prot_L-elsbetiae_contig7544.16443.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig7544.16443.1
Unique Nameprot_L-elsbetiae_contig7544.16443.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length190
Homology
BLAST of mRNA_L-elsbetiae_contig7544.16443.1 vs. uniprot
Match: D7FLE0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLE0_ECTSI)

HSP 1 Score: 176 bits (447), Expect = 2.320e-50
Identity = 76/82 (92.68%), Postives = 79/82 (96.34%), Query Frame = 0
Query:   53 NALHDSDDGDDAVCPLCCEAMDLSDKNFLPCPCGYRVCMWCWHRIKENYTNLCPACRSEYADDPHAFAAVDKEEVIKNENSK 134
            NA +DSDDGDDAVCPLCCE MDLSDKNF+PCPCGYRVCMWCWHRIKENYT LCPACRSEYADDPHAFAAVDKEEVIKNEN+K
Sbjct:    5 NAFNDSDDGDDAVCPLCCEPMDLSDKNFVPCPCGYRVCMWCWHRIKENYTGLCPACRSEYADDPHAFAAVDKEEVIKNENNK 86          
BLAST of mRNA_L-elsbetiae_contig7544.16443.1 vs. uniprot
Match: A0A6H5JC61_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JC61_9PHAE)

HSP 1 Score: 176 bits (447), Expect = 2.910e-48
Identity = 76/82 (92.68%), Postives = 79/82 (96.34%), Query Frame = 0
Query:   53 NALHDSDDGDDAVCPLCCEAMDLSDKNFLPCPCGYRVCMWCWHRIKENYTNLCPACRSEYADDPHAFAAVDKEEVIKNENSK 134
            NA +DSDDGDDAVCPLCCE MDLSDKNF+PCPCGYRVCMWCWHRIKENYT LCPACRSEYADDPHAFAAVDKEEVIKNEN+K
Sbjct:    5 NAFNDSDDGDDAVCPLCCEPMDLSDKNFVPCPCGYRVCMWCWHRIKENYTGLCPACRSEYADDPHAFAAVDKEEVIKNENNK 86          
BLAST of mRNA_L-elsbetiae_contig7544.16443.1 vs. uniprot
Match: A0A835YKN6_9STRA (RING/Ubox like zinc-binding domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YKN6_9STRA)

HSP 1 Score: 133 bits (334), Expect = 1.290e-35
Identity = 56/79 (70.89%), Postives = 67/79 (84.81%), Query Frame = 0
Query:   57 DSD-DGDDAVCPLCCEAMDLSDKNFLPCPCGYRVCMWCWHRIKENYTNLCPACRSEYADDPHAFAAVDKEEVIKNENSK 134
            DSD D +D VCPLCCE +DLSDKNFLPC CGYRVC+WCWH IK++   LCPACR+ Y+DDPHAFAAVD+++VIK+E  K
Sbjct:    4 DSDNDSEDDVCPLCCEELDLSDKNFLPCQCGYRVCIWCWHTIKDHMNGLCPACRNPYSDDPHAFAAVDRDDVIKSEKRK 82          
BLAST of mRNA_L-elsbetiae_contig7544.16443.1 vs. uniprot
Match: A0A8J2SPL8_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SPL8_9STRA)

HSP 1 Score: 130 bits (327), Expect = 3.180e-33
Identity = 50/71 (70.42%), Postives = 62/71 (87.32%), Query Frame = 0
Query:   60 DGDDAVCPLCCEAMDLSDKNFLPCPCGYRVCMWCWHRIKENYTNLCPACRSEYADDPHAFAAVDKEEVIKN 130
            D D+ VCPLCCE +D+SD+NFLPC CGY+VCMWCWH IKEN  NLCPACR+ Y D+PHAF+AV+KEE+++N
Sbjct:    3 DSDEQVCPLCCEELDISDQNFLPCKCGYQVCMWCWHHIKENLNNLCPACRNPYHDNPHAFSAVEKEEIMRN 73          
BLAST of mRNA_L-elsbetiae_contig7544.16443.1 vs. uniprot
Match: A0A7S3NFX2_9STRA (Hypothetical protein n=4 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3NFX2_9STRA)

