prot_L-elsbetiae_contig7547.16446.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_L-elsbetiae_contig7547.16446.1
Unique Name	prot_L-elsbetiae_contig7547.16446.1
Type	polypeptide
Organism	Laminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length	95

Homology

[Close]

BLAST of mRNA_L-elsbetiae_contig7547.16446.1 vs. uniprot
Match: A0A7S2XQ82_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2XQ82_9STRA)

HSP 1 Score: 185 bits (469), Expect = 3.030e-58
Identity = 91/92 (98.91%), Postives = 91/92 (98.91%), Query Frame = 0

Query:    1 TGFKCGINYQPPTVVPGGDLARVQRAVCMVANTTAIAEALSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGAETA 92
            TGFKCGINYQPPTVVP GDLARVQRAVCMVANTTAIAEALSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGAETA
Sbjct:   66 TGFKCGINYQPPTVVPDGDLARVQRAVCMVANTTAIAEALSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGAETA 157

[Close]

BLAST of mRNA_L-elsbetiae_contig7547.16446.1 vs. uniprot
Match: A0A7S2X5D0_PROMC (Hypothetical protein n=1 Tax=Prorocentrum micans TaxID=2945 RepID=A0A7S2X5D0_PROMC)

HSP 1 Score: 183 bits (465), Expect = 3.760e-58
Identity = 87/95 (91.58%), Postives = 93/95 (97.89%), Query Frame = 0

Query:    1 TGFKCGINYQPPTVVPGGDLARVQRAVCMVANTTAIAEALSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGAETAEGE 95
            TGFKCGINYQPPTVVPGGDLA+VQRAVCM++N+TAIAE  SR+DHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGAETA+GE
Sbjct:   27 TGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTAIAEVFSRVDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGAETADGE 121

[Close]

BLAST of mRNA_L-elsbetiae_contig7547.16446.1 vs. uniprot
Match: A0A6G0R1R0_9STRA (Tubulin_C domain-containing protein (Fragment) n=4 Tax=Phytophthora TaxID=4783 RepID=A0A6G0R1R0_9STRA)

HSP 1 Score: 182 bits (462), Expect = 7.340e-58
Identity = 88/95 (92.63%), Postives = 92/95 (96.84%), Query Frame = 0

Query:    1 TGFKCGINYQPPTVVPGGDLARVQRAVCMVANTTAIAEALSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGAETAEGE 95
            TGFKCGINYQPP+VVPGGDLARVQRAVCM++NT+AIAE  SRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEV AETAEGE
Sbjct:   17 TGFKCGINYQPPSVVPGGDLARVQRAVCMISNTSAIAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVSAETAEGE 111

[Close]

BLAST of mRNA_L-elsbetiae_contig7547.16446.1 vs. uniprot
Match: TBA2_PELFA (Tubulin alpha-2 chain n=45 Tax=cellular organisms TaxID=131567 RepID=TBA2_PELFA)

HSP 1 Score: 192 bits (488), Expect = 1.070e-57
Identity = 95/95 (100.00%), Postives = 95/95 (100.00%), Query Frame = 0

Query:    1 TGFKCGINYQPPTVVPGGDLARVQRAVCMVANTTAIAEALSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGAETAEGE 95
            TGFKCGINYQPPTVVPGGDLARVQRAVCMVANTTAIAEALSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGAETAEGE
Sbjct:  349 TGFKCGINYQPPTVVPGGDLARVQRAVCMVANTTAIAEALSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGAETAEGE 443

[Close]

BLAST of mRNA_L-elsbetiae_contig7547.16446.1 vs. uniprot
Match: Q7Y246_GOSBA (Alpha-tubulin (Fragment) n=1 Tax=Gossypium barbadense TaxID=3634 RepID=Q7Y246_GOSBA)

HSP 1 Score: 181 bits (458), Expect = 2.110e-57
Identity = 85/94 (90.43%), Postives = 92/94 (97.87%), Query Frame = 0

Query:    1 TGFKCGINYQPPTVVPGGDLARVQRAVCMVANTTAIAEALSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGAETAEG 94
            TGFKCGINYQPPTVVPGGDLA+VQRAVCM++N+T++AE  SRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGAE+AEG
Sbjct:    7 TGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGAESAEG 100

