prot_L-elsbetiae_contig7535.16435.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig7535.16435.1
Unique Nameprot_L-elsbetiae_contig7535.16435.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length113
Homology
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BLAST of mRNA_L-elsbetiae_contig7535.16435.1 vs. uniprot
Match: A0A6H5JXK0_9PHAE (RING-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXK0_9PHAE)

HSP 1 Score: 120 bits (301), Expect = 2.190e-29
Identity = 72/92 (78.26%), Postives = 79/92 (85.87%), Query Frame = 0 
Query:    1 MERQQALAEAVVRQMDTHELVAIASGRFGAGG-LLSRGRGRLSHR-SQAEQTAGVSQETRMSFIKLSAGRRSYAPSHGVAAAVTQPPATAAT 90
            MERQQALAEAVVRQMDTHELVAIASGRFG+GG LLSRGRGR + R  QAEQTAGVSQETRMSF+KLSAG+R +AP+H V A    PP+TA T
Sbjct:   38 MERQQALAEAVVRQMDTHELVAIASGRFGSGGGLLSRGRGRATRRFQQAEQTAGVSQETRMSFVKLSAGKRGHAPAHDVTA---PPPSTAVT 126
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BLAST of mRNA_L-elsbetiae_contig7535.16435.1 vs. uniprot
Match: D7G9H7_ECTSI (RING-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G9H7_ECTSI)

HSP 1 Score: 117 bits (292), Expect = 3.300e-28
Identity = 68/81 (83.95%), Postives = 72/81 (88.89%), Query Frame = 0 
Query:    1 MERQQALAEAVVRQMDTHELVAIASGRFGAGG-LLSRGRGRLSHR-SQAEQTAGVSQETRMSFIKLSAGRRSYAPSHGVAA 79
            MERQQALAEAVVRQMDTHELVAIASGRFG+GG LLSRGRGR S R  QAEQTAGVSQETRMSF+KLSAG+R  AP+H V A
Sbjct:    1 MERQQALAEAVVRQMDTHELVAIASGRFGSGGGLLSRGRGRASRRFQQAEQTAGVSQETRMSFVKLSAGKRGLAPAHDVTA 81
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig7535.16435.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JXK0_9PHAE2.190e-2978.26RING-type domain-containing protein n=1 Tax=Ectoca... [more]
D7G9H7_ECTSI3.300e-2883.95RING-type domain-containing protein n=1 Tax=Ectoca... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig7535contigL-elsbetiae_contig7535:5640..6979 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig7535.16435.1mRNA_L-elsbetiae_contig7535.16435.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig7535 5622..6979 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig7535.16435.1 ID=prot_L-elsbetiae_contig7535.16435.1|Name=mRNA_L-elsbetiae_contig7535.16435.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=113bp
MERQQALAEAVVRQMDTHELVAIASGRFGAGGLLSRGRGRLSHRSQAEQT
AGVSQETRMSFIKLSAGRRSYAPSHGVAAAVTQPPATAATVAPAVTIIMS
NPDDGERKSRQAI
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