prot_L-elsbetiae_contig755.16450.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig755.16450.1
Unique Nameprot_L-elsbetiae_contig755.16450.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length1021
Homology
BLAST of mRNA_L-elsbetiae_contig755.16450.1 vs. uniprot
Match: A0A6H5KDH3_9PHAE (Smr domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDH3_9PHAE)

HSP 1 Score: 504 bits (1298), Expect = 1.720e-158
Identity = 428/1048 (40.84%), Postives = 504/1048 (48.09%), Query Frame = 0
Query:    1 ILFRCNFDQSQRVTWIDLAVSLSLHKDACIAVWLDVDVGVCQGRVRSRVGHRTLGPGPASAGVVKRIAGDLRPPHRKEGFHAVLRCKGGDQQGLSDAVALLSDIRGGXXXXXXXXXXXXXXXXXXXXXXXXXXXSETARASSAPATQR--DHAGGAFCXXXXXXRWGGAERAGVAPWDQP-ASFGGGWGLPA---------------HGAWESSFTADGGSFAAKAGVGEPGAAAGRGFPAXXXANYGSAGGAVVGVSTPQREDRNGPSLAWGGAAGRRQVGAVEGFGGGPAMRTRGAADGAHNXXXXXXXXXXXXXXXXXXXXXXXXPPALRFTGRVGKELPKPXXXXXXXXXXRSSSLSSIARLTPQKPAGDASSXXXXXXLRQPAGPXXXXXXRLLTPAEISATFSDLQAAPRVIAPADVAVAAPP-TRKLGGAPGRRHGAGNKPGQDRGAPRGESLPLGPSSLEEWSSRAALSAR---DDGGGDFSSLRSWEPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXAS---LSDGETFFVLEDMFGGLLLPETLEKVFRESDNDLEKAVHEGFRLLEAT--AAEMFDAPNSSTASTATTTDLSSSETIXXXXXXXXXXXXXXXXXXXXXXXDESDGEFAEVSEWSHNQVETLTDLCLAFEGTFTREDIIAALTASDHDPTCAAQLLLDTGPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSXXGVKEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAEAYTRGGRNGGAAAADPSRIGQRWKKEMEAGNLRAAREAFRERNPFVRVGHTDDGVSVLKVLALPRSSQCSTPGQLSIDLHLLRRAEALLVLEAVLGALARGSNALFSRLPCRRQNHHPEDAVSDGRRGYVDEAEQVSPETVTSD-GAEAPDGSGAR---GACCRDSEPRRRRDLYAERFTSLEVVVGRGAHSVAGVPRLRPCVAGYLASKRLQAEAVEGDRGKGVVVVRL 1017
            ++ RCNFDQSQRVTW+DLAVS SLHKDACIAVWLD+ + VCQGRV+SRVGH TLG G ASAG+VKR A D RPPHRKEGFH VLRC G   Q LS+A+ALLS   G                              T RA + PAT    D  GG         R  G +  G+  WDQ  A  G  W + +               H A +  F  + G+  A      PGAA G+G        Y +   A   ++ P+ +   GP LA GG   ++QVG   G   GP  RTR A    +N                            RF G + K+LP             SSSL+SIA+LT Q  A   +S      ++Q   P      RLLTPAEI + FSDLQA PRV+AP DV VAA   T +LG  P     A  K  +D    +   LPLGP+S+EEW SR+    +   ++G    SS RS E A                             +   +SDGE FFVLEDMFGGLL PETLE +F ES N LEKAV EGF++ E      E+   P+S ++   TT D  +  T                        DE+ G+FA+V  W+  QV+TLT+LCLAFE T +RE IIAALTASDHD T AAQLLLD  P                                                                 XXXXXX XX   E                                               AEA+ RGGRNGGAAAADPSRIGQRWKK ME  NLRAAREAFRERNP +RVGHT DGVSVLKVL LP  SQCSTPGQLS+DLHLLRRAEAL VLE VL A+             RR   H    V+  R     +  +  P+ V +  G   P  SGA        +    +  R +  ++F SLEVVVGRGAHSVAGVPRLRPCV GYLA K  +AE VEGDRGKGVVVV L
