mRNA_L-elsbetiae_contig7471.16360.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig7471.16360.1
Unique NamemRNA_L-elsbetiae_contig7471.16360.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
[Close]
BLAST of mRNA_L-elsbetiae_contig7471.16360.1 vs. uniprot
Match: D8LIF5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIF5_ECTSI)

HSP 1 Score: 200 bits (508), Expect = 3.740e-54
Identity = 224/555 (40.36%), Postives = 288/555 (51.89%), Query Frame = 1 
Query:    7 LLGKKIRTQASQLAQLNETLQQEGSYSRLLERRLLQFDPEHPLPVTPQHLGRG--------------GGLGQPKQQKSAAASTVCGRRKDREDGDDMRRGYAAAQERLKDAAQLIRTLREALASR---------------------------------DEDANAAADRARMFQREASDLRRKLDTMAATTSTAFGTHARASKAAAAAPGRGEEKTVRFSMEAVGTGGERRGNDGGGCADQQQXXXXXXXXXXXXXLEREARRLRRELQEQREACAAAEAEGDELQATLRRISCS--VGG-GCRCQGRAESASAAAGAAGVAEPVRELPPARPTTASGRPGVTGSRSCLHRASSESGRVGSGDSGXXXXXXXXXXXXXXXXXXPQRARSSSGTRGGSSSSNASICKASHGKSPSAEAGRGRGGGLRPATSACRRGGRDAAQGREKKGAGEGGGELDDEREALLDYVEDLLDRIKGLEAACACLERERGESSRLAEGLQVMREEVQQKKRQLAQAQAVLEKLRQAMEAGRAEKDEMGRLYNELLEQLRTAEEEKEEL 1521
            +L  KIR QA +LA L E LQ+E +YSRL+E+RL++ DPEH LPVTP HLGR               GGLG+    + A    +     D +DG  +R+GY AAQ RL+DAAQLIRTLREAL SR                                 D DANAAA+RAR +QREA DLRR+L+       T+ G  +RASK  +     GE +T    +     GGE+    G     +               L ++  RL ++L+EQREA  AA  E + L  TL+++  S  VG    + +G A+ A A A     AE  R+L  A              R  L            G   XXXXXXXXXXXXX         RS+S     SS  +A +  A+ G   +  AG       +PA  AC  GG  AA   E+ GA  GG EL+ E+EALLDYV+DLL RIKGLEAACA LERERG+SS     L+  R+++QQK++ +AQ    +E L++        K+EMGRLYNELL+QL+TAEEEKE+L
Sbjct:    1 MLCTKIRNQAKELAALTERLQEEAAYSRLVEKRLVELDPEHSLPVTPHHLGRRSPESTIAHRSSGSVGGLGRGYHLQKA--DQLSNEEHDHDDG--LRQGYEAAQARLRDAAQLIRTLREALESRGEFRGDSHVAARAQPDAIAGVFGTTGLPWMPTWDADANAAANRARKYQREADDLRRRLE-------TSGGNVSRASKGGSGGGRVGENQTSSSPL-----GGEQ--GHGRELGIRFVDDDRARQHQQHVELSKDVERLEQKLREQREATTAARTEANGLHETLKQLQQSHHVGNLSSQREGAADDAKANA-----AELARQLARAXXXXXXXXXENKNLRLQLREL--------GGXXXXXXXXXXXXXXXXSSHISKTMPRSTS-IASSSSGGHAIVAAAALGGRHTPAAG------SKPAL-ACELGGTRAANVEEEGGADRGGNELEAEKEALLDYVQDLLGRIKGLEAACASLERERGDSSI---NLEKTRKDLQQKEKAIAQ----IEDLQKTXXXXXXXKEEMGRLYNELLKQLKTAEEEKEKL 509
