prot_L-elsbetiae_contig7458.16344.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig7458.16344.1
Unique Nameprot_L-elsbetiae_contig7458.16344.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length374
Homology
BLAST of mRNA_L-elsbetiae_contig7458.16344.1 vs. uniprot
Match: D7G7A8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7A8_ECTSI)

HSP 1 Score: 252 bits (644), Expect = 1.890e-79
Identity = 127/192 (66.15%), Postives = 146/192 (76.04%), Query Frame = 0
Query:  149 MFGATTMHIGEAGRGAPRSIILQGGTVATKEGHMRLPGQFYQGLHFGLSAWNEWGEKLDDKENGRRNKELREALKELNPQPSAIHPTTFEGAVEGFTVEFSAGTLGRQAKRSVRHRSDPVWSEAERAVLQLARRFQQ--ALKWQPKVWGPGHEDDEDLHTSVLQEVLPARTGLRKLASTVVVYRVAKPAPAP 338
            M GATT+ IG+ GRG+ R +ILQG TVA KEGH+RLP QF+QG+HFG+SAW+ WGEKL D EN +RN  LR+ L+  +PQP+ I+PT FEG VEGFTV F AG+L RQ  RSVR RSDP W+EAE +VL  AR FQQ    KW PKVWGPGHE DE+LHTSVLQEVLP RTGLR L S VVVYRV    P P
Sbjct:    1 MRGATTITIGDGGRGSHRQVILQGATVAPKEGHLRLPDQFFQGVHFGVSAWDVWGEKLMDAENRKRNGALRQVLEGQDPQPTFIYPTMFEGGVEGFTVAFLAGSLSRQEMRSVRERSDPAWAEAETSVLTAARHFQQLTVTKWHPKVWGPGHERDENLHTSVLQEVLPTRTGLRALTSAVVVYRVETAVPLP 192          
BLAST of mRNA_L-elsbetiae_contig7458.16344.1 vs. uniprot
Match: A0A7S2SW41_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SW41_9STRA)

HSP 1 Score: 92.0 bits (227), Expect = 3.530e-17
Identity = 69/219 (31.51%), Postives = 109/219 (49.77%), Query Frame = 0
Query:  133 RRIPSTDEQAFLHDSWMFGATTMHIGEAGRGAPRSIILQGGTVATKE-----GHMRLPGQFYQGLHFGLSAWNEWGEKLDDKENGRRNKELREALKELNPQPSAIHPTTFEG-----AVEGFTVEFSAGTLGRQAKRSVRHRSDPV-WSEAERAVLQLARRFQQAL--KWQPKVWGPGHEDDEDLHTSVLQEVLPARTGLRKLASTVVVYRVAKPAPAP 338
            R +PST+E   L  S     +++       G   S  +  GT+          HM+LP ++Y+ +H G+S ++        ++  +++ EL +AL  L P+P+A+ P   E       +EG+ V F    L  Q    +R   D   W++A +AV  +ARR+ Q L  +W    WG   +D  D H+SVLQE++P R+GL+ L S+ V YRV    P P
Sbjct:  124 RTLPSTEEMEDLKYSLSHSVSSI-------GVSMSENVTLGTLVKPHPMHGHSHMKLPDEWYKCVHIGVSTYDMVSPNNTREDQRQQSSELYDALISLTPEPTAVLPWVCETNTTYWTIEGWAVRFCYDHL--QDLGFLRPGVDKARWAKASKAVESVARRYDQLLIMQWYSYEWGHPPDDSSDPHSSVLQEIVPIRSGLQPLRSSAVAYRVNAELPPP 333          
BLAST of mRNA_L-elsbetiae_contig7458.16344.1 vs. uniprot
Match: A0A7S2CPZ2_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2CPZ2_9STRA)

HSP 1 Score: 77.8 bits (190), Expect = 5.130e-12
Identity = 71/289 (24.57%), Postives = 120/289 (41.52%), Query Frame = 0
Query:   96 YVLLFTIVGAAFSFLVVVHLSSHESGTGAEDTPRLPARRIPSTDEQAFLHDSWMFGATTMHIGEAGRGAPRSIILQGGTVATKEGHMRLPGQFYQGLHFGLSA---------------WN---------------EWGEKLDDKENGRR------NKELREALKELNP-QPSAI-------HPTTFEGAVEGFTVEFSAGTLGRQAKRSVRHRSDPVWSEAERAVLQLARRFQQ--ALKWQPKVWGPGHEDDEDLHTSVLQEVLPARTGLRKLASTVVVYRVAKPAPAP 338
            + + + +VG    + +     + E G    +      RRIP+  EQ  +  + ++  + + +     G   ++ +   +        RLP  +Y  +H G+SA               W+               EW E+  +    R+      + E+ E L +L P +PSA+       + T++   V+G+ V F    L  Q +          +  A   V  +ARRF Q   L W P  WG G   DE LHT+VLQE++P R+G++ + S  VV+R+  P P P
Sbjct:  149 FSIFYALVGNPLDYHMKQRKPNLEGGFHDREEFAKKERRIPAEHEQMAMKRALLYSHSVVGVSADEEGTNVTLGMFARSDFEDVAQARLPEVWYHCMHVGVSALDFFDPDLASLSVSDWDDDEFYSTLHESPDDREWHEERGEAWKARKLEVDQNSVEMLEQLWDLRPARPSAVLNWDIASNVTSWPWRVQGWVVRFCPEDLAAQGELGSGPTPKSRFEHAAEGVAVVARRFGQNIVLHWYPHQWGKGALHDEHLHTNVLQEIVPTRSGMQAVRSHGVVWRIGGPVPKP 437          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig7458.16344.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7G7A8_ECTSI1.890e-7966.15Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S2SW41_9STRA3.530e-1731.51Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S2CPZ2_9STRA5.130e-1224.57Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..92
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 114..373
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 93..113
NoneNo IPR availableTMHMMTMhelixcoord: 93..115

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig7458contigL-elsbetiae_contig7458:2247..6748 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig7458.16344.1mRNA_L-elsbetiae_contig7458.16344.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig7458 2247..6748 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig7458.16344.1 ID=prot_L-elsbetiae_contig7458.16344.1|Name=mRNA_L-elsbetiae_contig7458.16344.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=374bp
MVVDTTHPGEGHPVQRRVSYRRLNEEEHTEGGGVGDNLSVHQTRGGILSK
SGLVLGMNAGDSRGGGDDMDAYIAGADNPASIWHEIWLAVRDGIWYVLLF
TIVGAAFSFLVVVHLSSHESGTGAEDTPRLPARRIPSTDEQAFLHDSWMF
GATTMHIGEAGRGAPRSIILQGGTVATKEGHMRLPGQFYQGLHFGLSAWN
EWGEKLDDKENGRRNKELREALKELNPQPSAIHPTTFEGAVEGFTVEFSA
GTLGRQAKRSVRHRSDPVWSEAERAVLQLARRFQQALKWQPKVWGPGHED
DEDLHTSVLQEVLPARTGLRKLASTVVVYRVAKPAPAPLTPSPPKKMTTP
SAATTRKTAAKMDPRPLRPSDEP*
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