Sbjct:   89 LIDRCNFDQSQRVTWLDLAVSHSLHKDACIAVWLDIPIDVCQGRVQSRVGHPTLGAGLASAGIVKRYAKDFRPPHRKEGFHTVLRCHG--DQDLSEAIALLSLSAGSDGAPG------------------------TERAPAPPATTAGSDRVGGDLGGGTGWRR--GVDSVGMC-WDQSLAEEGSQWNMNSCPPGEVGAVATAPTVHHAVDIFFPVEKGATTAGMATKLPGAAPGQG-----GVTYHTPASADAPMTRPEYD--RGPVLACGG---QQQVGG--GGAAGPVARTRDAV--GNNGRTAANDATSDPSLPSAMNGDKRG----RFVGSLEKQLPH----RPKQRGFTSSSLNSIAKLTSQSQAEALAS------VKQSLKPKT----RLLTPAEICSNFSDLQAPPRVLAPEDVGVAASARTDRLGTGP--TAAATGKRDEDHSCAQPVVLPLGPNSIEEWPSRSTFPIQGNEENGNTGNSSYRSEEAATAEGGQAHDHRERVPAGAWDGDDQTNEEEADLDVSDGEAFFVLEDMFGGLLPPETLENLFAESGNYLEKAVKEGFKVCEGLWGQGEVITFPDSPSSDGTTTDDFLTPST-------SAGTDVSTNENGSDTRDDETHGKFADVLHWTPKQVDTLTELCLAFEATISRETIIAALTASDHDATSAAQLLLDPRPANPRERGEGRRSRPHRGVAQRERKARPPRSDDSLPTATSLGATCGVDHRAGALSERQWEEEDAEGXXXXXXXXXXGDEGLTSEEYRTRANAAAEQMKAWFQKA----------------------AEAFIRGGRNGGAAAADPSRIGQRWKKSMETANLRAAREAFRERNPLIRVGHTHDGVSVLKVLRLPEPSQCSTPGQLSVDLHLLRRAEALNVLETVLHAIR------------RRAGEHSRVLVNRPRAPKQSQQLKEHPDVVAAAAGQTEPSYSGASYTPPVAQQGEGLQHDRVIRVQKFASLEVVVGRGAHSVAGVPRLRPCVMGYLAGKGFRAEGVEGDRGKGVVVVGL 1032          
BLAST of mRNA_L-elsbetiae_contig755.16450.1 vs. uniprot
Match: D7FMH4_ECTSI (Smr domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMH4_ECTSI)

HSP 1 Score: 409 bits (1052), Expect = 1.220e-123
Identity = 388/1055 (36.78%), Postives = 460/1055 (43.60%), Query Frame = 0
Query:    1 ILFRCNFDQSQRVTWIDLAVSLSLHKDACIAVWLDVDVGVCQGRVRSRVGHRTLGPGPASAGVVKRIAGDLRPPHRKEGFHAVLRCKGGDQQGLSDAVALLSDIRGGXXXXXXXXXXXXXXXXXXXXXXXXXXXSETARASSAPATQRDHAGGAFCXXXXXXRWGGAERAGVAPWDQPASFGGGWGLPAHGAWESSFTADGGSFAAKAGVGEPGAAAGRGFPAXXXANYGSAGGAVVGVSTPQREDRNGPSLAWG--------------------GAAGRRQVGAVEGFGGGPAMRTRGAADG-----AHNXXXXXXXXXXXXXXXXXXXXXXXXPPALRFTGRVGKELPKPXXXXXXXXXXRSSSLSSIARLTPQKPAGDASSXXXXXXLRQPAGPXXXXXXRLLTPAEISATFSDLQAAPRVIAPADVAVAAPP-TRKLGGAPGRRHGAGNKPGQDRGAPRGESLPLGPSSLEEWSSRAALSAR---DDGGGDFSSLRSWEPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXA---SLSDGETFFVLEDMFGGLLLPETLEKVFRESDNDLEKAVHEGFRLLEAT--AAEMFDAPNSSTASTATTTDLSSSETIXXXXXXXXXXXXXXXXXXXXXXXDESDGEFAEVSEWSHNQVETLTDLCLAFEGTFTREDIIAALTASDHDPTCAAQLLLDTGPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSXXGVKEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAEAYTRGGRNGGAAAADPSRIGQRWKKEMEAGNLRAAREAFRERNPFVRVGHTDDGVSVLKVLALPRSSQCSTPGQLSIDLHLLRRAEALLVLEAVLGALARGSNALFSRLPCRRQNHHPEDAVSDGRRGYVDEAEQVSPETVTSDGAEA-PDGSGAR---GACCRDSEPRRRRDLYAERFTSLEVVVGRGAHSVAGVPRLRPCVAGYLASKRLQAEAVEGDRGKGVVVVRL 1017