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig7471.16360.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LIF5_ECTSI3.740e-5440.36Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig7471contigL-elsbetiae_contig7471:144..7325 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Exons7
Model size1548
Cds size1548
Stop1
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816831.250897-CDS-L-elsbetiae_contig7471:143..2991622816831.250897-CDS-L-elsbetiae_contig7471:143..299Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7471 144..299 -
1691683846.4898589-CDS-L-elsbetiae_contig7471:143..2991691683846.4898589-CDS-L-elsbetiae_contig7471:143..299Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7471 144..299 -
1622816831.2641916-CDS-L-elsbetiae_contig7471:2019..20641622816831.2641916-CDS-L-elsbetiae_contig7471:2019..2064Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7471 2020..2064 -
1691683846.5047834-CDS-L-elsbetiae_contig7471:2019..20641691683846.5047834-CDS-L-elsbetiae_contig7471:2019..2064Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7471 2020..2064 -
1622816831.2764618-CDS-L-elsbetiae_contig7471:2759..28521622816831.2764618-CDS-L-elsbetiae_contig7471:2759..2852Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7471 2760..2852 -
1691683846.5130472-CDS-L-elsbetiae_contig7471:2759..28521691683846.5130472-CDS-L-elsbetiae_contig7471:2759..2852Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7471 2760..2852 -
1622816831.2882664-CDS-L-elsbetiae_contig7471:4136..42291622816831.2882664-CDS-L-elsbetiae_contig7471:4136..4229Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7471 4137..4229 -
1691683846.5214958-CDS-L-elsbetiae_contig7471:4136..42291691683846.5214958-CDS-L-elsbetiae_contig7471:4136..4229Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7471 4137..4229 -
1622816831.3036163-CDS-L-elsbetiae_contig7471:4271..47061622816831.3036163-CDS-L-elsbetiae_contig7471:4271..4706Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7471 4272..4706 -
1691683846.5307188-CDS-L-elsbetiae_contig7471:4271..47061691683846.5307188-CDS-L-elsbetiae_contig7471:4271..4706Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7471 4272..4706 -
