRTNNPWLGLLRDTFPLPQPVKNTYSALVSVAAVPGQLLQTGKQTAEALTVAAETAGAMPD-------RVRETVARGQATARTAQEVLAEAPGRVQEVVTATREFPGKMGRVVEEGTEAVEAAVEAGRKAADAVETLPSRLPDLIETVGDDAL----SLAEGTAAGADAAGTALWGLTKEVAAWAADLVLRQALTPVHEYRTSTRRVQAALDEELAALPQASLPPRS--SAEKAPSNPTALVTAGTTPPVAGDSAALGEDTTPDIGDSM----------------------------PMSRLVGLRGRFLSWRRKRKSIPAVAVADEDDDEE---GDVVENVAVDSKEI-----SAVAAAVSKPAISQEARAETASAAAQAESTIAARRSEEAEVGAAAKTLIAENVLVTDGQVVTGEVLLPVAASVTVGG---------------ADEASSKENIYVAPVGALAISVASEDRG------AVESAAVPVAARPLGEAADFEDEGKETAADADKRPVARA-TPADLSDDLDLD-QRTAALAGDDESLAGKI--EIASERGESQTASASSFAGSSPFSGASSDTGERALADAEQAGGASVGGKGVDYTSSGEQ-----MGSPSSSTVAAIAPSKEVAASAATPRVDTGSDYKNALLGGPNVDTLTKNYRPSPVVNSVESTAAAAVNDAEETVTSTLPSAVGSTARKQETAEAAPLETGERPGPAVSSA--SPSSPVP-TGTALSPAGSPSRHRVSRKKEGRGSPAAQE----RFEAPTKAAERE-GPADDAGATVSSEKPPVVPSEAASDEVAETAAAGQAVPRGAGKAGIVGGGSGTLEVPSSPSSAVNPAAEFLRDWVVKAVPQKKAELKRKESAVCWERQWYPVATVLELLQ--------QHXXXXXXXXXRFQMLDRAYELAPIPREGRRRSP---DFRGWGCRAI-ADDEVSDPER-TRSSVGPAAAVAAARVPLRESNGLLWAWPDTSPEGLAAAELAGP----AALPDFLGIGGTLGRAPGVWRR-LLRRQIAPQRAPESTDEHGGGGHEAERKKRGNQR---------------HALFVEREISCGFSDAVRGLVTASHGQAVRALTAGGNGDVNAPKDDDLLVDASPAGGDESSSGVLRAAFDTSSARGEVLFSSPTVVEWRFSP---------------------AWAVQEESATTAATTGEG--------AVTATSSRQRSWLRRRLSGLGGGGRGSGGVVGRRSRVSRSAAGSDQRDTRALEGGVRQVAAAHYVASLLPVGPNRTKVFARLEVEPSG--LLGGRSLWWSRRIRRGLLVAALDEVASC---RSAA--------------------------------TGGGNGGRLLSSVAEAWLEGAAEGGPF 1382
            TP   TAGRG  K P ++R  +   PDG +D+ +A +   FVRPKV        N                    S+T  TA  I+S TTEVVVAT+ +TG AN  LTPLH WS SRKRVAEAVEA            XXXXXXXXXX              NPW+  LR    LPQPVK TYS   +VAAVPGQL ++G+Q A +L+ A E              R R    +   TARTA+E + E PGRV+E+V AT+                               ETLPSRLP LIET  DDAL     LAEGTA G DAAGTALW +TKE+  WAAD VLR  LTPVHEY  S RRVQ ALD+E      A+   RS  SAE+A              P A  ++ L                                        P+SRL GLR RF SWR +++SI AVAVA               N    ++E+       V+  V  P    E+R  TA  A      IAA RS+ A                                                     A    SKE   ++  GA A + A  D        A +   V +  RP+      E E +E    AD+    R  + A  S  L L    +A LA    ++A  +  +  S+ G    ASA    G S   G  + +G +A                      GEQ      G+ + S ++ I+ S  V A      V TG+      L        T +   SP  +     AAA    AEE VT+T    V +         A P   G  P   V S    P S +P T   L+ +G+          EGRGS  A++    R +A T    RE  P+ +  A+     P  VP    S+     AAA +A                        +  V PA EFL+DWV  AVP+KK ELKR+E AVCWERQWYPVA V +L Q        +          RF+ML R YEL  +P EG    P   + R W CR++ A     D E+ +RSS       AA  VP+RES+GLLWAWPD SPEGL AA LA P    A L D    GG    +P  WRR LLRR  A         E G G   A  +KRG                    + VE ++ CG+S+AV GL+  +HG+AV    AGG                   G +E++            A GEV+F+ PTVV WRF P                     A A +++ ++     GE         AV+ TS   R WLRRRLSG                       G+++R      GG     +  YVA LLPVGP  TKVFARLEVEPSG  LL G SL  SRR+RRG L  A+D+ A+    RSAA                                +GG  G RL S   E W+ GA  GGPF
Sbjct:   45 TPLKATAGRGGSKVPRKERTSA---PDGSKDTREAWRWGGFVRPKVYPASKQNKNXXXXXXXXXXXXXXDIGTAGSDTG-TAMAIVSQTTEVVVATIASTGAANALLTPLHRWSSSRKRVAEAVEAXXXX--------XXXXXXXXXXXXXXXXXXXXXXXTNPWVAHLRVV--LPQPVKKTYS---TVAAVPGQLAKSGEQAAASLSAAKENLAXXXXXXXXXXXRARGATMQALETARTAREAITEVPGRVEELVKATQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXETLPSRLPSLIETTTDDALVLAGDLAEGTALGLDAAGTALWEVTKELGGWAADFVLRPVLTPVHEYHMSARRVQDALDDERVVALNAAGKSRSLSSAEEA----------NVGVPEAATNSILXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDRRTPVSRLAGLRRRFSSWRCRKRSIVAVAVAXXXXXXXXVGSSQSSNATTGTREVVHDPTPTVSETVVVPV---ESRGRTAPVAGL---EIAAGRSDAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAVVPSKEAAPLSEPGATASAPALGDEKLTRPLLAEDDGLVSLEPRPVAAVGPLEQEEEEQEGGADRGGACRGNSTAIASGTLGLKPDGSATLAAAATTVAAVLAEDGLSQAGNVAGASAGRARGGSKQEGDDNGSGHKA----------------------GEQDPPAIEGTATPSGLSRISASTAVVAPXXXXXVGTGAAXXXTKLAA------TSSTAASPAADLAGDAAAAEALAAEE-VTATFEVDVDAAP------SAPPTTAGPTPLSRVRSTHGEPGSDLPNTAPPLAVSGA-----AQEDGEGRGSSVAKQNDKPRADAATDGKSREKAPSAEPTASALKTSPEQVPP---SEGDTNPAAAAEAXXXXXXXXXXX-XXXXXXXXXXXXAWGVQPAVEFLKDWVEAAVPRKKEELKRREDAVCWERQWYPVAVVSDLRQLLLRRLRRRRWRGGDGRSVRFEMLGREYEL--LPPEGGADKPTSLETRAWRCRSVVALGGGPDEEKPSRSST----VAAAEEVPVRESSGLLWAWPDISPEGLEAAALASPSCSAAGLDDDYCGGGDETASP--WRRVLLRRHTAV--------EGGYGDGPAREEKRGGSXXXXXXXXXXXXXXXXEVVVVEHDVPCGYSEAVGGLLDPAHGEAVMGAAAGGG-----------------EGREEAA------------AWGEVVFAPPTVVGWRFEPTPXXXXXXXEAAGRSEETSIPASADRDQPSSPPVPDGESPVVMKEKEAVSNTSPGLR-WLRRRLSG---------------------GLGAEERRPGVGVGG----GSVRYVAVLLPVGPEHTKVFARLEVEPSGRRLLDGLSLG-SRRLRRGTLAKAIDDAAAAAVRRSAAGEQAQADAGRGAKISTTHGGGESGESVSGRSSSGGKGGARLTSPAVEEWVRGAGNGGPF 1456          
BLAST of mRNA_L-elsbetiae_contig759.16500.1 vs. uniprot
Match: D7FH24_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FH24_ECTSI)

HSP 1 Score: 305 bits (781), Expect = 2.020e-81