            ++ RCNFDQSQRVTW+DLAVSLSLHKDACIAVWLD+ +G          G       PA+A    R+ GD                  G ++G+ D+V +  D                                      S P                    GG      AP               H A ++ F  +  + AA      PGAA     P      Y +   A   ++ P   D  GP LAWG                        ++QVG   G   GP  RTR A        AH+                            RF G + K+LP+           +SSSL+SIA+LTPQ  A   +S      ++QP  P      RLLTP EIS+ FSDLQA PRV+AP DV VAA     +L   P     A  K G+D    +   L LGP+S EEW+SR+ L  R   ++     SS RS E A                                 +SDGE FFVLEDMFGGLL PETLE +F ES   LEKAV EGF++ E      E    PNS ++  +TT D  +  T                        DE+ GEFA+VS W+H QV+TLT+LCLAFE T +RE IIAALTAS+HD T AAQLLLD GP                                                                          G +E     XXXXXXX                                   AEA+TRGGRNGGAAAADPSRIGQRWKK ME  NLRAAREAFRERNP +RVGHT DGV+VLKVL LP  SQCSTPGQLS+DLHLLRRAEAL VLE VL A+             RR   H    V+  R     +  +  P  V + G    P  SGA     A  +    +  R +   +F SLEVVVGRGAHSVAGVPRLRPCV GYLA K  +AEAVEGD+GKGVVVV L
Sbjct:   39 LIDRCNFDQSQRVTWLDLAVSLSLHKDACIAVWLDIPIGS-----DGAPGTERAPAPPATAAGSDRVGGDFGGGT-------------GWRRGV-DSVEMFRD-------------------------QSLAEEGSQWNIDSCPP-------------------GGVGAVATAP-------------AVHHAVDTFFPVEKSATAAGMAAKLPGAA-----PGQWGVTYHTPAAADAPMTRPA--DDFGPVLAWGEDQRAAEDTAIPXXXXXXXXXXXXQQQVGG--GGAAGPVARTRDAVGNNGWTAAHDATSYPSLPSAMNGNKSG-----------RFVGSLQKQLPR----RPKQRGFKSSSLNSIAKLTPQSQAEAPAS------VKQPVKPKT----RLLTPTEISSRFSDLQAPPRVLAPEDVGVAASAGINRLETGPAATAAA--KRGKDHSFAQPVVLALGPNSFEEWTSRSTLPIRGNEENRNTSNSSYRSEEAATAEGGQTFDHRERVKAGAGDDDDQTDGEEVDLDVSDGEAFFVLEDMFGGLLPPETLENLFAESGKYLEKAVKEGFKVCEGLWGQGEAITFPNSPSSDGSTTDDFLTPST-------SAGTDVSTNENGSESWDDETHGEFADVSHWTHKQVDTLTELCLAFEATISRETIIAALTASNHDATSAAQLLLDPGPANPRERGEGRRSRRYGGVAQRERKARPPRYDGCLPTATLLGATCGVDHRAGAL------------------GERGWEEEDAEGXXXXXXXGDEGLTSEEYRTRANAAAELMKAWFQKA-------AEAFTRGGRNGGAAAADPSRIGQRWKKSMETANLRAAREAFRERNPLIRVGHTRDGVAVLKVLRLPEPSQCSTPGQLSVDLHLLRRAEALNVLETVLHAIR------------RRAGEHTGVLVNGPRAPKPSQQHKEHPGVVAAPGGHTEPSSSGASYTPPAAQQGEGLQHDRVMSVLKFASLEVVVGRGAHSVAGVPRLRPCVMGYLAGKGFRAEAVEGDKGKGVVVVGL 937          
