prot_L-elsbetiae_contig7557.16453.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig7557.16453.1
Unique Nameprot_L-elsbetiae_contig7557.16453.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length45
Homology
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BLAST of mRNA_L-elsbetiae_contig7557.16453.1 vs. uniprot
Match: D7FNA1_ECTSI (PPR_long domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNA1_ECTSI)

HSP 1 Score: 87.4 bits (215), Expect = 5.660e-19
Identity = 38/44 (86.36%), Postives = 40/44 (90.91%), Query Frame = 0 
Query:    1 QVQRLSWFANWFDSLEDPPTAIIDGPNAGYMGQNFPEGGFSLTQ 44
            +VQRLSWFANWF SLEDPPTAIIDGPN G+M QNF EGGFSLTQ
Sbjct:  513 EVQRLSWFANWFCSLEDPPTAIIDGPNVGFMNQNFKEGGFSLTQ 556
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BLAST of mRNA_L-elsbetiae_contig7557.16453.1 vs. uniprot
Match: A0A6H5JYJ8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYJ8_9PHAE)

HSP 1 Score: 81.6 bits (200), Expect = 1.520e-17
Identity = 36/44 (81.82%), Postives = 37/44 (84.09%), Query Frame = 0 
Query:    2 VQRLSWFANWFDSLEDPPTAIIDGPNAGYMGQNFPEGGFSLTQA 45
            VQRLSWFANWF SLEDPPTAIIDGPN G+M QNF  GG S TQA
Sbjct:  174 VQRLSWFANWFCSLEDPPTAIIDGPNVGFMNQNFKGGGLSFTQA 217
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig7557.16453.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FNA1_ECTSI5.660e-1986.36PPR_long domain-containing protein n=1 Tax=Ectocar... [more]
A0A6H5JYJ8_9PHAE1.520e-1781.82Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.50.11980coord: 1..45
e-value: 5.6E-8
score: 34.4

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig7557contigL-elsbetiae_contig7557:403..537 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig7557.16453.1mRNA_L-elsbetiae_contig7557.16453.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig7557 403..538 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig7557.16453.1 ID=prot_L-elsbetiae_contig7557.16453.1|Name=mRNA_L-elsbetiae_contig7557.16453.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=45bp
QVQRLSWFANWFDSLEDPPTAIIDGPNAGYMGQNFPEGGFSLTQA
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