prot_L-elsbetiae_contig7429.16316.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig7429.16316.1
Unique Nameprot_L-elsbetiae_contig7429.16316.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length249
Homology
BLAST of mRNA_L-elsbetiae_contig7429.16316.1 vs. uniprot
Match: A0A6H5L0T1_9PHAE (PAP-associated domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0T1_9PHAE)

HSP 1 Score: 425 bits (1092), Expect = 1.840e-149
Identity = 221/245 (90.20%), Postives = 224/245 (91.43%), Query Frame = 0
Query:    7 LVDVSFEGQGHNGQAANQLVKDLVDGFPALRPLALLLKQFMMEKGLCVSYTGGLSSYALTLMVARYLQEQTSQMDSGSLLLGFLDFYGNHFDPRLTGISVGRSRYFSRSAPLPPVPAPPQ--VAPVPGAPSAARLFYGQRGRPPSFQGGLGGAAPPGAPPVA-GIPGWGDMMRMPYRFDPLFIEDPMNLSNNVGRNCFRVYQIQRAWSDAHASLTRALDDESQLRSSPYRLLRCIISDPEPAPDS 248
            +VDVSFEGQGHNGQAANQLVKDLVDGFPALRPLALLLKQFMMEKGL VSYTGGLSSYALTLMVARYLQEQTSQMDSGSLLLGFLDFYGNHFDPRLTGISVGRSRYFSRSAPLP   APP    A VPGAPSAAR+FYGQ        GGLGG APPGAPPVA GIPGWGDMMRMPYRFDPLFIEDPMNLSNNVG NCFRVYQIQRAWSDAHASL RALDDESQLR+SPYRLLRCIISDPEPAPDS
Sbjct:    1 MVDVSFEGQGHNGQAANQLVKDLVDGFPALRPLALLLKQFMMEKGLSVSYTGGLSSYALTLMVARYLQEQTSQMDSGSLLLGFLDFYGNHFDPRLTGISVGRSRYFSRSAPLP---APPTQVAAAVPGAPSAARMFYGQ--------GGLGGVAPPGAPPVAAGIPGWGDMMRMPYRFDPLFIEDPMNLSNNVGHNCFRVYQIQRAWSDAHASLARALDDESQLRASPYRLLRCIISDPEPAPDS 234          
BLAST of mRNA_L-elsbetiae_contig7429.16316.1 vs. uniprot
Match: A0A835ZHQ3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZHQ3_9STRA)

HSP 1 Score: 245 bits (626), Expect = 4.420e-76
Identity = 135/221 (61.09%), Postives = 159/221 (71.95%), Query Frame = 0
Query:    3 LPRVLVDVSFEGQGHNGQAANQLVKDLVDGFPALRPLALLLKQFMMEKGLCVSYTGGLSSYALTLMVARYLQEQTSQMDSGSLLLGFLDFYGNHFDPRLTGISVGRSRYFSRSAPLPPVPAPPQVAPVPGAPS-AARLFYGQRGRPPSFQGGLGGAAPPGAPPVAGIPGWGDMMRMPYRFDPLFIEDPMNLSNNVGRNCFRVYQIQRAWSDAHASLTRALD 222
             P V VDVSFEGQ HNGQA+N+LV  L++ +PALRPLA++LKQF+ E+GLC SYTGGLSSYAL L+VARYLQEQ++ +D+GSLL GFLDF+GN FDPR TGISV R  YFSR A  P    PP  APV  +P    ++FY      PS  G   GA         G  G      +PYRFDPLFIEDP+ L NNVGRNCFR+YQI+RAWSDAHA+LTRA+D
Sbjct:  126 FPPVHVDVSFEGQWHNGQASNRLVLGLIEEYPALRPLAIVLKQFLKERGLCESYTGGLSSYALVLLVARYLQEQSTHLDAGSLLRGFLDFFGNTFDPRTTGISVTRRCYFSRLAQTPTT-WPPLAAPVQPSPGMGGQVFYPPPPPLPSHPGPHMGAGAAAGGFTGGREG------VPYRFDPLFIEDPLALGNNVGRNCFRIYQIKRAWSDAHAALTRAMD 339          
BLAST of mRNA_L-elsbetiae_contig7429.16316.1 vs. uniprot
Match: D7FHG7_ECTSI (LNR domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHG7_ECTSI)

