prot_L-elsbetiae_contig7574.16474.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig7574.16474.1
Unique Nameprot_L-elsbetiae_contig7574.16474.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length244
Homology
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BLAST of mRNA_L-elsbetiae_contig7574.16474.1 vs. uniprot
Match: D7FNR2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNR2_ECTSI)

HSP 1 Score: 437 bits (1124), Expect = 1.860e-153
Identity = 208/242 (85.95%), Postives = 227/242 (93.80%), Query Frame = 0 
Query:    3 APLPGLWKRQQPNTLGSWRVESVVDSGEPNSMFVFLFDDGSVHTAVSGAGGQDDQAGRWRVRGNEFSLTVDRRSKSRMLEDLRYVGVLKKFSSVVEGSVIEGQMDPAVVGKFKMTPLESSMAADLKKAAEINDDAKYIVPKYSKSAMAGDWVLMWQDTGAVFRLHLGEDLQFESVEGVGSGQLGGRWNLWGPDRMLMTVVRSKSHGVQMHGDHMFWGTKLEGPPDSKIPLKISGYVMYGFLE 244
            AP PGL+ R  PN LGSWRVESV+D+ +PNSMFVFLFDDGSVHTAVSG  G+DD AGRWRVRGNEFSLTV+R+S+SR L+DL+YVGVLKKFSSVVEGSVIEGQMDPAVVGKFKMTP+ESSMA+DLKKAAE ND AKY+ PKYSK+A+AGDWVLMWQDTGAVFRLHLGEDLQFES++G+GSGQLGGRWNLWG +RM MTVVRSKSHGVQMHGDHMFWGTKLEGPPDSKIPLKISGYVMYGFLE
Sbjct:   28 APAPGLFGRSTPNGLGSWRVESVLDTQKPNSMFVFLFDDGSVHTAVSGTDGKDDHAGRWRVRGNEFSLTVNRKSQSRFLDDLKYVGVLKKFSSVVEGSVIEGQMDPAVVGKFKMTPVESSMASDLKKAAEANDSAKYVAPKYSKAAIAGDWVLMWQDTGAVFRLHLGEDLQFESLKGLGSGQLGGRWNLWGTERMFMTVVRSKSHGVQMHGDHMFWGTKLEGPPDSKIPLKISGYVMYGFLE 269
[Close]
BLAST of mRNA_L-elsbetiae_contig7574.16474.1 vs. uniprot
Match: A0A6H5LDX9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LDX9_9PHAE)

HSP 1 Score: 209 bits (533), Expect = 3.820e-63
Identity = 99/113 (87.61%), Postives = 109/113 (96.46%), Query Frame = 0 
Query:   85 RYVGVLKKFSSVVEGSVIEGQMDPAVVGKFKMTPLESSMAADLKKAAEINDDAKYIVPKYSKSAMAGDWVLMWQDTGAVFRLHLGEDLQFESVEGVGSGQLGGRWNLWGPDRM 197
            RYVGVLKKFSSVVEGSVIEGQMDPAVVGKFKMTP+ESSMA+DLKKAAE ND AKY+ PKYSK+A+AGDWVLMWQDTGAVFRLHLGEDLQFES++G+GSGQLGGRWNLWG +R+
Sbjct:  229 RYVGVLKKFSSVVEGSVIEGQMDPAVVGKFKMTPVESSMASDLKKAAEANDSAKYVAPKYSKAAIAGDWVLMWQDTGAVFRLHLGEDLQFESLKGLGSGQLGGRWNLWGTERL 341
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig7574.16474.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FNR2_ECTSI1.860e-15385.95Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5LDX9_9PHAE3.820e-6387.61Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig7574contigL-elsbetiae_contig7574:4998..9105 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig7574.16474.1mRNA_L-elsbetiae_contig7574.16474.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig7574 4998..9105 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig7574.16474.1 ID=prot_L-elsbetiae_contig7574.16474.1|Name=mRNA_L-elsbetiae_contig7574.16474.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=244bp
MKAPLPGLWKRQQPNTLGSWRVESVVDSGEPNSMFVFLFDDGSVHTAVSG
AGGQDDQAGRWRVRGNEFSLTVDRRSKSRMLEDLRYVGVLKKFSSVVEGS
VIEGQMDPAVVGKFKMTPLESSMAADLKKAAEINDDAKYIVPKYSKSAMA
GDWVLMWQDTGAVFRLHLGEDLQFESVEGVGSGQLGGRWNLWGPDRMLMT
VVRSKSHGVQMHGDHMFWGTKLEGPPDSKIPLKISGYVMYGFLE
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