Identity = 475/1461 (32.51%), Postives = 585/1461 (40.04%), Query Frame = 0
Query:   92 ILSGTTEVVVATLVNTGPANTFLTPLHNWSRSRKRVAEAVEAAATAAPSEARSAXXXXXXXXXXQRALFEEQEEVRTNNPWLGLLRDTFPLPQPVKNTYSALVSVAAVPGQLLQTGKQTAEALTVA-------AETAGAMPDRVRETVARGQATARTAQEVLAEAPGRVQEVVTATREFPGKMGRVVEEGTEAVEAAVEAGRKAADAVETLPSRLPDLIETVGDDAL----SLAEGTAAGADAAGTALWGLTKEVAAWAADLVLRQALTPVHEYRTSTRRVQAALDEELAALPQASLPPRS--SAEKAP-SNPTALVTAGTTPPVAGDSAALGEDTTPDIGDSM------------------PMSRLVGLRGRFLSWRRKRKSIPAVAVADEDDDEEGDVVENVAVDSKEISAVAAAV--SKPAISQEARAETAS---AAAQAESTIAARRSEEAEVGAAAKTLIAENVLVTDGQVVTGEVLLPVAASVTVGGADEASSKENIYVAPVGALAISVASEDRGAVESAAVPVAARPLGEAADFEDEGKETAADADKRPVARATPADLSDDLDLDQRTAALAGDDESLAGKIEIASER----GESQTASASSFAGSSPFSGASSDTGERALADAEQAG---GASVG-GKGV-----DYTSSGEQMGSPSSSTVAAIA-PSKEVAASAATPRVDTGSDYKNALLGGPNVDTLTKNYRPSPVVNSVESTAAAAVNDAE----------ETVTSTLPSAV-GSTARKQETAEAAPLETGERPGPAVSSASPSSPVPTGTALSPAGSPSRHRVSRKKEGRGSPAAQE----RFEAPTKAAERE-----GPADDAGATVSSEKPPVVPSEAASDEVAETAAAGQAVPRGAGKAGIVGGGSGTLEVPSSPSSAVNPAAEFLRDWVVKAVPQKKAELKRKESAVCWERQWYPVATVLELLQ-----QHXXXXXXXXXRFQMLDRAYELAPIPREGRRRSP---DFRGWGCRAI-ADDEVSDPER-TRSSVGPAAAVAAARVPLRESNGLLWAWPDTSPEGLAAAELAGPAALPDFLGIGGTLGRAPGVWRRLLRRQIAPQRAPESTDEHGGGGHEAERKKRGNQR-------HALFVEREISCGFSDAVRGLVTASHGQAVRALTAGGNGDVNAPKDDDLLVDASPAGGDESS---SGVLRAAFDTSSARGEVLFSSPTVVEWRF------------------------SPAWAVQEESATTAATTGEG--------AVTATSSRQRSWLRRRLSG----------LGGGGRGSGGVVGRRSRVSRSAAGSDQRDTRALEGGVRQVAAAHYVASLLPVGPNRTKVFARLEVEPSG--LLGGRSLWWSRRIRRGLLVAALDEVASC---RSAA--------------------------------TGGGNGGRLLSSVAEAWLEGAAEGGPF 1382
            I+S TTEVVVAT+ +TG AN  LTPLH WS SRKRVAEAVEA            XXXXXXXXXX              NPW+ LLR    LPQPVK TY    +VAAVPGQL ++G+Q A +L+ A       AE     P R R    +   T R             +E+V                                 A ETLPSRLP LIET  DDAL     LAEGTA G DAAGTALW +TKE+  WAAD VLR  LTPVHEYRTSTRRVQ ALDEE      A+   RS  SAE+A    P                         ++G +                   P+SRL GLRGRF SWRR+++SI AVAVA    DE+GD     +  S   +    AV    P +S+   A   S   AA  A   IAA RS+ A           E  + T    V      P    V VGG  + + +E+   + VG    +VA     A +S     A+ P       EDE            + R   A+    + L+ R  A  G  E +  + E  ++R    G   TA AS   G  P   A++     A     +AG   GAS G  +G      D   SG + G      +   A PS     SA+T  V                               + S AAA    AE          +   S+ P+A  G T   +  A + P E+G        S  P++  P   A+S AG   R       EGRGS  A+     R +A