1622816831.3156817-CDS-L-elsbetiae_contig7471:5616..60041622816831.3156817-CDS-L-elsbetiae_contig7471:5616..6004Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7471 5617..6004 -
1691683846.5409877-CDS-L-elsbetiae_contig7471:5616..60041691683846.5409877-CDS-L-elsbetiae_contig7471:5616..6004Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7471 5617..6004 -
1622816831.3262422-CDS-L-elsbetiae_contig7471:6987..73251622816831.3262422-CDS-L-elsbetiae_contig7471:6987..7325Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7471 6988..7325 -
1691683846.550978-CDS-L-elsbetiae_contig7471:6987..73251691683846.550978-CDS-L-elsbetiae_contig7471:6987..7325Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7471 6988..7325 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig7471.16360.1prot_L-elsbetiae_contig7471.16360.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig7471 144..7325 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig7471.16360.1

>prot_L-elsbetiae_contig7471.16360.1 ID=prot_L-elsbetiae_contig7471.16360.1|Name=mRNA_L-elsbetiae_contig7471.16360.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=516bp
EDLLGKKIRTQASQLAQLNETLQQEGSYSRLLERRLLQFDPEHPLPVTPQ
HLGRGGGLGQPKQQKSAAASTVCGRRKDREDGDDMRRGYAAAQERLKDAA
QLIRTLREALASRDEDANAAADRARMFQREASDLRRKLDTMAATTSTAFG
THARASKAAAAAPGRGEEKTVRFSMEAVGTGGERRGNDGGGCADQQQQQQ
QQQQRQQREELEREARRLRRELQEQREACAAAEAEGDELQATLRRISCSV
GGGCRCQGRAESASAAAGAAGVAEPVRELPPARPTTASGRPGVTGSRSCL
HRASSESGRVGSGDSGGGGGGGSGGGVGGGCGGGPQRARSSSGTRGGSSS
SNASICKASHGKSPSAEAGRGRGGGLRPATSACRRGGRDAAQGREKKGAG
EGGGELDDEREALLDYVEDLLDRIKGLEAACACLERERGESSRLAEGLQV
MREEVQQKKRQLAQAQAVLEKLRQAMEAGRAEKDEMGRLYNELLEQLRTA
EEEKEELRVGGDEGE*
back to top

mRNA from alignment at L-elsbetiae_contig7471:144..7325-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig7471.16360.1 ID=mRNA_L-elsbetiae_contig7471.16360.1|Name=mRNA_L-elsbetiae_contig7471.16360.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=7182bp|location=Sequence derived from alignment at L-elsbetiae_contig7471:144..7325- (Laminarionema elsbetiae ELsaHSoW15)
GAAGACCTGCTGGGCAAAAAGATACGGACCCAGGCGTCCCAGCTCGCGCA
