prot_L-elsbetiae_contig7490.16381.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig7490.16381.1
Unique Nameprot_L-elsbetiae_contig7490.16381.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length426
Homology
BLAST of mRNA_L-elsbetiae_contig7490.16381.1 vs. uniprot
Match: A0A6H5L4I3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4I3_9PHAE)

HSP 1 Score: 217 bits (552), Expect = 2.160e-58
Identity = 178/381 (46.72%), Postives = 190/381 (49.87%), Query Frame = 0
Query:   15 LHRLGLVWCERAAPPLLLADTGGGSXXXXXXGLWRDCLAIVRNLTLLNNARGSSGXXXXXXXXXXXXXXXXXXWNSTPADGAGEDALARESTALCDQTVVLDGKGVRSALRLAAHPVNAPAKELLGLLESLVLRAARSRAMYKASGGTXXXXXXXXXXXXXXXXXXXXXXXGGAMATPAKKPRLIAMSPSSASPAGRGSGKNAAGMGSTGSAAASTGAAGGLGASWAARHGAXXXXXXXXXXXAAGMLVVKKADVEKGILVE-----------LFNLSFHKVPRKKSTTNVMAMHNFVSNFSDTTKTGRGYGGGXSNSGSSSPRFGSVGGAF-QPSRSAFGGSTGXXXXXX---------FWGDVLYRGQRAEMAHRARAS 374
            LHRL LVWCERAAPPLLLAD  G         LWRDCLAIVRNLTLLN AR S  XXXXXXXX                DG+ E+A+A+ES ALCD TVVLDG+G+RSALRLAAHPVNAPAKELL LLESLVLRAARSR M+KA  G                                                                                                 A  L+VKKADVE GILVE           LF LSFHK PRK+  +NVMAMHN VSN +       G  G X     SSPRFGS  GAF QP R   GG   XXXXXX         FWGDVL+RGQRAEMAHRAR S
Sbjct:  826 LHRLSLVWCERAAPPLLLADDSGEGG-----SLWRDCLAIVRNLTLLNTARASGXXXXXXXXXGP--------------DGSAEEAIAKESAALCDNTVVLDGEGMRSALRLAAHPVNAPAKELLALLESLVLRAARSRVMHKAGSG------------------------------------------------------------------------------------------------GASTLIVKKADVEDGILVEVGVGVPFFAAALFKLSFHKPPRKRPASNVMAMHNLVSNMT-------GDNGXXXXXXXSSPRFGSSSGAFVQPGRD--GGXXXXXXXXXXXXXXXXXGFWGDVLFRGQRAEMAHRARKS 1082          
BLAST of mRNA_L-elsbetiae_contig7490.16381.1 vs. uniprot
Match: D8LJ22_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJ22_ECTSI)

HSP 1 Score: 199 bits (505), Expect = 1.760e-57
Identity = 113/161 (70.19%), Postives = 121/161 (75.16%), Query Frame = 0
Query:    1 MRSVRAKFLKDFSPLHRLGLVWCERAAPPLLLADTGGGSXXXXXXGLWRDCLAIVRNLTLLNNARGSSGXXXXXXXXXXXXXXXXXXWNSTPADGAGEDALARESTALCDQTVVLDGKGVRSALRLAAHPVNAPAKELLGLLESLVLRAARSRAMYKASGG 161
            MR VRAKFLKDF+PLHRLGLVWCERAAPPLLLAD  G         LWRDCLAIVRNLTLLNNAR S  XXXXX                   DG+ E+A+A+ES ALCD TVVLDG+G+RSALRLAAHPVNAPAKELL LLESLVLRAARSR M+K SGG
Sbjct:    1 MRLVRAKFLKDFAPLHRLGLVWCERAAPPLLLADDSGEGG-----SLWRDCLAIVRNLTLLNNARASGXXXXXXGP-----------------DGSAEEAIAKESAALCDNTVVLDGEGMRSALRLAAHPVNAPAKELLALLESLVLRAARSRVMHKVSGG 139          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig7490.16381.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5L4I3_9PHAE2.160e-5846.72Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LJ22_ECTSI1.760e-5770.19Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig7490contigL-elsbetiae_contig7490:3122..7407 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig7490.16381.1mRNA_L-elsbetiae_contig7490.16381.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig7490 3122..7407 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig7490.16381.1 ID=prot_L-elsbetiae_contig7490.16381.1|Name=mRNA_L-elsbetiae_contig7490.16381.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=426bp
MRSVRAKFLKDFSPLHRLGLVWCERAAPPLLLADTGGGSGDGNGNGLWRD
CLAIVRNLTLLNNARGSSGSGSGGGGGGGGGGGGGGGWNSTPADGAGEDA
LARESTALCDQTVVLDGKGVRSALRLAAHPVNAPAKELLGLLESLVLRAA
RSRAMYKASGGTAAAPPLSGGGSSSSGGGGGGSGSGGAMATPAKKPRLIA
MSPSSASPAGRGSGKNAAGMGSTGSAAASTGAAGGLGASWAARHGAGAGA
GPGGGAGAAGMLVVKKADVEKGILVELFNLSFHKVPRKKSTTNVMAMHNF
VSNFSDTTKTGRGYGGGGSNSGSSSPRFGSVGGAFQPSRSAFGGSTGGGG
GGGFWGDVLYRGQRAEMAHRARASGGGGGSAFRSREGSDSEESLELDGGG
SGRRRSRGDGTRGGSGSGSGDGYSSP
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