HSP 1 Score: 239 bits (609), Expect = 1.620e-68
Identity = 123/133 (92.48%), Postives = 125/133 (93.98%), Query Frame = 0
Query:   11 SFEGQGHNGQAANQLVKDLVDGFPALRPLALLLKQFMMEKGLCVSYTGGLSSYALTLMVARYLQEQTSQMDSGSLLLGFLDFYGNHFDPRLTGISVGRSRYFSRSAPLPPVPAPPQVAPVPGAPSAARLFYGQ 143
            +FEGQGHNGQAANQLVKDLVDGFPALRPLALLLKQFMMEKGL VSYTGGLSSYALTLMVARYLQEQTSQMDSGSLLLGFLDFYGNHFDPRLTGISVGRSRYFSRSAPLP  P P   A VPGAPSAAR+FYGQ
Sbjct: 1792 TFEGQGHNGQAANQLVKDLVDGFPALRPLALLLKQFMMEKGLSVSYTGGLSSYALTLMVARYLQEQTSQMDSGSLLLGFLDFYGNHFDPRLTGISVGRSRYFSRSAPLP-APPPQVAAAVPGAPSAARMFYGQ 1923          
BLAST of mRNA_L-elsbetiae_contig7429.16316.1 vs. uniprot
Match: W7U5Q9_9STRA (Nucleotidyl transferase domain protein n=4 Tax=Monodopsidaceae TaxID=425072 RepID=W7U5Q9_9STRA)

HSP 1 Score: 185 bits (469), Expect = 8.990e-50
Identity = 109/221 (49.32%), Postives = 136/221 (61.54%), Query Frame = 0
Query:    6 VLVDVSFEGQGHNGQAANQLVKDLVDGFPALRPLALLLKQFMMEKGLCVSYTGGLSSYALTLMVARYLQEQTSQMDSGSLLLGFLDFYGNHFDPRLTGISVGRSRYFSRSAPLPPVPAPPQVAPVPGAPSAARLFYGQRGRPP---SFQGGLGGAAPPGAP------PVAGIPGWGDMMRMPYRFDPLFIEDPMNLSNNVGRNCFRVYQIQRAWSDAHASL 217
            V +DVS EG  HNG  AN+++  L+    ALRPL L+LKQFM E+GL  SY+GGLSSY L LMVARYLQEQ++ MD+G+LLLGFLDFY NHFDPR  GIS  +  YFSRS+         Q + +             +  PP   + +  LGGA     P           P  G  +  PY+FDPL+IEDP+  SNN+GRNCFR++QIQRAW+DA   L
Sbjct: 1145 VHLDVSIEGGQHNGLLANRVIAKLLGENFALRPLVLVLKQFMKERGLMESYSGGLSSYGLVLMVARYLQEQSNAMDTGALLLGFLDFYSNHFDPRSMGISTNQRCYFSRSS---------QQSHL----XXXXXXXXXQNMPPLGSNRRVSLGGAGDVHLPYYYVHQQQQVRPAGGSFLENPYKFDPLYIEDPIRPSNNIGRNCFRIFQIQRAWNDAWRDL 1352          
BLAST of mRNA_L-elsbetiae_contig7429.16316.1 vs. uniprot
Match: A0A1Z5KCZ8_FISSO (Uncharacterized protein n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KCZ8_FISSO)