HSP 1 Score: 132 bits (332), Expect = 4.460e-33
Identity = 56/81 (69.14%), Postives = 65/81 (80.25%), Query Frame = 0
Query:   54 ALHDSDDGDDAVCPLCCEAMDLSDKNFLPCPCGYRVCMWCWHRIKENYTNLCPACRSEYADDPHAFAAVDKEEVIKNENSK 134
            A  D  D DD  CPLCCE +DLSD+NFLPC CGY+VCM+CW+RIKEN   LCPACR+ YADDPHAFAAVD+ EVIKN+  +
Sbjct:    2 AFGDDFDDDDLTCPLCCEELDLSDQNFLPCKCGYQVCMFCWYRIKENSNGLCPACRTPYADDPHAFAAVDRNEVIKNKKER 82          
BLAST of mRNA_L-elsbetiae_contig7544.16443.1 vs. uniprot
Match: A0A7S2R121_9STRA (Hypothetical protein (Fragment) n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2R121_9STRA)

HSP 1 Score: 120 bits (301), Expect = 5.220e-32
Identity = 48/73 (65.75%), Postives = 56/73 (76.71%), Query Frame = 0
Query:   62 DDAVCPLCCEAMDLSDKNFLPCPCGYRVCMWCWHRIKENYTNLCPACRSEYADDPHAFAAVDKEEVIKNENSK 134
            D+ VCPLCCE +D+SD  F PC CGY+VCMWCWHRIKE+   LCPACR+ Y DDPH F+AVD EEV+K    K
Sbjct:    3 DNDVCPLCCEELDISDLQFFPCKCGYQVCMWCWHRIKESECGLCPACRTPYGDDPHEFSAVDMEEVVKANKEK 75          
BLAST of mRNA_L-elsbetiae_contig7544.16443.1 vs. uniprot
Match: A0A482RU21_9ARCH (RING-type domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RU21_9ARCH)

HSP 1 Score: 119 bits (298), Expect = 5.860e-32
Identity = 48/68 (70.59%), Postives = 54/68 (79.41%), Query Frame = 0
Query:   59 DDGDDAVCPLCCEAMDLSDKNFLPCPCGYRVCMWCWHRIKENYTNLCPACRSEYADDPHAFAAVDKEE 126
            DD D   CPLC E +D SDKNFLPCPCGY+VCMWCWH I+EN   LCPACR+ Y+ DPHAFAAVD+ E
Sbjct:    7 DDADSLYCPLCVEEIDQSDKNFLPCPCGYQVCMWCWHHIRENLNGLCPACRTPYSADPHAFAAVDRTE 74          
BLAST of mRNA_L-elsbetiae_contig7544.16443.1 vs. uniprot
Match: A0A7S4D5P1_HETAK (Hypothetical protein (Fragment) n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D5P1_HETAK)

HSP 1 Score: 130 bits (326), Expect = 7.070e-32
Identity = 53/68 (77.94%), Postives = 58/68 (85.29%), Query Frame = 0
Query:   62 DDAVCPLCCEAMDLSDKNFLPCPCGYRVCMWCWHRIKENYTNLCPACRSEYADDPHAFAAVDKEEVIK 129
            +D  CPLCCE +DLSDKNF+PCPCGYRVCMWCWH IKEN   LCPACRS YADDPHAFAAV  EEV++
Sbjct:   19 EDDNCPLCCEELDLSDKNFVPCPCGYRVCMWCWHHIKENLNGLCPACRSPYADDPHAFAAVATEEVVE 86          
BLAST of mRNA_L-elsbetiae_contig7544.16443.1 vs. uniprot
Match: A0A7S2GN38_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2GN38_9STRA)

