prot_L-elsbetiae_contig7571.16472.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig7571.16472.1
Unique Nameprot_L-elsbetiae_contig7571.16472.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length264
Homology
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BLAST of mRNA_L-elsbetiae_contig7571.16472.1 vs. uniprot
Match: D8LRQ1_ECTSI (Uncharacterized protein (Fragment) n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LRQ1_ECTSI)

HSP 1 Score: 131 bits (329), Expect = 7.130e-31
Identity = 98/204 (48.04%), Postives = 128/204 (62.75%), Query Frame = 0 
Query:   73 RACTLLACGWSFQSWGCTDGFTGSSWRTS-----SKATSATXXXXXXXXXXXXSVWQQRRAPPYAAVAASRSR-RRITGATLACSQTGAASTLEVQENGGEGTK-LGGTAWVE------DDLEAAAAAQAEAAADEEAPDVNSKRGKQRKPNNANIGRNKLFDLLNDLEGGGG--CDSIDLLDIGGVAAEGSSSSSSVVVDGEA 261
            RACTLLACG S QSW CTDGF G++WR+S     ++ T+              + WQQRR  P A V ASRS  RR++GAT+ACS+T +ASTL+VQENGG  T+ LG   W +      D++EAA A  A   +  +  D + +R  +RKP  AN GRNKLFDLLNDLEGGGG   ++I+LL +   A     SSSS++++G A
Sbjct:    3 RACTLLACGVSLQSWVCTDGFAGNAWRSSPSGNKAEKTATHTCVAAPPAEAATAGWQQRR--PAARVLASRSSCRRVSGATIACSRTESASTLQVQENGGGDTQQLGDAPWEDGEGAAADEIEAAGAGGASTPSGTDEEDRSKRR--KRKPVTANGGRNKLFDLLNDLEGGGGGGLEAIELLGVEKTAHGVGGSSSSMLLEGAA 202
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig7571.16472.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LRQ1_ECTSI7.130e-3148.04Uncharacterized protein (Fragment) n=2 Tax=Ectocar... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig7571contigL-elsbetiae_contig7571:1586..2377 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig7571.16472.1mRNA_L-elsbetiae_contig7571.16472.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig7571 1586..2377 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig7571.16472.1 ID=prot_L-elsbetiae_contig7571.16472.1|Name=mRNA_L-elsbetiae_contig7571.16472.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=264bp
SRSSQTQDQRQGERDTFEERGEQRMGLAGHGGQMVRRLPSDGRQRRERHH
HRIEQHHVASLAHRRRRPDRIRRACTLLACGWSFQSWGCTDGFTGSSWRT
SSKATSATTRTQPPSSCATTSVWQQRRAPPYAAVAASRSRRRITGATLAC
SQTGAASTLEVQENGGEGTKLGGTAWVEDDLEAAAAAQAEAAADEEAPDV
NSKRGKQRKPNNANIGRNKLFDLLNDLEGGGGCDSIDLLDIGGVAAEGSS
SSSSVVVDGEAMVD
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