prot_L-elsbetiae_contig7529.16425.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig7529.16425.1
Unique Nameprot_L-elsbetiae_contig7529.16425.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length176
Homology
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BLAST of mRNA_L-elsbetiae_contig7529.16425.1 vs. uniprot
Match: D8LDF5_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LDF5_ECTSI)

HSP 1 Score: 200 bits (509), Expect = 1.510e-60
Identity = 107/149 (71.81%), Postives = 121/149 (81.21%), Query Frame = 0 
Query:    2 SLAKRPASKLALASFLTSAVSAGEVALSSAMAGTGGSRSRGWGALVAQAFAELEPLPLKSYSEEFSSGLAPVNTLRGLWRTREIQSDGSVLPQEGGRLGQKGICGGRLSLKGFVGAGKGTVEYRGCGDREGKGRWLTKPKHVVNGRSCL 150
            SLA++  + +ALA+ LT AV  GEV +S  +AG GG       A    AFAELEPLPLKSYSEEFSSGLAPVNT+RGLWRTRE ++DGS LPQE GRLG+KGICGGRLS KGFVGAGKGTVEY+GCGDREGKGRWLTKPK++VNGR  L
Sbjct:  118 SLARQALATVALAAVLTPAVFIGEVTVSPLLAGKGGV------APPTAAFAELEPLPLKSYSEEFSSGLAPVNTVRGLWRTRETRNDGSALPQEAGRLGRKGICGGRLSFKGFVGAGKGTVEYKGCGDREGKGRWLTKPKNIVNGRITL 260
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig7529.16425.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LDF5_ECTSI1.510e-6071.81Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 11..18
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..23
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..10
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 19..23
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 24..175
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..23
score: 0.649

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig7529contigL-elsbetiae_contig7529:5185..6918 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig7529.16425.1mRNA_L-elsbetiae_contig7529.16425.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig7529 2065..7628 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig7529.16425.1 ID=prot_L-elsbetiae_contig7529.16425.1|Name=mRNA_L-elsbetiae_contig7529.16425.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=176bp
MSLAKRPASKLALASFLTSAVSAGEVALSSAMAGTGGSRSRGWGALVAQA
FAELEPLPLKSYSEEFSSGLAPVNTLRGLWRTREIQSDGSVLPQEGGRLG
QKGICGGRLSLKGFVGAGKGTVEYRGCGDREGKGRWLTKPKHVVNGRSCL
LYNRGKAKRRVRVETIQGKRSITVL*
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