prot_L-elsbetiae_contig7452.16340.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig7452.16340.1
Unique Nameprot_L-elsbetiae_contig7452.16340.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length329
Homology
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BLAST of mRNA_L-elsbetiae_contig7452.16340.1 vs. uniprot
Match: D8LQE4_ECTSI (WW domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LQE4_ECTSI)

HSP 1 Score: 363 bits (931), Expect = 2.790e-113
Identity = 217/315 (68.89%), Postives = 235/315 (74.60%), Query Frame = 0 
Query:   14 AASAGAPTGGFLRGLEMGLSLGAAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTRRAGAVLSDAVEGLVSAFGLKPTARAAVEGAAA-AEQAHSAAGGDHTRRPPASLLRHPTAMGILLEALFHPAHRSPSEDLRAGCCALLSFASCVEVPTLDS---GGXXXXXXXXXXXKETVDLVELAQTSHALMQAAGECFETSQLASLQARLRLFAEHPIVSLGVLKWIHAQVSTEAFVSTPSFLSYAPVFLKLCGQAADEHPPQRPETFEILKLMVKARTAPDTPPAAKTKLKQHVLLRMAELVVRG 324
            AASAGAPTGGFLRG+EM LSL           XXXXXXXXXX                        RRAG VL DAV+GLVSAFGLKP  R AV GAAA A +  +A      RRPPA L+RHPT M ILLEALFHPAHR PSEDLRAGCCA+L++ASCVEVP LD+   G             E +DLVELA+TSHAL+QAAGECFETSQLASLQ RLR FAEHP+VSLGVLKW+HAQ STE+FVSTPSFLSYAPVFLKLCGQAADEHPPQRPE FEILKLM+ ARTAPDTPPAAK KLKQH+LLRMAELVV+G
Sbjct:  709 AASAGAPTGGFLRGVEMALSL-----ELPRPSXXXXXXXXXXAEKSARAAADAVVSLLGQAGGGGARRAG-VLLDAVDGLVSAFGLKPAVRVAVIGAAAVAVELQAAESEQPKRRPPAYLVRHPTLMDILLEALFHPAHRCPSEDLRAGCCAILAYASCVEVPPLDTNNDGSSSNGGSLGGEAIEVIDLVELAETSHALLQAAGECFETSQLASLQGRLRPFAEHPLVSLGVLKWVHAQASTESFVSTPSFLSYAPVFLKLCGQAADEHPPQRPEAFEILKLMLNARTAPDTPPAAKAKLKQHILLRMAELVVKG 1017
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig7452.16340.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LQE4_ECTSI2.790e-11368.89WW domain-containing protein n=2 Tax=Ectocarpus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006942TH1 proteinPFAMPF04858TH1coord: 123..324
e-value: 2.1E-15
score: 56.4
IPR006942TH1 proteinPANTHERPTHR12144TH1 PROTEIN-RELATEDcoord: 126..324

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig7452contigL-elsbetiae_contig7452:1188..8933 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig7452.16340.1mRNA_L-elsbetiae_contig7452.16340.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig7452 1188..8933 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig7452.16340.1 ID=prot_L-elsbetiae_contig7452.16340.1|Name=mRNA_L-elsbetiae_contig7452.16340.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=329bp
GLAGGGGTEEDRAAASAGAPTGGFLRGLEMGLSLGAAPPPPLRGSGVVAA
AAAAAAESAARAASEAVVSLLGQAGGGGTRRAGAVLSDAVEGLVSAFGLK
PTARAAVEGAAAAEQAHSAAGGDHTRRPPASLLRHPTAMGILLEALFHPA
HRSPSEDLRAGCCALLSFASCVEVPTLDSGGGGGGGGAGGGGKETVDLVE
LAQTSHALMQAAGECFETSQLASLQARLRLFAEHPIVSLGVLKWIHAQVS
TEAFVSTPSFLSYAPVFLKLCGQAADEHPPQRPETFEILKLMVKARTAPD
TPPAAKTKLKQHVLLRMAELVVRGGRSA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006942TH1