HSP 1 Score: 177 bits (450), Expect = 3.190e-47
Identity = 113/265 (42.64%), Postives = 149/265 (56.23%), Query Frame = 0
Query:    8 VDVSFEGQGHNGQAANQLVKDLVDGFPALRPLALLLKQFMMEKGLCVSYTGGLSSYALTLMVARYLQEQTSQMDSGSLLLGFLDFYGNHFDPRLTGISVGRSRYFSRSAPLPPVPAPPQVAP-------------VPGAPSAARLFYGQRGRPPSFQGGLGGAAPPGAP--PVAGIPGWG-----------DMMRMPYRFDPLFIEDPMNLSNNVGRNCFRVYQIQRAWSDAHASLTRAL--DDESQLR---SSPYRLLRCIISD 241
            +D++F+  GH+G  A Q+V  ++D  P +RPL L+LKQF+  +GL  +YTGGLS+Y L LMVARYLQEQ S  D GSLL+GFLDFYGN+FDPR  GISV   +YFSR +    + A PQ  P             VP      R  +  +G   + +G         A   PVA    +            D   MPY  DPL IEDP+N SNNVGRN FR++ + RA+SDAH +L  +L  D  S +     S Y LL+C++ +
Sbjct: 1233 LDITFDSPGHHGIEAIQMVTQIMDELPVIRPLLLILKQFLSNRGLLTAYTGGLSAYGLFLMVARYLQEQESWGDCGSLLMGFLDFYGNNFDPRSIGISVKNRQYFSRLSAA--MGAAPQSVPTNETAWRPIGPNHVPTTQFFRRYSFSDKGNIDAHRGANPSVIVQSATSIPVATNNNYFRKPLTQHNNEIDHSAMPYTLDPLLIEDPLNESNNVGRNAFRIFSVLRAFSDAHRALLASLEWDLHSNVEFQDDSEYPLLKCLLQN 1495          
BLAST of mRNA_L-elsbetiae_contig7429.16316.1 vs. uniprot
Match: A0A7S3JPY7_9STRA (Hypothetical protein n=2 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JPY7_9STRA)

HSP 1 Score: 176 bits (445), Expect = 1.460e-46
Identity = 102/222 (45.95%), Postives = 128/222 (57.66%), Query Frame = 0
Query:    6 VLVDVSFEGQGHNGQAANQLVKDLVDGFPALRPLALLLKQFMMEKGLCVSYTGGLSSYALTLMVARYLQEQTSQ-MDSGSLLLGFLDFYGNHFDPRLTGISVGRSRYFSRSAPLPPVPAPPQVAPVPGAPSAARLFYGQRGRPPSFQGGLGGAAPPGAPPVAGIPGWGDMMRMPYRFDPLFIEDPMNLSNNVGRNCFRVYQIQRAWSDAHASLTRALDDESQ 226
            V +DVSFE   H G  AN+LV  ++D  PA RPL L+LKQ  + +GLC SYTGGLSSYALTL+VARYL EQ S+  D G+LLLGFLDFY + FDPR TGISVGR  +F+R+                   +A R     RG                                 + FDPL++EDP++  NNVGRNCFR+ QIQRAWS+A  +LT A+  +S+
Sbjct: 1090 VKLDVSFEAPWHRGLDANRLVLKMLDDTPAARPLLLVLKQHTVNRGLCASYTGGLSSYALTLLVARYLHEQPSRPTDPGALLLGFLDFYAHRFDPRKTGISVGRRCFFARAE----------------LGTAPRHAVNHRGS--------------------------------FHFDPLYVEDPLSPGNNVGRNCFRIAQIQRAWSEAFFALTEAIRRQSR 1263          
BLAST of mRNA_L-elsbetiae_contig7429.16316.1 vs. uniprot
Match: A0A1Z5KF72_FISSO (Uncharacterized protein n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KF72_FISSO)