GCTGAATGAAACGCTCCAACAGGAAGGCTCCTATTCTCGGCTGCTCGAGA
GGCGCTTGCTCCAGTTCGACCCTGAGCATCCTCTGCCGGTGACGCCGCAG
CACCTCGGTCGCGGTGGCGGGCTGGGTCAGCCGAAGCAGCAGAAATCGGC
GGCCGCGTCAACGGTTTGCGGGCGGAGGAAAGACCGTGAGGATGGCGACG
ACATGAGGCGAGGGTACGCCGCGGCCCAAGAACGCCTGAAGGACGCGGCC
CAGTTGATCAGGACACTCAGAGAGGCTTTGGCGAGCAGGTAAGGTCCCAC
CCGCTGTTCTGCACCGCGAAGGCGCGGATGGTCCTTTGTGCTTTCCAGCG
CGTTGTATGCTGGTTTGTCCCTGGGGAGAAGAACCGCCCCGTCTAGTTCA
AACGGGTGCATTGAGAGTTTTAGAGCCGGGCCTGGCTTGAAAGCTCGGAC
ACCAGCAGTATCTAACGTGACAAGCATCGGGAACGCGGATTATCCCCTGG
GGTCCTTTCGTCCAAGGAGCGAACAGGAAAACAATGAACAAAGAGCGACC
CTATCGCCCTCTCAATCTCTTTCCCTTCTCGCACAATGGTGTGCGCCGCG
AGCCGCGAGCCGCGAGAGACAAGATACAAAAGCCGCGGGGATATTTTTTA
CCCGCCGAAAAGATCTCCGTTTTGTGTGGCCACTTGACAGTCACGTACAT
GTAAGATAGTCTACTCCCTCTGACTCCCAAAATCTTAACCCCTTTCCCCC
CCCGGTGGGTAAACTAGCAACTAACCTCACACGAGCAAGTCGTGGTATAT
TTGCTGTTTCGCTACGCAACATAACGCAGCAGTAGGTTTGCGGCATTTTT
CGTAGTGTCCGATTGTCTAGATACAGCATTCCCGATTAAATCTGTGGGTC
CGCAGAGCCCACGTTGTTTCTCTCCGACACAACCAACTGTGTATGTGCGC
GGAAGAAGATCTTCCCATGTCGAAAATGTGTGTCGTTTTCGAAGAAAGCA
TGTGTTGTTTTCGAAGCATTTGTTTGGGACATTGGCCTCTAATCGCGTAC
AGAAGGGCTTGAAGTGATTTGATCTAGCGCTCAGGGGTATAGACTAAACA
TAAAATATCCTACTTCGTATAACCCTAACCCTAAAACTGGAGCGCCTCGA
ATGACGTCGAGAATCATTACCATTTGGTGGGTCTACGATGAATGGACATA
TTTTGACTTTGCTGCTGCTGCTGCTGCTGCTGCGTTTGGTTTCCTTGTCG
TGGACCCTCCACGCCAAAAAGGGACGAAGACGCAAACGCCGCAGCCGACC
GCGCGCGCATGTTCCAGCGAGAGGCCAGCGACCTTCGCCGCAAGCTCGAC
ACCATGGCCGCCACCACCTCCACCGCTTTCGGCACCCATGCCCGAGCAAG
CAAGGCCGCCGCCGCCGCGCCGGGCCGTGGCGAGGAGAAGACGGTGCGGT
TTTCCATGGAGGCGGTAGGCACCGGGGGCGAGCGCAGAGGCAACGACGGG
GGGGGCTGTGCCGACCAACAGCAGCAGCAGCAGCAGCAGCAGCAGCGGCA
GCAACGGGAGGAGTTGGAGAGGGAGGCCAGGCGGTTGAGGCGGGAGTTGC
AGGAGCAGCGGGAGGCGTGCGCGGCGGCGGAGGCCGAGGGGGACGAGCTC
CAGGCCACCGTGGAAGAGGCAAGCTGCGTAAATAGTAATAGTGGCATCTA
CCCTGCCTTGGGGGCGTGCCCGCACGCCGACTGTCCGTAGCCGGGGCCGC
ATGTCTCCCGGACGGTTAAGACATAACCCTCAGCTGACCGCGAGTGGAAT
TCGTTTGCCTTGTCGTGAGTGTTTTCTGCTGGAAACAACGAGTTATCTAT
ATATCTTTTGAATTGTTTCGTCAGACCTGCGTCTAGTTGCGGCTTGAGAA
ACGAACACGTATAGGAGCGCCGTTTGGGGCATCCGCCCTTTGAGCTTGTC
GCGGGAGGTTCATCCAGACTTTTGACCGGGGAGAGGGGGCGCATCAACGC
GTGTTTAGACTTGGATTAAGATTAAGAGCTTAGATGTCGAAGATGGCGAG
GGTATCGGAGAGTGTGCCCCCATACACCCCTCCCGTTTTCCCTGACACAG
TATAGAAACCAACCACACTAGCGGCACGTCGACATCATGACACATGTACT
