prot_L-elsbetiae_contig7521.16413.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_L-elsbetiae_contig7521.16413.1
Unique Name	prot_L-elsbetiae_contig7521.16413.1
Type	polypeptide
Organism	Laminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length	246

Homology

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BLAST of mRNA_L-elsbetiae_contig7521.16413.1 vs. uniprot
Match: D8LLB7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLB7_ECTSI)

HSP 1 Score: 192 bits (488), Expect = 3.160e-56
Identity = 111/204 (54.41%), Postives = 131/204 (64.22%), Query Frame = 0

Query:   48 LGPTVTVTRERQYRDSFDDGLLYKGGGLDSQKLRRLLRSKCFAESEAAPTAEDMAGQWAARDGQWQLINSPAAVEQPSDGLADATTVHGGRNA-LDTEGTRTMLLPGGITVRSGPWRPEDESSGTSAAXXXXXXXXXGTSGAASIGKAG---------WAVEVGWFL--GGEKGGAGERSKNERVVLTTVLDAKSMTPLAVWRG 239
            LGP VTVTRER+YRD FDDGLLYKGGGLDSQKLR LLRSKCFAE E +PT +D+AG W +  G WQL  + AA        A A T  GG     +T G +T+LLPGGITVRSGPW     + GTS+A         G +GAA  G+           WAVEVGWF+  GGE G +   S+ +R VLTTV+DA++MTPL  WRG
Sbjct:  154 LGPIVTVTRERKYRDDFDDGLLYKGGGLDSQKLRGLLRSKCFAEYEESPTTDDLAGNWVSGPGHWQLFRTHAAGGSAP--RACAPTGGGGATFDRETAGIKTLLLPGGITVRSGPWLGAAAADGTSSAPEKRW----GAAGAALAGETAGFPTEEAEPWAVEVGWFVVEGGEGGASAAISREKREVLTTVVDARTMTPLGAWRG 351

[Close]

BLAST of mRNA_L-elsbetiae_contig7521.16413.1 vs. uniprot
Match: A0A6H5JTW3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTW3_9PHAE)

HSP 1 Score: 187 bits (474), Expect = 6.160e-53
Identity = 108/205 (52.68%), Postives = 128/205 (62.44%), Query Frame = 0

Query:   48 LGPTVTVTRERQYRDSFDDGLLYKGGGLDSQKLRRLLRSKCFAESEAAPTAEDMAGQWAARDGQWQLINSPAAVEQPSDGLADATTVHGGRNALDTE--GTRTMLLPGGITVRSGPWRPEDESSGTSAAXXXXXXXXXGTSGAASIGKAG---------WAVEVGWFL--GGEKGGAGERSKNERVVLTTVLDAKSMTPLAVWRG 239
            LGP VTVTRER+YR+ FDDGLLYKGGGLDSQKLR LLRSKCFAE E +PT +D+AG W +  G WQL  + AA           T   GG  A D E  G +T+LLPGGITVRSGPW     + GTS+A         G +GAA  G+           WAVEVGWF+   GE G +   S+ +R VLTTV+DA++ TPL  WRG
Sbjct:  272 LGPIVTVTRERRYRNDFDDGLLYKGGGLDSQKLRGLLRSKCFAECEESPTTDDLAGNWVSGPGHWQLFRTHAAGGSAP---RACTPTDGGGVAFDRETAGIKTLLLPGGITVRSGPWLGAAAADGTSSAPEKRW----GAAGAALAGETAGFPTEEAEPWAVEVGWFVVEDGEGGASAAISREKREVLTTVVDARTTTPLGAWRG 469

The following BLAST results are available for this feature:

BLAST of mRNA_L-elsbetiae_contig7521.16413.1 vs. uniprot

BLAST of mRNA_L-elsbetiae_contig7521.16413.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
D8LLB7_ECTSI	3.160e-56	54.41	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A6H5JTW3_9PHAE	6.160e-53	52.68	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 1..21

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
L-elsbetiae_contig7521	contig	L-elsbetiae_contig7521:5274..7441 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW15	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_L-elsbetiae_contig7521.16413.1	mRNA_L-elsbetiae_contig7521.16413.1	Laminarionema elsbetiae ELsaHSoW15	mRNA	L-elsbetiae_contig7521 4544..8639 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_L-elsbetiae_contig7521.16413.1 ID=prot_L-elsbetiae_contig7521.16413.1|Name=mRNA_L-elsbetiae_contig7521.16413.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=246bp
MATAEGDAAEAENERSRLRVEFRVDDSSASGNGSGGGGGDEEEAAAVLGP
TVTVTRERQYRDSFDDGLLYKGGGLDSQKLRRLLRSKCFAESEAAPTAED
MAGQWAARDGQWQLINSPAAVEQPSDGLADATTVHGGRNALDTEGTRTML
LPGGITVRSGPWRPEDESSGTSAAAAAAVASSAGTSGAASIGKAGWAVEV
GWFLGGEKGGAGERSKNERVVLTTVLDAKSMTPLAVWRGVVEKRK*