HSP 1 Score: 176 bits (445), Expect = 1.490e-46
Identity = 111/263 (42.21%), Postives = 146/263 (55.51%), Query Frame = 0
Query:    8 VDVSFEGQGHNGQAANQLVKDLVDGFPALRPLALLLKQFMMEKGLCVSYTGGLSSYALTLMVARYLQEQTSQMDSGSLLLGFLDFYGNHFDPRLTGISVGRSRYFSR-SAPLPPVPAPPQVAPVPGAPSAA----------RLFYGQRGRPPSFQGGLGGAAPPGAPPVAGIPGWG-------------DMMRMPYRFDPLFIEDPMNLSNNVGRNCFRVYQIQRAWSDAHASLTRAL--DDESQLR---SSPYRLLRCIISD 241
            +D++F+  GH+G  A Q+V  ++D  P +RPL L+LKQF+  +GL  +YTGGLS+Y L LMVARYLQEQ S  D GSLL+GFLDFYGN+FDPR TGISV   +YFSR SA + P P           P  A          R  +  +G   + +G         A P+                    D   MPY  DPL IEDP+N SNNVGRN FR++ + RA+SDAH +L  +L  D  S +     S Y LL+ ++ +
Sbjct: 1232 LDITFDSPGHHGIEAIQMVTQIMDELPVMRPLLLILKQFLSNRGLLTAYTGGLSAYGLFLMVARYLQEQESWGDCGSLLMGFLDFYGNNFDPRSTGISVKNRQYFSRLSAVMGPAPQSVPTNETAWRPIGANHLPTTQFFRRYSFSDKGNIDAHRGANPSVIVQSATPIPVTAKNNHHRKPPTQPNNEIDHSAMPYTLDPLLIEDPLNESNNVGRNAFRIFSVLRAFSDAHRALLASLEWDLHSNVEFQDDSEYPLLKFLLQN 1494          
BLAST of mRNA_L-elsbetiae_contig7429.16316.1 vs. uniprot
Match: A0A1E7FBX4_9STRA (Uncharacterized protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FBX4_9STRA)

HSP 1 Score: 169 bits (429), Expect = 2.090e-44
Identity = 117/282 (41.49%), Postives = 155/282 (54.96%), Query Frame = 0
Query:    6 VLVDVSFEGQGHNGQAANQLVKDLVDGFPALRPLALLLKQFMMEKGLCVSYTGGLSSYALTLMVARYLQEQTSQMDSGSLLLGFLDFYGNHFDPRLTGISVGRSRYFSRSAPLPPVPA---PPQV--------------APVPGAP---------SAARLFYGQRGRPPS-FQGGLGGAAPPGA------------PPVAGIPGWG------DMMRMPYRFDPLFIEDPMNLSNNVGRNCFRVYQIQRAWSDAHASLTRALD-DESQLRSSPYRLLRCIISD 241
            + +D+SF+G  H+G  ANQ+V  +++  P +RPL L+LKQF++ +GL  +YTGGLSS+ L LMVARYLQEQ    D GSLL+GFLDFYGN FDPR  GISV   +YF+R+     V A   PP +               P+P            S A    G R R P  F    G     G+            P V   P         D +R P+ FD LF+EDP++ SNNVGRN FR+ Q+QRA+SDAH +L  +L+  ES   +  Y LL+CI+ +
Sbjct: 1337 IQLDISFDGPEHHGLEANQMVTLILEELPLIRPLMLVLKQFLLRRGLLTAYTGGLSSHCLFLMVARYLQEQPLSGDCGSLLMGFLDFYGNCFDPRAIGISVRGRQYFARTNNHTAVVAGYEPPAIWNGPHPHTQHAVTNIPIPTGDIDFRRRNSFSDAGSVDGSRRRHPRLFAKPTGSTVASGSSHRFVPRSAPTHPKVVDHPNNNNTNPSFDNVR-PFTFDLLFVEDPLSSSNNVGRNAFRINQVQRAFSDAHRALVASLEWGESAEGAGKYPLLKCILGE 1617          
BLAST of mRNA_L-elsbetiae_contig7429.16316.1 vs. uniprot
Match: A0A7S2Q1J0_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2Q1J0_9STRA)