CGCGAATTATTTGTTTCGCCCAGCAGGTTGGGGGGGGGGGGCTGAAGGCT
TACACTCGAGCAGAAGCTGCTCCAACCGCAAGAAAAACGCGCAGATGACA
ACGCACGCCGTGTGCGCAACCCGACACACTGTTTTAACGCCACGCCACCA
TCTCAGTTTGGTACCTGATGCCTCCCCGGCGTTCTTTATTTAACTCGCAA
GCCAAGCCCTCCCTACATTACAGGTCCTCGCGTTGCAGGCCCGGGTCTTC
GCGGCACGATAATGCACCCTTACAGGCCGCGTATCCGCCCCCCCCCCCTC
TCTCCCTCGTTCCGATAATCTCTTCTTTATGCCGCTAATCTCTCCCTCCC
TCCCCCCCTCCCTCCCACCCACCCCTCCGTCGCTGTGCCCCGAAAAACTA
ACCAAACCGAACACAACAGCTCCGGCGAATATCGTGCAGTGTCGGTGGCG
GTTGCCGCTGCCAGGGGAGGGCGGAAAGCGCAAGCGCGGCGGCGGGCGCG
GCGGGCGTGGCCGAGCCAGTGCGAGAGCTACCGCCCGCCCGGCCGACCAC
CGCGTCCGGTCGACCCGGGGTCACAGGCTCCCGGAGTTGCCTTCACCGGG
CATCATCGGAGTCAGGTCGGGTCGGCAGCGGTGACAGCGGCGGCGGCGGC
GGCGGCGGCAGTGGTGGTGGTGTTGGTGGCGGTTGCGGCGGCGGTCCTCA
AAGGGCGAGGAGCAGTAGCGGTACTCGCGGTGGCAGCAGCAGCAGCAACG
CAAGCATCTGCAAGGCCAGTCACGGAAAGTCTCCTTCGGCTGAAGCAGGA
AGAGGACGAGGAGGAGGGCTGAGACCGGCGACTTCTGCGTGCAGGCGTGG
CGGGGTAGGGGGGGGGAGGACTGAGAGCGAGGACGGAGGGGGGAAGAGGG
ACGCTGCCCAGGGCAGGGAAAAGAAGGGGGCCGGGGAAGGGGGCGGCGAG
CTTGACGACGAGAGAGAAGCTCTCCTTGACTATGTGGAGGTGAAGTCCGC
CGGATGTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGCTGTTG
TTGTCGGTGATGGTGTTGTTGCTGATGCTCTAACCCTAGCGGTTGTACAG
CGCTGCGTCCTGTTGCGTGCTGTGCTTTTCGAGGGCTGTTGCTGGGGATG
ATATCGGTGAGGTTATGCGTGTGGGTGATACGTATGGTATGTTTTGCCCT
TTGATTGTAGTAACAGTTGTTCTCCGAGACTGGTTCCGCTTCCGGTCTCT
CCGCCTCGTTGCACCAAGCAGCAGGTTCTCGCGGTTAAGGTGAATAGACA
CACCTTCGTAGATAAGTCGAATAGAAAACCCTTCAGGTCGCCGGCGTTTC
AACTTGCACGACAGCAGCCATGGACCGGCGATGGCCCCGCCTACATTTTG
TTGAGACGTGGAGCAAAAAAGGGTGTGTGAGCCCCCCGAGAAGGCCTAGC
CTGCTGCAACCATAATCCCCAGTGGCGGCACCTAGAGCAGGTGCTTTTTT
GAAGCACGCTTTGTTGTGCTCGTGCACAAATACACGGTGAAGAAAACAAA
ACTAAAACAACTTGCGGTTAGCACGTATTATGTACTCGCTGTATGAAAAG
CAGAACATATCTGGGCGGTTGGCGGCAGCAACATCATCCACACTTAAAAC
ATTCCCGATTGGAATCCTCACGAGACAAATACAAATACTTGTTGGCCAGC
TTCGCAGATCTTTGCAGGGGAAATGTTGAACTCTTCTGATATTTTACATA
GGTTTGTTTTTTCTGCTTCTTTCGCCAAATAGACTATTACGTCATTGCCT
GGAATACCGATTGAAACCCATATCGAGTCCTTGGTCTAGTGTGGGTAGGT
TCCATCTATGATTCATTGATTATTTTTTTAGAAGCAAACGCCCAACTGCT
GCTGTGCCTATAGTCTAGTCAGAGGTGAACACAGAAATACGTCACCATAT
GAAGTAAAACGTGTTCTAGGCTCATAACCGAGAAAAGCACGCCAAGGCTG
GCTACGTAGTACCTTGCTTTCATTTTGGGGAAAGCATGTAGACCACCAGC
CCGGGGAAAATTGCGGCCACTAACTTGTGTCTTTTACGTTTTTGGGGGGG
