prot_L-elsbetiae_contig7531.16432.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_L-elsbetiae_contig7531.16432.1
Unique Name	prot_L-elsbetiae_contig7531.16432.1
Type	polypeptide
Organism	Laminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length	130

Homology

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BLAST of mRNA_L-elsbetiae_contig7531.16432.1 vs. uniprot
Match: D7FUF4_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FUF4_ECTSI)

HSP 1 Score: 183 bits (465), Expect = 1.000e-55
Identity = 94/129 (72.87%), Postives = 106/129 (82.17%), Query Frame = 0

Query:    1 MKKAAKAAXXXXXXXXXXXXXXSAPGKMLYLEKGKDFLTEQMHIALGVIVLSALILGLVNGPGVWPRNLQQGAFPACFMVATGVMAYNSFLRQAREFDGGSLDDFFPAFAAAIAATLLANKGSAMQASA 129
            +KKAAK A              +  GKMLYLEKGKD +TEQ+H+ALGV+V+  L+L LVNGPGVWPRNLQQGAFPACFM+A+GV+AYNSFLRQARE DGGSLDDFFPAFAAA+AATLLA KGSAMQASA
Sbjct:  141 LKKAAKDAAKKAAAGIGA----AGGGKMLYLEKGKDVVTEQLHVALGVLVVVVLVLALVNGPGVWPRNLQQGAFPACFMIASGVLAYNSFLRQARESDGGSLDDFFPAFAAALAATLLARKGSAMQASA 265

The following BLAST results are available for this feature:

BLAST of mRNA_L-elsbetiae_contig7531.16432.1 vs. uniprot

BLAST of mRNA_L-elsbetiae_contig7531.16432.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
D7FUF4_ECTSI	1.000e-55	72.87	Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 72..90
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 125..129
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_N_REGION	Signal peptide N-region	coord: 1..14
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 27..41
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 91..104
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 42..60
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_C_REGION	Signal peptide C-region	coord: 23..26
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_H_REGION	Signal peptide H-region	coord: 15..22
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 61..71
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 105..124
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE	Signal Peptide	coord: 1..26
None	No IPR available	TMHMM	TMhelix		coord: 69..91
None	No IPR available	TMHMM	TMhelix		coord: 43..65

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
L-elsbetiae_contig7531	contig	L-elsbetiae_contig7531:8114..9501 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW15	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_L-elsbetiae_contig7531.16432.1	mRNA_L-elsbetiae_contig7531.16432.1	Laminarionema elsbetiae ELsaHSoW15	mRNA	L-elsbetiae_contig7531 8114..9510 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_L-elsbetiae_contig7531.16432.1 ID=prot_L-elsbetiae_contig7531.16432.1|Name=mRNA_L-elsbetiae_contig7531.16432.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=130bp
MKKAAKAAAKKAAKGVAAAAAASAPGKMLYLEKGKDFLTEQMHIALGVIV
LSALILGLVNGPGVWPRNLQQGAFPACFMVATGVMAYNSFLRQAREFDGG
SLDDFFPAFAAAIAATLLANKGSAMQASA*