[Close]

BLAST of mRNA_L-elsbetiae_contig7547.16446.1 vs. uniprot
Match: A0A7S0Q113_9EUKA (Tubulin alpha chain n=24 Tax=Eukaryota TaxID=2759 RepID=A0A7S0Q113_9EUKA)

HSP 1 Score: 191 bits (485), Expect = 2.990e-57
Identity = 94/95 (98.95%), Postives = 95/95 (100.00%), Query Frame = 0

Query:    1 TGFKCGINYQPPTVVPGGDLARVQRAVCMVANTTAIAEALSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGAETAEGE 95
            TGFKCGINYQPPTVVPGGDLARVQRAVCMV+NTTAIAEALSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGAETAEGE
Sbjct:  349 TGFKCGINYQPPTVVPGGDLARVQRAVCMVSNTTAIAEALSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGAETAEGE 443

[Close]

BLAST of mRNA_L-elsbetiae_contig7547.16446.1 vs. uniprot
Match: A0A835J434_9ROSI (Tubulin_C domain-containing protein n=1 Tax=Salix dunnii TaxID=1413687 RepID=A0A835J434_9ROSI)

HSP 1 Score: 181 bits (458), Expect = 4.530e-57
Identity = 85/95 (89.47%), Postives = 93/95 (97.89%), Query Frame = 0

Query:    1 TGFKCGINYQPPTVVPGGDLARVQRAVCMVANTTAIAEALSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGAETAEGE 95
            TGFKCGINYQPPTVVPGGDLA+VQRAVCM++N+T++AE  SRIDHKFDLMY+KRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGAE+AEGE
Sbjct:   30 TGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYSKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGAESAEGE 124

[Close]

BLAST of mRNA_L-elsbetiae_contig7547.16446.1 vs. uniprot
Match: A0A067C433_SAPPC (Tubulin_C domain-containing protein n=1 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067C433_SAPPC)

HSP 1 Score: 182 bits (462), Expect = 6.230e-57
Identity = 88/95 (92.63%), Postives = 91/95 (95.79%), Query Frame = 0

Query:    1 TGFKCGINYQPPTVVPGGDLARVQRAVCMVANTTAIAEALSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGAETAEGE 95
            TGFKCGINYQPPTVVPGGDLARVQRAVCM++NT+AIAE  SRIDHKFDLMYAKRAF HWYVGEGMEEGEFSEAREDLAALEKDYEEV AETAEGE
Sbjct:   82 TGFKCGINYQPPTVVPGGDLARVQRAVCMISNTSAIAEVFSRIDHKFDLMYAKRAFAHWYVGEGMEEGEFSEAREDLAALEKDYEEVSAETAEGE 176

[Close]

BLAST of mRNA_L-elsbetiae_contig7547.16446.1 vs. uniprot
Match: Q2WBI5_COCNU (Alpha tubulin (Fragment) n=1 Tax=Cocos nucifera TaxID=13894 RepID=Q2WBI5_COCNU)

HSP 1 Score: 179 bits (455), Expect = 7.550e-57
Identity = 86/95 (90.53%), Postives = 92/95 (96.84%), Query Frame = 0

Query:    1 TGFKCGINYQPPTVVPGGDLARVQRAVCMVANTTAIAEALSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGAETAEGE 95
            TGFKCGINYQPPTVVPGGDLA+VQRAVCMV+N+T++AE  SRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGAE+AE E
Sbjct:   11 TGFKCGINYQPPTVVPGGDLAKVQRAVCMVSNSTSVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGAESAEDE 105

[Close]

BLAST of mRNA_L-elsbetiae_contig7547.16446.1 vs. uniprot
Match: A0A7J8SZW8_GOSDV (Tubulin_C domain-containing protein n=2 Tax=rosids TaxID=71275 RepID=A0A7J8SZW8_GOSDV)

HSP 1 Score: 180 bits (457), Expect = 1.140e-56
Identity = 84/94 (89.36%), Postives = 92/94 (97.87%), Query Frame = 0