AGAGGGGAGGGGTGGAGGCGGACACGGTGTACTTACACACGCGGTGTCGC
GAGTGGACCGTCTCTTGAGAACTCGTGCTGCTTGATTCCAGGGTAGAACG
AACCCCCTCGCCCTTGTTTAACTGTAAACCGGCCAGCGCTATTCTCATTG
CTGCGCGCGTTTTTCTGCTGCAGGACCTTCTGGATCGGATCAAAGGCCTC
GAGGCGGCCTGTGCGTGTCTCGAACGAGAGCGCGGGGAGAGCTCAAGGCT
AGCAGAAGGGCTCCAGGTGCGTTGTTGTTGTTGGTGTTGGTGTTGTTGGT
GTTGTTGCTGTTGTTGTTGGTGTTGTTCGTGTTGTTGTTGGTGTTGTTGT
TGTTGTTGGTGTTGTTGGTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTG
TGCTTTCGGCGTCCTTTTATGGCCAAAGGACCTCCAGGTATAGCACCGGA
CGGCTCACCAAGGAACCCACTCGCCAGGCCCGGACTGACGAGTGAAGCCT
GTAAGCCGAGCTTTTCTGTGTTTGGCAGTGGTCGACATGGCGCGACACTC
GCCGCTGGCTGAGGGCCGAACAACTAACTATCTCTGAACACTCCCCTAGG
CCTCCAGTCATTTATGGAGGATAGTCTGTGCGGCCACGGTTCAGTACTTT
GGCAAGACGCCCTCGTGGCAAGGATCCCGTCGAGCACTGGGAATAAATGT
GAAAAAACAAAACAAAATAGGGGGGGGGGGGGGGGCTGCATCCGGCATGG
CACCTTAGCTGGTAGGTGGGTGCGCAACCACCCTTATCAGGCTGGCAGGG
CGGGCCAATTCGCGAGCTATCAGTCTGCCTTGGTATTTATGCCTGTTCTT
ATGGCGCACACGCCTCCGTTATCGTGCAATTTGCTGTGGTGGTTTCTTTA
CTGGCAGAAAGACAAGGACGATCTGAAGAACAACCTCGAGGGTGCCGGCG
TCGCCGCGGAGGTGATGCGGGAGGAGGTCCAACAGAAGAAGCGACAACTC
GCGCAGGTGATCGTTGGTGTACGGCCATGTGTGTTCGTGCCTAGAAATTG
AGGTATTTGATATATACCGCGTCGACCGCCATCAGTTCGGGTGACGGGGT
TGAAGAAAAACTTGAGACTTTGTGGTCAGCCATCGACTTTTCTCGGCCGA
GGCTCCATGCGGAGAAACCTGTCTGTGCCACTCAGCGACAATGTTGTATG
TATCCTACCACTAGCTTTTGTAACTGCACGTGAGTCTGATCTCTCGATCA
AACGGTTGGGGAAATATGTACTGCGAATGGCCAGTCGTTGTTTCTTCACA
TTAAAAACCGTTCCGATCTCTCCACCCGGTACCTTCCTATGTCCGTACAA
TCCAACACTTGATGCGGTCAATTCCCGTGGTCACAGGATAACTTATACCT
AAAAAAAAAGGTATACGAAAATAAAAATGGACCCGAAGGGTCAGCACGCG
ATAAAAATCAAAGACAAATATTGTGGAGCCCCTCGCTCCCCTCTACACGC
TATGCGAGGTAAAAAACAAAACTGGACAAGCCAACATCACCAACCAGGGG
TATACACTCCCTGGTTCTATCTTGGTACCCTGACATTGCCAGGGTGTTCC
GTGCCGGGTTCTCGCCGGTCAGGCCCAAACATCTATAGTCCTCCCCACCG
AATTTACCGTCCACATGACATGAAACAAGACCAGGGCGAAAACAAAAAAC
AAAAAAAACACATTCATAATTCCTCCGGTGGTGTTGCAAGATGGTACAGC
CGTGTGTGTGTGTGTGTGGGGGGGGATTAGCCAATAGTTGATTCAATCCG
CAACATATCGCGCTGCTGCGTCCGCCTCCGCCCTCCTGCGCACGTCGCGT
GCAGTTTCGATTGTTTCCGGCCTCTCTCCCCTGTTAGTTGTTGTCGTGTT
TTTTCTGTTGTTGGGTCCTTTGTTGTCTCGGTCGATCGCCCGTTGTCGGC
TAGCCTTCTCCTCCTTCTTGTGCCACGAGGCCATAAACCTCTCAGCTCCC
CGCAGCATCCCCGTATGCCACGGTACTCCATAGTCTAGATTAACGAAGTG
CGCATCATTGCCTGGCTTCTGAGACTCGGAAATACGAAAAGCCGAGGTAC