HSP 1 Score: 129 bits (323), Expect = 4.200e-31
Identity = 50/75 (66.67%), Postives = 61/75 (81.33%), Query Frame = 0
Query:   60 DGDDAVCPLCCEAMDLSDKNFLPCPCGYRVCMWCWHRIKENYTNLCPACRSEYADDPHAFAAVDKEEVIKNENSK 134
            D DD VCPLCCE +D+SDKNF+PC CGY+VCMWCWH IK +   LCPACR+ Y+DDPHAF+AVD++EV+K    K
Sbjct:    3 DSDDDVCPLCCEELDISDKNFMPCRCGYQVCMWCWHHIKNDLNGLCPACRTPYSDDPHAFSAVDRQEVLKQTRQK 77          
BLAST of mRNA_L-elsbetiae_contig7544.16443.1 vs. uniprot
Match: A0A1E7EU92_9STRA (RING-type domain-containing protein (Fragment) n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7EU92_9STRA)

HSP 1 Score: 119 bits (299), Expect = 2.310e-30
Identity = 46/70 (65.71%), Postives = 56/70 (80.00%), Query Frame = 0
Query:   65 VCPLCCEAMDLSDKNFLPCPCGYRVCMWCWHRIKENYTNLCPACRSEYADDPHAFAAVDKEEVIKNENSK 134
            VCPLCCE +D+SD+ F PC CGY+VCMWCWHRI+E+ + LCPACR+ Y DDPH F+AVD EEV+K    K
Sbjct:    1 VCPLCCEELDISDRQFFPCKCGYQVCMWCWHRIRESESGLCPACRTPYGDDPHEFSAVDVEEVLKANKEK 70          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig7544.16443.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FLE0_ECTSI2.320e-5092.68Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JC61_9PHAE2.910e-4892.68Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835YKN6_9STRA1.290e-3570.89RING/Ubox like zinc-binding domain-containing prot... [more]
A0A8J2SPL8_9STRA3.180e-3370.42Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A7S3NFX2_9STRA4.460e-3369.14Hypothetical protein n=4 Tax=Aureoumbra lagunensis... [more]
A0A7S2R121_9STRA5.220e-3265.75Hypothetical protein (Fragment) n=1 Tax=Eucampia a... [more]
A0A482RU21_9ARCH5.860e-3270.59RING-type domain-containing protein n=1 Tax=archae... [more]
A0A7S4D5P1_HETAK7.070e-3277.94Hypothetical protein (Fragment) n=2 Tax=Heterosigm... [more]
A0A7S2GN38_9STRA4.200e-3166.67Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A1E7EU92_9STRA2.310e-3065.71RING-type domain-containing protein (Fragment) n=1... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 121..141
NoneNo IPR availablePFAMPF14570zf-RING_4coord: 66..112
e-value: 6.0E-21
score: 74.0
NoneNo IPR availablePANTHERPTHR12603:SF0CCR4-NOT TRANSCRIPTION COMPLEX SUBUNIT 4coord: 58..141
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 61..119
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 54..130
e-value: 7.7E-24
score: 84.8
IPR039780CCR4-NOT transcription complex subunit 4PANTHERPTHR12603CCR4-NOT TRANSCRIPTION COMPLEX RELATEDcoord: 58..141
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 66..109
score: 9.804

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig7544contigL-elsbetiae_contig7544:1363..2566 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig7544.16443.1mRNA_L-elsbetiae_contig7544.16443.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig7544 1361..2566 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig7544.16443.1 ID=prot_L-elsbetiae_contig7544.16443.1|Name=mRNA_L-elsbetiae_contig7544.16443.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=190bp
SFSPPFSARRQRCFATSWYRSNVVPPQSPRPEGVARVSNRSSSHSNIVTM
SGNALHDSDDGDDAVCPLCCEAMDLSDKNFLPCPCGYRVCMWCWHRIKEN
YTNLCPACRSEYADDPHAFAAVDKEEVIKNENSKKKRAKQKDTDSAGAAA
AAAAAREHQHALHLRHHHQHQQHMQHLHREQVQQQGGGRG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013083Znf_RING/FYVE/PHD
IPR039780Mot2
IPR001841Znf_RING