T    RE     GP   A  T   ++PP       S      AAA                           +  V PA EFL+ WV  AVP+KK ELKR+E AVCWERQWYPVA   +L +     +          RF+ML R YEL  +P +G    P   + R W CR+I A D+  D E+ +RSS       AA  VP+RES+GLLWAWPDTSP+GL AA LA PA+                                                               + VE ++ CG+S+AV GL+  +HG+AV A                                 +GV RAA  +   +GEV+F+ PT V WRF                        +PA A +++        GE         A      R R WLRRRLSG          +GGGGRGS                                    YV  LLPVGP RTKVFARLEV P G  LL G SL  SRR RRG L  A+D+ A+    RSAA                                +GG  G RL S   E W+ GA  GGPF
Sbjct:    3 IVSQTTEVVVATIASTGAANALLTPLHRWSSSRKRVAEAVEAXXX-------XXXXXXXXXXXXXXXXXXXXXXXXXXNPWVALLRAA--LPQPVKKTYR---TVAAVPGQLAKSGEQAAASLSAAKDNLAAAAEVXXXAPGRARGAATQALETTRXXXXXXXXXXXXXEELVKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAETLPSRLPGLIETTTDDALVLAGDLAEGTALGLDAAGTALWEVTKELGGWAADSVLRPVLTPVHEYRTSTRRVQDALDEERVVALNAAGKKRSLSSAEEANVGGPEXXXXXXXXXXXXXXXXXXXXXXLGEVGSAAXXXXXXXXXXXXXSDRRTPVSRLAGLRGRFSSWRRRKRSIVAVAVAF---DEDGDNTAGSSQGSNATTGTREAVLDPTPTVSETVLARVESRGRAAPVAGLEIAAGRSDAAXXXXXXXXXX-EEAMATSTAPVRTVTDPPDTGGVGVGGRQQPTLEESSTQSSVGGATAAVAPSKEAAPQSEPGAPASAPA-----LEDE-----------KLTRPPLAEDGGPVSLEPRPVADTGPLEQVEEEPEGGADRRAAGGGISTAIASGTLGLKPEGSATAAAAVLADDGLMRAGVVAGASAGRARGDPKQMGDDNGSGHKAGEQDPPAIEGTATPSGLSRTSASTAVVAPXXXXXXXXXXXXXXKLAXXXXXXXXPAAGLTSDAAAEALAAEXXXXXXXXDLDAAPSSAPTATAGPTPLPR--ARSTPRESG--------SDLPNTAPPQ--AVSGAGQEDR-------EGRGSGVAKRNDKPRADAATGDESRENAPSVGPTASALKTSPEQQPP-------SKADTNPAAAXXXXXXXXXAGEXXXXXXXXXXXXXXXAWGVQPAVEFLKGWVEAAVPRKKEELKRREDAVCWERQWYPVAFASDLRRLRRRRRRWRGGDGRSVRFEMLGREYEL--LPPDGVADKPTSLETRAWRCRSIVAPDDGPDEEKPSRSST----VAAAEEVPVRESSGLLWAWPDTSPKGLEAAALASPASSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLEVVVVEHDVPCGYSEAVGGLLDPAHGEAVMAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGVFRAASGSPRGQGEVVFAPPTFVGWRFEPTPXXXXXXXXXXXXXXXXXXASTPASADRDQXXXXXVPDGESPEVIKEKEAAWNAPPRGR-WLRRRLSGGLGAEERRPGVGGGGRGS----------------------------------VRYVVVLLPVGPERTKVFARLEVAPPGRRLLDGLSLG-SRRGRRGTLAKAIDDAAAAAVRRSAAGDQAQADAGRGAKSSTTHGGGESGESVSGRSSSGGKGGARLTSPAVEEWVRGAGNGGPF 1363          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig759.16500.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JG23_9PHAE1.870e-9433.31Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FH24_ECTSI2.020e-8132.51Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 145..165
