prot_L-elsbetiae_contig7528.16424.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig7528.16424.1
Unique Nameprot_L-elsbetiae_contig7528.16424.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length67
Homology
BLAST of mRNA_L-elsbetiae_contig7528.16424.1 vs. uniprot
Match: D8LCZ5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCZ5_ECTSI)

HSP 1 Score: 145 bits (367), Expect = 4.360e-39
Identity = 63/67 (94.03%), Postives = 65/67 (97.01%), Query Frame = 0
Query:    1 RYWRQARSPGEIQRDLRRDVTGMDGLVGLWGCDEGQGSSLTDWTDNHACCLGRGGTEWVDVPHGAPV 67
            RYWRQAR+PGEI RDLRRDV+GMDGLVGLWGCDEGQGSSLTDWTDNHACCLGRGGTEWVDVP GAPV
Sbjct: 5586 RYWRQARTPGEILRDLRRDVSGMDGLVGLWGCDEGQGSSLTDWTDNHACCLGRGGTEWVDVPRGAPV 5652          
BLAST of mRNA_L-elsbetiae_contig7528.16424.1 vs. uniprot
Match: A0A6H5KT07_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KT07_9PHAE)

HSP 1 Score: 145 bits (367), Expect = 4.360e-39
Identity = 63/67 (94.03%), Postives = 65/67 (97.01%), Query Frame = 0
Query:    1 RYWRQARSPGEIQRDLRRDVTGMDGLVGLWGCDEGQGSSLTDWTDNHACCLGRGGTEWVDVPHGAPV 67
            RYWRQAR+PGEI RDLRRDV+GMDGLVGLWGCDEGQGSSLTDWTDNHACCLGRGGTEWVDVP GAPV
Sbjct: 6130 RYWRQARTPGEILRDLRRDVSGMDGLVGLWGCDEGQGSSLTDWTDNHACCLGRGGTEWVDVPRGAPV 6196          
BLAST of mRNA_L-elsbetiae_contig7528.16424.1 vs. uniprot
Match: A0A562IJS8_MICOL (Concanavalin A-like lectin/glucanase superfamily protein n=1 Tax=Micromonospora olivasterospora TaxID=1880 RepID=A0A562IJS8_MICOL)

HSP 1 Score: 57.4 bits (137), Expect = 5.580e-8
Identity = 33/68 (48.53%), Postives = 40/68 (58.82%), Query Frame = 0
Query:    1 RYWRQARSPGEIQRDLRRDVTGMD-GLVGLWGCDEGQGSSLTDWTDNHACCLGRGGTEWVDVPHGAPV 67
            R W QAR  G++ RD RR + G++ GLV  +  DEG GSS+ D TDN      RGG  WV    GAPV
Sbjct:  478 RIWSQARPVGDLARDFRRRLAGVEPGLVAYYRFDEGAGSSVADHTDNGFDGTVRGGAVWVTS--GAPV 543          
BLAST of mRNA_L-elsbetiae_contig7528.16424.1 vs. uniprot
Match: A0A7X8QSK0_9BACT (LamG domain-containing protein (Fragment) n=1 Tax=Lentisphaerae bacterium TaxID=1932692 RepID=A0A7X8QSK0_9BACT)

HSP 1 Score: 50.1 bits (118), Expect = 2.110e-5
Identity = 22/45 (48.89%), Postives = 30/45 (66.67%), Query Frame = 0
Query:    1 RYWRQARSPGEIQRDLRRDVTGMD-GLVGLWGCDEGQGSSLTDWT 44
            R W  ARS GEI  D+   +TG + GL+G W  DEG+G+++ DWT
Sbjct:  163 RVWNYARSGGEILMDMETRLTGAEAGLIGYWPLDEGEGTTVYDWT 207          
BLAST of mRNA_L-elsbetiae_contig7528.16424.1 vs. uniprot
Match: A0A7Y3I243_9BACT (EF-hand domain-containing protein n=1 Tax=Phycisphaerales bacterium TaxID=2052180 RepID=A0A7Y3I243_9BACT)

HSP 1 Score: 49.7 bits (117), Expect = 2.890e-5
Identity = 25/66 (37.88%), Postives = 35/66 (53.03%), Query Frame = 0
Query:    1 RYWRQARSPGEIQRDLRRDVTGMDGLVGLWGCDEGQGSSLTDWTDNHACCLGRGGTEWVDVPHGAP 66
            R W  AR+  +I+  +   VT   GLVG WG +EG G+S+ D + N    +  G   W+D   GAP
Sbjct:  212 RVWSIARTAADIRATMNESVTSAPGLVGRWGLNEGDGTSVADSSGNDVNGIIVGNAAWID---GAP 274          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig7528.16424.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D8LCZ5_ECTSI4.360e-3994.03Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KT07_9PHAE4.360e-3994.03Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A562IJS8_MICOL5.580e-848.53Concanavalin A-like lectin/glucanase superfamily p... [more]
A0A7X8QSK0_9BACT2.110e-548.89LamG domain-containing protein (Fragment) n=1 Tax=... [more]
A0A7Y3I243_9BACT2.890e-537.88EF-hand domain-containing protein n=1 Tax=Phycisph... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D2.60.120.200coord: 1..52
e-value: 1.7E-5
score: 26.8

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig7528contigL-elsbetiae_contig7528:8932..9132 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig7528.16424.1mRNA_L-elsbetiae_contig7528.16424.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig7528 8932..9132 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig7528.16424.1 ID=prot_L-elsbetiae_contig7528.16424.1|Name=mRNA_L-elsbetiae_contig7528.16424.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=67bp
RYWRQARSPGEIQRDLRRDVTGMDGLVGLWGCDEGQGSSLTDWTDNHACC
LGRGGTEWVDVPHGAPV
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