ATTTTAGAGAGAGAATCGAATCAACCCGCAAGTTCCAAGTTCCACCAGTT
CCTCTCCCCGAGCTCTTCTGTACAAAAATTTAACATTTGTGTTACAAGTG
CAGCACACGCATGATGCTCTTACAATATTTTCGTCAGTACATACATACAA
TATGTCTTTTGGATCTGTCTCAATGCCAGAATGGATCCGTCTCGACGAAA
CGAGGGCAGTGCATGATTTGAGAGATATCGTTAAATCGGACCAAGTGTAG
TCGTGACAGACTATGTACAACAAAACGGTACATATGCAGGTCGCACCGTC
TGCTTTTCTTGGAGTTCGGAGTGTTGCATGTTAACATGTACCACGTCATA
GTGACTGTTCTACAGGCACAACGCGGAGTGCAGCTGGCGCGTTAAAGACC
GCGCGGCCAACCAACCCGAGTCAGCTACCAAAAGGCGGCACTAAGTCTGT
AGTCCACCCCCAACCTCATCTGTTCTAAAACCCGAACCCGACCCCAACCC
CCAACGAAATCGACTCCTCAAGCAAGTCTTCCCACTGCGGTTGTTCGTCA
GCCACACGCCCCGGAAGCCAACGTGTCTTTTTCGTCTTGAAAACGGCCGC
CGACTTACTGCATGTATGCACAATAGGCGCAGGCGGTGCTAGAGAAACTG
CGACAGGCGATGGAGGCAGGTCGCGCAGAGAAGGACGAGATGGGCCGCTT
ATACAACGAGCTCCTCGAACAGCTGAGGACGGCGGAGGAGGAAAAGGAAG
AGCTTCGGGTAGGTGGAGACGAGGGAGAATGA
back to top

Coding sequence (CDS) from alignment at L-elsbetiae_contig7471:144..7325-

>mRNA_L-elsbetiae_contig7471.16360.1 ID=mRNA_L-elsbetiae_contig7471.16360.1|Name=mRNA_L-elsbetiae_contig7471.16360.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=3096bp|location=Sequence derived from alignment at L-elsbetiae_contig7471:144..7325- (Laminarionema elsbetiae ELsaHSoW15)
GAAGACCTGCTGGGCAAAAAGATACGGACCCAGGCGTCCCAGCTCGCGCA
GCTGAATGAAACGCTCCAACAGGAAGGCTCCTATTCTCGGCTGCTCGAGA
GGCGCTTGCTCCAGTTCGACCCTGAGCATCCTCTGCCGGTGACGCCGCAG
CACCTCGGTCGCGGTGGCGGGCTGGGTCAGCCGAAGCAGCAGAAATCGGC
GGCCGCGTCAACGGTTTGCGGGCGGAGGAAAGACCGTGAGGATGGCGACG
ACATGAGGCGAGGGTACGCCGCGGCCCAAGAACGCCTGAAGGACGCGGCC
CAGTTGATCAGGACACTCAGAGAGGCTTTGGCGAGCAGGAAGACCTGCTG
GGCAAAAAGATACGGACCCAGGCGTCCCAGCTCGCGCAGCTGAATGAAAC
GCTCCAACAGGAAGGCTCCTATTCTCGGCTGCTCGAGAGGCGCTTGCTCC
AGTTCGACCCTGAGCATCCTCTGCCGGTGACGCCGCAGCACCTCGGTCGC
GGTGGCGGGCTGGGTCAGCCGAAGCAGCAGAAATCGGCGGCCGCGTCAAC
GGTTTGCGGGCGGAGGAAAGACCGTGAGGATGGCGACGACATGAGGCGAG
GGTACGCCGCGGCCCAAGAACGCCTGAAGGACGCGGCCCAGTTGATCAGG
ACACTCAGAGAGGCTTTGGCGAGCAGGGACGAAGACGCAAACGCCGCAGC
CGACCGCGCGCGCATGTTCCAGCGAGAGGCCAGCGACCTTCGCCGCAAGC
TCGACACCATGGCCGCCACCACCTCCACCGCTTTCGGCACCCATGCCCGA
GCAAGCAAGGCCGCCGCCGCCGCGCCGGGCCGTGGCGAGGAGAAGACGGT
GCGGTTTTCCATGGAGGCGGTAGGCACCGGGGGCGAGCGCAGAGGCAACG
ACGGGGGGGGCTGTGCCGACCAACAGCAGCAGCAGCAGCAGCAGCAGCAG
CGGCAGCAACGGGAGGAGTTGGAGAGGGAGGCCAGGCGGTTGAGGCGGGA