NoneNo IPR availableCOILSCoilCoilcoord: 963..990
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..2
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 3..10
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 16..1382
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 11..15
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..15
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..15
score: 0.798

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig759contigL-elsbetiae_contig759:21085..27423 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig759.16500.1mRNA_L-elsbetiae_contig759.16500.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig759 20992..29446 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig759.16500.1 ID=prot_L-elsbetiae_contig759.16500.1|Name=mRNA_L-elsbetiae_contig759.16500.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=1383bp
MWLLVPLLILPTCTGLKFHLPLLQRRDTPPSNTAGRGKFPPEKRLGSGIV
PDGRQDSSKAAKRFFVRPKVGSERDDTTNKFLSETSETAKNILSGTTEVV
VATLVNTGPANTFLTPLHNWSRSRKRVAEAVEAAATAAPSEARSATAAER
ERRRQQRALFEEQEEVRTNNPWLGLLRDTFPLPQPVKNTYSALVSVAAVP
GQLLQTGKQTAEALTVAAETAGAMPDRVRETVARGQATARTAQEVLAEAP
GRVQEVVTATREFPGKMGRVVEEGTEAVEAAVEAGRKAADAVETLPSRLP
DLIETVGDDALSLAEGTAAGADAAGTALWGLTKEVAAWAADLVLRQALTP
VHEYRTSTRRVQAALDEELAALPQASLPPRSSAEKAPSNPTALVTAGTTP
PVAGDSAALGEDTTPDIGDSMPMSRLVGLRGRFLSWRRKRKSIPAVAVAD
EDDDEEGDVVENVAVDSKEISAVAAAVSKPAISQEARAETASAAAQAEST
IAARRSEEAEVGAAAKTLIAENVLVTDGQVVTGEVLLPVAASVTVGGADE
ASSKENIYVAPVGALAISVASEDRGAVESAAVPVAARPLGEAADFEDEGK
ETAADADKRPVARATPADLSDDLDLDQRTAALAGDDESLAGKIEIASERG
ESQTASASSFAGSSPFSGASSDTGERALADAEQAGGASVGGKGVDYTSSG
EQMGSPSSSTVAAIAPSKEVAASAATPRVDTGSDYKNALLGGPNVDTLTK
NYRPSPVVNSVESTAAAAVNDAEETVTSTLPSAVGSTARKQETAEAAPLE
TGERPGPAVSSASPSSPVPTGTALSPAGSPSRHRVSRKKEGRGSPAAQER
FEAPTKAAEREGPADDAGATVSSEKPPVVPSEAASDEVAETAAAGQAVPR
GAGKAGIVGGGSGTLEVPSSPSSAVNPAAEFLRDWVVKAVPQKKAELKRK
ESAVCWERQWYPVATVLELLQQHEQQQQQQQRRFQMLDRAYELAPIPREG
RRRSPDFRGWGCRAIADDEVSDPERTRSSVGPAAAVAAARVPLRESNGLL
WAWPDTSPEGLAAAELAGPAALPDFLGIGGTLGRAPGVWRRLLRRQIAPQ
RAPESTDEHGGGGHEAERKKRGNQRHALFVEREISCGFSDAVRGLVTASH
GQAVRALTAGGNGDVNAPKDDDLLVDASPAGGDESSSGVLRAAFDTSSAR
GEVLFSSPTVVEWRFSPAWAVQEESATTAATTGEGAVTATSSRQRSWLRR
RLSGLGGGGRGSGGVVGRRSRVSRSAAGSDQRDTRALEGGVRQVAAAHYV
ASLLPVGPNRTKVFARLEVEPSGLLGGRSLWWSRRIRRGLLVAALDEVAS
CRSAATGGGNGGRLLSSVAEAWLEGAAEGGPF*
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