BLAST of mRNA_L-elsbetiae_contig755.16450.1 vs. uniprot
Match: A0A397T0S8_9GLOM (Uncharacterized protein (Fragment) n=1 Tax=Glomus cerebriforme TaxID=658196 RepID=A0A397T0S8_9GLOM)

HSP 1 Score: 60.5 bits (145), Expect = 2.200e-7
Identity = 32/87 (36.78%), Postives = 44/87 (50.57%), Query Frame = 0
Query:    1 ILFRCNFDQSQRVTWIDLAVSLSLHKDACIAVWLDVDVGVCQGRVRSRVGHRTLGPGPASAGVVKRIAGDLRPPHRKEGFHAVLRCK 87
            I+ RCNFD+ QR TWI+LA    L  DA I   LD    +C+ R+  R  H T   G     +++      +PP+  EGF  +L  K
Sbjct:    6 IVDRCNFDEEQRKTWINLAYQFKLSIDAII---LDTPYEICENRILKRKDHPTQVHGKDGLNILENFKQIFKPPNYNEGFERILNVK 89          
BLAST of mRNA_L-elsbetiae_contig755.16450.1 vs. uniprot
Match: I1BQ71_RHIO9 (Uncharacterized protein n=1 Tax=Rhizopus delemar (strain RA 99-880 / ATCC MYA-4621 / FGSC 9543 / NRRL 43880) TaxID=246409 RepID=I1BQ71_RHIO9)

HSP 1 Score: 56.2 bits (134), Expect = 9.760e-6
Identity = 30/86 (34.88%), Postives = 45/86 (52.33%), Query Frame = 0
Query:    1 ILFRCNFDQSQRVTWIDLAVSLSLHKDACIAVWLDVDVGVCQGRVRSRVGHRTLGPGPASAGVVKRIAGDLRPP--HRKEGFHAVL 84
            ++ RCNFDQ QR TWID+A   ++  D  +    + +   C  R++SRV H T   G +   ++KR   + RPP     EG   +L
Sbjct:   14 VIDRCNFDQQQRKTWIDIAYKYNVPIDCIVLTTAEQE---CAERIQSRVNHPTGVEGESGVNILKRFMKNYRPPTIDNPEGLERIL 96          
BLAST of mRNA_L-elsbetiae_contig755.16450.1 vs. uniprot
Match: A0A0B7NWY9_9FUNG (Uncharacterized protein n=1 Tax=Parasitella parasitica TaxID=35722 RepID=A0A0B7NWY9_9FUNG)

HSP 1 Score: 55.8 bits (133), Expect = 3.230e-5
Identity = 32/86 (37.21%), Postives = 42/86 (48.84%), Query Frame = 0
Query:    1 ILFRCNFDQSQRVTWIDLAVSLSLHKDACIAVWLDVDVGVCQGRVRSRVGHRTLGPGPASAGVVKRIAGDLRPP--HRKEGFHAVL 84
            I+ RCNFD+SQR TWID+A    +  D  +    + D   C  R+R R  H T   G    G++ R     RPP     EGF  +L
Sbjct:   22 IVDRCNFDRSQRQTWIDIAQHYKVPIDCIVLTASEAD---CGNRIRERQNHPTDVQGERGVGILSRFVKGYRPPLSDSNEGFSRIL 104          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig755.16450.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A6H5KDH3_9PHAE1.720e-15840.84Smr domain-containing protein n=1 Tax=Ectocarpus s... [more]
D7FMH4_ECTSI1.220e-12336.78Smr domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A397T0S8_9GLOM2.200e-736.78Uncharacterized protein (Fragment) n=1 Tax=Glomus ... [more]
I1BQ71_RHIO99.760e-634.88Uncharacterized protein n=1 Tax=Rhizopus delemar (... [more]