GTTGCAGGAGCAGCGGGAGGCGTGCGCGGCGGCGGAGGCCGAGGGGGACG
AGCTCCAGGCCACCGGACGAAGACGCAAACGCCGCAGCCGACCGCGCGCG
CATGTTCCAGCGAGAGGCCAGCGACCTTCGCCGCAAGCTCGACACCATGG
CCGCCACCACCTCCACCGCTTTCGGCACCCATGCCCGAGCAAGCAAGGCC
GCCGCCGCCGCGCCGGGCCGTGGCGAGGAGAAGACGGTGCGGTTTTCCAT
GGAGGCGGTAGGCACCGGGGGCGAGCGCAGAGGCAACGACGGGGGGGGCT
GTGCCGACCAACAGCAGCAGCAGCAGCAGCAGCAGCAGCGGCAGCAACGG
GAGGAGTTGGAGAGGGAGGCCAGGCGGTTGAGGCGGGAGTTGCAGGAGCA
GCGGGAGGCGTGCGCGGCGGCGGAGGCCGAGGGGGACGAGCTCCAGGCCA
CCCTCCGGCGAATATCGTGCAGTGTCGGTGGCGGTTGCCGCTGCCAGGGG
AGGGCGGAAAGCGCAAGCGCGGCGGCGGGCGCGGCGGGCGTGGCCGAGCC
AGTGCGAGAGCTACCGCCCGCCCGGCCGACCACCGCGTCCGGTCGACCCG
GGGTCACAGGCTCCCGGAGTTGCCTTCACCGGGCATCATCGGAGTCAGGT
CGGGTCGGCAGCGGTGACAGCGGCGGCGGCGGCGGCGGCGGCAGTGGTGG
TGGTGTTGGTGGCGGTTGCGGCGGCGGTCCTCAAAGGGCGAGGAGCAGTA
GCGGTACTCGCGGTGGCAGCAGCAGCAGCAACGCAAGCATCTGCAAGGCC
AGTCACGGAAAGTCTCCTTCGGCTGAAGCAGGAAGAGGACGAGGAGGAGG
GCTGAGACCGGCGACTTCTGCGTGCAGGCGTGGCGGGCTCCGGCGAATAT
CGTGCAGTGTCGGTGGCGGTTGCCGCTGCCAGGGGAGGGCGGAAAGCGCA
AGCGCGGCGGCGGGCGCGGCGGGCGTGGCCGAGCCAGTGCGAGAGCTACC
GCCCGCCCGGCCGACCACCGCGTCCGGTCGACCCGGGGTCACAGGCTCCC
GGAGTTGCCTTCACCGGGCATCATCGGAGTCAGGTCGGGTCGGCAGCGGT
GACAGCGGCGGCGGCGGCGGCGGCGGCAGTGGTGGTGGTGTTGGTGGCGG
TTGCGGCGGCGGTCCTCAAAGGGCGAGGAGCAGTAGCGGTACTCGCGGTG
GCAGCAGCAGCAGCAACGCAAGCATCTGCAAGGCCAGTCACGGAAAGTCT
CCTTCGGCTGAAGCAGGAAGAGGACGAGGAGGAGGGCTGAGACCGGCGAC
TTCTGCGTGCAGGCGTGGCGGGAGGGACGCTGCCCAGGGCAGGGAAAAGA
AGGGGGCCGGGGAAGGGGGCGGCGAGCTTGACGACGAGAGAGAAGCTCTC
CTTGACTATGTGGAGAGGGACGCTGCCCAGGGCAGGGAAAAGAAGGGGGC
CGGGGAAGGGGGCGGCGAGCTTGACGACGAGAGAGAAGCTCTCCTTGACT
ATGTGGAGGACCTTCTGGATCGGATCAAAGGCCTCGAGGCGGCCTGTGCG
TGTCTCGAACGAGAGCGCGGGGAGAGCTCAAGGCTAGCAGAAGGGCTCCA
GGACCTTCTGGATCGGATCAAAGGCCTCGAGGCGGCCTGTGCGTGTCTCG
AACGAGAGCGCGGGGAGAGCTCAAGGCTAGCAGAAGGGCTCCAGGTGATG
CGGGAGGAGGTCCAACAGAAGAAGCGACAACTCGCGCAGGTGATGCGGGA
GGAGGTCCAACAGAAGAAGCGACAACTCGCGCAGGCGCAGGCGGTGCTAG
AGAAACTGCGACAGGCGATGGAGGCAGGTCGCGCAGAGAAGGACGAGATG
GGCCGCTTATACAACGAGCTCCTCGAACAGCTGAGGACGGCGGAGGAGGA
AAAGGAAGAGCTTCGGGTAGGTGGAGACGAGGGAGAATGAGCGCAGGCGG
TGCTAGAGAAACTGCGACAGGCGATGGAGGCAGGTCGCGCAGAGAAGGAC
GAGATGGGCCGCTTATACAACGAGCTCCTCGAACAGCTGAGGACGGCGGA
GGAGGAAAAGGAAGAGCTTCGGGTAGGTGGAGACGAGGGAGAATGA
back to top