prot_L-elsbetiae_contig753.16426.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig753.16426.1
Unique Nameprot_L-elsbetiae_contig753.16426.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length220
Homology
[Close]
BLAST of mRNA_L-elsbetiae_contig753.16426.1 vs. uniprot
Match: D7G869_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G869_ECTSI)

HSP 1 Score: 267 bits (683), Expect = 6.640e-88
Identity = 166/219 (75.80%), Postives = 179/219 (81.74%), Query Frame = 0 
Query:    1 MAGKAFENEELRLFHKACMNGRALEIANAKSISPSLLNARSVVTGRTAVHEACANGHRDTLEQLLKRGADMQKTTFLGXXXXXXXXXXXXXXXXXXXXXXXXXXPNATNNYSATCFHYAGGKPAIAKLLLRYGGKVSVRDSSKKTPWDCVHEKCSGNRELNKMMKEAFDREEKERAQAELALVKEEEDHANAKRREANESRKRANIEKTASEYRKWRGG 219
            M GKAFE+EELR+FHKAC  G+ LEIANAK ISP LLN RSVVTGRTAVHEACANGHRD LEQLLKRGAD QKTTFLG  XXXXXXXXXXXXXXXXXXXXXXX PN  N YSAT FHYAG KP IAKLLLRYGGKVS+RD+S+KTPWD VHE+C  NRELNK+MKEAFDREE+ RA+AELA VK              E+R+R  IEKTAS YR+WRGG
Sbjct:    1 MTGKAFESEELRVFHKACREGKTLEIANAKFISPDLLNTRSVVTGRTAVHEACANGHRDALEQLLKRGADTQKTTFLGGDXXXXXXXXXXXXXXXXXXXXXXXDPNVPNKYSATSFHYAGSKPTIAKLLLRYGGKVSLRDNSRKTPWDRVHEECPDNRELNKLMKEAFDREEEARARAELARVKXXXXXXXXXXXXXXEARERGKIEKTASAYRQWRGG 219
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig753.16426.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G869_ECTSI6.640e-8875.80Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 157..203
NoneNo IPR availablePANTHERPTHR24193ANKYRIN REPEAT PROTEINcoord: 81..177
coord: 44..119
IPR002110Ankyrin repeatPRINTSPR01415ANKYRINcoord: 45..60
score: 35.45
coord: 94..108
score: 41.24
IPR002110Ankyrin repeatSMARTSM00248ANK_2acoord: 78..107
e-value: 0.0033
score: 26.7
coord: 44..73
e-value: 1.8E-4
score: 30.8
coord: 111..138
e-value: 340.0
score: 8.5
IPR002110Ankyrin repeatPFAMPF00023Ankcoord: 79..110
e-value: 2.2E-5
score: 24.7
IPR002110Ankyrin repeatPFAMPF13606Ank_3coord: 45..70
e-value: 6.9E-4
score: 19.9
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 44..76
score: 11.541
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 78..110
score: 13.33
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 7..200
e-value: 2.7E-31
score: 110.3
IPR036770Ankyrin repeat-containing domain superfamilySUPERFAMILY48403Ankyrin repeatcoord: 13..152
IPR020683Ankyrin repeat-containing domainPROSITEPS50297ANK_REP_REGIONcoord: 44..146
score: 25.116

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig753contigL-elsbetiae_contig753:1795..3961 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig753.16426.1mRNA_L-elsbetiae_contig753.16426.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig753 1795..4418 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig753.16426.1 ID=prot_L-elsbetiae_contig753.16426.1|Name=mRNA_L-elsbetiae_contig753.16426.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=220bp
MAGKAFENEELRLFHKACMNGRALEIANAKSISPSLLNARSVVTGRTAVH
EACANGHRDTLEQLLKRGADMQKTTFLGGDTALHLAVNSGERSLVFSLLR
AGADPNATNNYSATCFHYAGGKPAIAKLLLRYGGKVSVRDSSKKTPWDCV
HEKCSGNRELNKMMKEAFDREEKERAQAELALVKEEEDHANAKRREANES
RKRANIEKTASEYRKWRGG*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002110Ankyrin_rpt
IPR036770Ankyrin_rpt-contain_sf
IPR020683Ankyrin_rpt-contain_dom