prot_L-elsbetiae_contig7471.16360.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_L-elsbetiae_contig7471.16360.1
Unique Name	prot_L-elsbetiae_contig7471.16360.1
Type	polypeptide
Organism	Laminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length	516

Homology

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BLAST of mRNA_L-elsbetiae_contig7471.16360.1 vs. uniprot
Match: D8LIF5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIF5_ECTSI)

HSP 1 Score: 200 bits (508), Expect = 3.740e-54
Identity = 224/555 (40.36%), Postives = 288/555 (51.89%), Query Frame = 0

Query:    3 LLGKKIRTQASQLAQLNETLQQEGSYSRLLERRLLQFDPEHPLPVTPQHLGRG--------------GGLGQPKQQKSAAASTVCGRRKDREDGDDMRRGYAAAQERLKDAAQLIRTLREALASR---------------------------------DEDANAAADRARMFQREASDLRRKLDTMAATTSTAFGTHARASKAAAAAPGRGEEKTVRFSMEAVGTGGERRGNDGGGCADQQQXXXXXXXXXXXXXLEREARRLRRELQEQREACAAAEAEGDELQATLRRISCS--VGG-GCRCQGRAESASAAAGAAGVAEPVRELPPARPTTASGRPGVTGSRSCLHRASSESGRVGSGDSGXXXXXXXXXXXXXXXXXXPQRARSSSGTRGGSSSSNASICKASHGKSPSAEAGRGRGGGLRPATSACRRGGRDAAQGREKKGAGEGGGELDDEREALLDYVEDLLDRIKGLEAACACLERERGESSRLAEGLQVMREEVQQKKRQLAQAQAVLEKLRQAMEAGRAEKDEMGRLYNELLEQLRTAEEEKEEL 507
            +L  KIR QA +LA L E LQ+E +YSRL+E+RL++ DPEH LPVTP HLGR               GGLG+    + A    +     D +DG  +R+GY AAQ RL+DAAQLIRTLREAL SR                                 D DANAAA+RAR +QREA DLRR+L+       T+ G  +RASK  +     GE +T    +     GGE+    G     +               L ++  RL ++L+EQREA  AA  E + L  TL+++  S  VG    + +G A+ A A A     AE  R+L  A              R  L            G   XXXXXXXXXXXXX         RS+S     SS  +A +  A+ G   +  AG       +PA  AC  GG  AA   E+ GA  GG EL+ E+EALLDYV+DLL RIKGLEAACA LERERG+SS     L+  R+++QQK++ +AQ    +E L++        K+EMGRLYNELL+QL+TAEEEKE+L
Sbjct:    1 MLCTKIRNQAKELAALTERLQEEAAYSRLVEKRLVELDPEHSLPVTPHHLGRRSPESTIAHRSSGSVGGLGRGYHLQKA--DQLSNEEHDHDDG--LRQGYEAAQARLRDAAQLIRTLREALESRGEFRGDSHVAARAQPDAIAGVFGTTGLPWMPTWDADANAAANRARKYQREADDLRRRLE-------TSGGNVSRASKGGSGGGRVGENQTSSSPL-----GGEQ--GHGRELGIRFVDDDRARQHQQHVELSKDVERLEQKLREQREATTAARTEANGLHETLKQLQQSHHVGNLSSQREGAADDAKANA-----AELARQLARAXXXXXXXXXENKNLRLQLREL--------GGXXXXXXXXXXXXXXXXSSHISKTMPRSTS-IASSSSGGHAIVAAAALGGRHTPAAG------SKPAL-ACELGGTRAANVEEEGGADRGGNELEAEKEALLDYVQDLLGRIKGLEAACASLERERGDSSI---NLEKTRKDLQQKEKAIAQ----IEDLQKTXXXXXXXKEEMGRLYNELLKQLKTAEEEKEKL 509

The following BLAST results are available for this feature:

BLAST of mRNA_L-elsbetiae_contig7471.16360.1 vs. uniprot

BLAST of mRNA_L-elsbetiae_contig7471.16360.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
D8LIF5_ECTSI	3.740e-54	40.36	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 192..242
None	No IPR available	COILS	Coil	Coil	coord: 89..109
None	No IPR available	COILS	Coil	Coil	coord: 117..137
None	No IPR available	COILS	Coil	Coil	coord: 417..437
None	No IPR available	COILS	Coil	Coil	coord: 445..510

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
L-elsbetiae_contig7471	contig	L-elsbetiae_contig7471:144..7325 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW15	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_L-elsbetiae_contig7471.16360.1	mRNA_L-elsbetiae_contig7471.16360.1	Laminarionema elsbetiae ELsaHSoW15	mRNA	L-elsbetiae_contig7471 144..7325 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_L-elsbetiae_contig7471.16360.1 ID=prot_L-elsbetiae_contig7471.16360.1|Name=mRNA_L-elsbetiae_contig7471.16360.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=516bp
EDLLGKKIRTQASQLAQLNETLQQEGSYSRLLERRLLQFDPEHPLPVTPQ
HLGRGGGLGQPKQQKSAAASTVCGRRKDREDGDDMRRGYAAAQERLKDAA
QLIRTLREALASRDEDANAAADRARMFQREASDLRRKLDTMAATTSTAFG
THARASKAAAAAPGRGEEKTVRFSMEAVGTGGERRGNDGGGCADQQQQQQ
QQQQRQQREELEREARRLRRELQEQREACAAAEAEGDELQATLRRISCSV
GGGCRCQGRAESASAAAGAAGVAEPVRELPPARPTTASGRPGVTGSRSCL
HRASSESGRVGSGDSGGGGGGGSGGGVGGGCGGGPQRARSSSGTRGGSSS
SNASICKASHGKSPSAEAGRGRGGGLRPATSACRRGGRDAAQGREKKGAG
EGGGELDDEREALLDYVEDLLDRIKGLEAACACLERERGESSRLAEGLQV
MREEVQQKKRQLAQAQAVLEKLRQAMEAGRAEKDEMGRLYNELLEQLRTA
EEEKEELRVGGDEGE*