Query:    1 TGFKCGINYQPPTVVPGGDLARVQRAVCMVANTTAIAEALSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGAETAEG 94
            TGFKCGINYQPPTVVPGGDLA+VQRAVCM++N+T++AE  SRIDHKFDLMYAKRAF+HWYVGEGMEEGEFSEAREDLAALEKDYEEVGAE+AEG
Sbjct:   49 TGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYAKRAFIHWYVGEGMEEGEFSEAREDLAALEKDYEEVGAESAEG 142

The following BLAST results are available for this feature:

BLAST of mRNA_L-elsbetiae_contig7547.16446.1 vs. uniprot

BLAST of mRNA_L-elsbetiae_contig7547.16446.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A7S2XQ82_9STRA	3.030e-58	98.91	Hypothetical protein n=1 Tax=Attheya septentrional...	[more]
A0A7S2X5D0_PROMC	3.760e-58	91.58	Hypothetical protein n=1 Tax=Prorocentrum micans T...	[more]
A0A6G0R1R0_9STRA	7.340e-58	92.63	Tubulin_C domain-containing protein (Fragment) n=4...	[more]
TBA2_PELFA	1.070e-57	100.00	Tubulin alpha-2 chain n=45 Tax=cellular organisms ...	[more]
Q7Y246_GOSBA	2.110e-57	90.43	Alpha-tubulin (Fragment) n=1 Tax=Gossypium barbade...	[more]
A0A7S0Q113_9EUKA	2.990e-57	98.95	Tubulin alpha chain n=24 Tax=Eukaryota TaxID=2759 ...	[more]
A0A835J434_9ROSI	4.530e-57	89.47	Tubulin_C domain-containing protein n=1 Tax=Salix ...	[more]
A0A067C433_SAPPC	6.230e-57	92.63	Tubulin_C domain-containing protein n=1 Tax=Saprol...	[more]
Q2WBI5_COCNU	7.550e-57	90.53	Alpha tubulin (Fragment) n=1 Tax=Cocos nucifera Ta...	[more]
A0A7J8SZW8_GOSDV	1.140e-56	89.36	Tubulin_C domain-containing protein n=2 Tax=rosids...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 70..95
None	No IPR available	PANTHER	PTHR11588:SF302		coord: 1..93
IPR002452	Alpha tubulin	PRINTS	PR01162	ALPHATUBULIN	coord: 37..53 score: 81.36 coord: 12..31 score: 78.03 coord: 74..90 score: 90.81
IPR023123	Tubulin, C-terminal	GENE3D	1.10.287.600		coord: 36..89 e-value: 2.4E-34 score: 118.7
IPR018316	Tubulin/FtsZ, 2-layer sandwich domain	PFAM	PF03953	Tubulin_C	coord: 1..44 e-value: 5.4E-8 score: 33.0
IPR037103	Tubulin/FtsZ, C-terminal domain superfamily	GENE3D	3.30.1330.20		coord: 1..35 e-value: 1.6E-14 score: 55.8
IPR000217	Tubulin	PANTHER	PTHR11588	TUBULIN	coord: 1..93
IPR008280	Tubulin/FtsZ, C-terminal	SUPERFAMILY	55307	Tubulin C-terminal domain-like	coord: 1..88

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
L-elsbetiae_contig7547	contig	L-elsbetiae_contig7547:3..453 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW15	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_L-elsbetiae_contig7547.16446.1	mRNA_L-elsbetiae_contig7547.16446.1	Laminarionema elsbetiae ELsaHSoW15	mRNA	L-elsbetiae_contig7547 3..453 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_L-elsbetiae_contig7547.16446.1 ID=prot_L-elsbetiae_contig7547.16446.1|Name=mRNA_L-elsbetiae_contig7547.16446.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=95bp
TGFKCGINYQPPTVVPGGDLARVQRAVCMVANTTAIAEALSRIDHKFDLM
YAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGAETAEGE

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR002452	Alpha_tubulin
IPR023123	Tubulin_C
IPR018316	Tubulin/FtsZ_2-layer-sand-dom
IPR037103	Tubulin/FtsZ_C_sf
IPR000217	Tubulin
IPR008280	Tub_FtsZ_C