A0A0B7NWY9_9FUNG3.230e-537.21Uncharacterized protein n=1 Tax=Parasitella parasi... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013899Domain of unknown function DUF1771SMARTSM01162DUF1771_2coord: 767..835
e-value: 6.7E-8
score: 42.3
IPR013899Domain of unknown function DUF1771PFAMPF08590DUF1771coord: 769..834
e-value: 3.2E-11
score: 43.4
IPR002625Smr domainPFAMPF01713Smrcoord: 868..1017
e-value: 3.5E-17
score: 62.5
NoneNo IPR availableGENE3D3.30.1370.110coord: 951..1017
e-value: 1.1E-6
score: 30.6
NoneNo IPR availableGENE3D3.40.50.300coord: 1..92
e-value: 2.1E-7
score: 32.7
NoneNo IPR availablePANTHERPTHR46535FAMILY NOT NAMEDcoord: 758..886
coord: 967..1000
IPR036063Smr domain superfamilySUPERFAMILY160443SMR domain-likecoord: 964..1016

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig755contigL-elsbetiae_contig755:19948..32405 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig755.16450.1mRNA_L-elsbetiae_contig755.16450.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig755 19948..32405 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig755.16450.1 ID=prot_L-elsbetiae_contig755.16450.1|Name=mRNA_L-elsbetiae_contig755.16450.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=1021bp
ILFRCNFDQSQRVTWIDLAVSLSLHKDACIAVWLDVDVGVCQGRVRSRVG
HRTLGPGPASAGVVKRIAGDLRPPHRKEGFHAVLRCKGGDQQGLSDAVAL
LSDIRGGGGGGGGGGGGGPHGHDHGDASAPQPPPSETARASSAPATQRDH
AGGAFCGGGGGGRWGGAERAGVAPWDQPASFGGGWGLPAHGAWESSFTAD
GGSFAAKAGVGEPGAAAGRGFPAGAAANYGSAGGAVVGVSTPQREDRNGP
SLAWGGAAGRRQVGAVEGFGGGPAMRTRGAADGAHNNNNNNAGFYPPLLP
GGSRAAAGGNPPALRFTGRVGKELPKPPPPPGGGGGYRSSSLSSIARLTP
QKPAGDASSSAAAAALRQPAGPGPGPGPRLLTPAEISATFSDLQAAPRVI
APADVAVAAPPTRKLGGAPGRRHGAGNKPGQDRGAPRGESLPLGPSSLEE
WSSRAALSARDDGGGDFSSLRSWEPAASSSSAAAAAEPAGGGDGGDAARG
GGGGASLSDGETFFVLEDMFGGLLLPETLEKVFRESDNDLEKAVHEGFRL
LEATAAEMFDAPNSSTASTATTTDLSSSETISETISEKTISETISETISE
TNDEDESDGEFAEVSEWSHNQVETLTDLCLAFEGTFTREDIIAALTASDH
DPTCAAQLLLDTGPPPDQHQAAAAERRGRKTTSKRHQQRFGGAAQRERKT
RGGPRNSSVPAAAAAAATSLLGATCGGDKRDGGGGSGGGVKEGGWESADG
DSAGGWEEEEEGDEGLGSEEYRARANEAAEQMKAWFQKAAEAYTRGGRNG
GAAAADPSRIGQRWKKEMEAGNLRAAREAFRERNPFVRVGHTDDGVSVLK
VLALPRSSQCSTPGQLSIDLHLLRRAEALLVLEAVLGALARGSNALFSRL
PCRRQNHHPEDAVSDGRRGYVDEAEQVSPETVTSDGAEAPDGSGARGACC
RDSEPRRRRDLYAERFTSLEVVVGRGAHSVAGVPRLRPCVAGYLASKRLQ
AEAVEGDRGKGVVVVRLGNL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013899DUF1771
IPR002625Smr_dom
IPR036063Smr_dom_sf