HSP 1 Score: 169 bits (428), Expect = 2.820e-44
Identity = 104/250 (41.60%), Postives = 142/250 (56.80%), Query Frame = 0
Query:    6 VLVDVSFEGQGHNGQAANQLVKDLVDGFPALRPLALLLKQFMMEKGLCVSYTGGLSSYALTLMVARYLQEQTSQM-DSGSLLLGFLDFYGNHFDPRLTGISVGRSRYFSRSAPLPPVPA--------PPQVAPVPGAPSAARLFYGQRGRPPSFQGGLGGAAPPGAPPVAGIPGWGDMMRMPYRFDPLFIEDPMNLSNNVGRNCFRVYQIQRAWSDAHASLTRALDDESQLRSS-----PYRLLRCIISD 241
            V +D+SF+ + H+G  A  +++ L++  P +RPL L+LKQF++++GL  +YTGGLSSY L LMVARY QEQ+    D GSLL+G LDFYGN F+PR TGISV   RYFSR        A        PP+  P+               R  SFQ              A  P        P +FDP+++EDP+N  NNVGRN FR++Q+QRA+SDAH +L  AL+ +    S       Y LL+C++ +
Sbjct: 1271 VQLDLSFDAKEHHGLEALDMIRHLLEEIPMIRPLVLVLKQFLLDRGLLTAYTGGLSSYCLFLMVARYCQEQSPTWNDRGSLLMGLLDFYGNFFEPRTTGISVRTRRYFSRFGENQHQEARRNNAATKPPRFQPL--------------NRQSSFQ-------------TAQQPN----QLQPGKFDPIWVEDPLNPGNNVGRNAFRIFQVQRAFSDAHRALVAALEWDINSMSEFGEDGEYPLLKCLLQN 1489          
BLAST of mRNA_L-elsbetiae_contig7429.16316.1 vs. uniprot
Match: A0A7S1U3N8_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U3N8_9STRA)

HSP 1 Score: 160 bits (404), Expect = 3.430e-43
Identity = 106/251 (42.23%), Postives = 129/251 (51.39%), Query Frame = 0
Query:    6 VLVDVSFEGQGHNGQAANQLVKDLVDGFPALRPLALLLKQFMMEKGLCVSYTGGLSSYALTLMVARYLQEQTSQM--DSGSLLLGFLDFYGNHFDPRLTGISVGRSRYFSRSAPLPPVPAPPQVAPVPGAPSAARLFYGQRGRPPSFQGGLGGAAPPGAPPVAGIPGWGDMMRMPYRFDPLFIEDPMNLSNNVGRNCFRVYQIQRAWSDAHASLTRALD-DESQLRSSPYR--------LLRCIIS-DPEP 244
            V +DVSFE Q H G  AN  +  L+   P LRPL L+LKQF  EKGL  SYTGG+SSYALTL+VARYLQE       D GSLLLGFLDFYG+ FDPR TG+SV R  YFSR      + A PQ        S + L                                         +DP+ IEDP++ +NNVGRNCFR++Q+ +AW     +L   LD D   L    +R        +L CI+  DP P
Sbjct:  207 VRLDVSFESQQHYGVRANGFILHLLAALPPLRPLTLILKQFCKEKGLSASYTGGISSYALTLLVARYLQETLGHSGGDLGSLLLGFLDFYGSKFDPRTTGVSVRRGVYFSR------LHANPQ--------SVSHLNV---------------------------------------YDPIIIEDPLSEANNVGRNCFRIHQVLKAWRAGAKALNARLDQDADDLGGGDHRVGPLENMSILSCIVKGDPFP 404          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig7429.16316.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L0T1_9PHAE1.840e-14990.20PAP-associated domain-containing protein n=1 Tax=E... [more]
A0A835ZHQ3_9STRA4.420e-7661.09Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
D7FHG7_ECTSI1.620e-6892.48LNR domain-containing protein n=1 Tax=Ectocarpus s... [more]
W7U5Q9_9STRA8.990e-5049.32Nucleotidyl transferase domain protein n=4 Tax=Mon... [more]
A0A1Z5KCZ8_FISSO3.190e-4742.64Uncharacterized protein n=1 Tax=Fistulifera solari... [more]
A0A7S3JPY7_9STRA1.460e-4645.95Hypothetical protein n=2 Tax=Aureoumbra lagunensis... [more]
A0A1Z5KF72_FISSO1.490e-4642.21Uncharacterized protein n=1 Tax=Fistulifera solari... [more]
A0A1E7FBX4_9STRA2.090e-4441.49Uncharacterized protein n=1 Tax=Fragilariopsis cyl... [more]
A0A7S2Q1J0_9STRA2.820e-4441.60Hypothetical protein n=1 Tax=Skeletonema marinoi T... [more]
A0A7S1U3N8_9STRA3.430e-4342.23Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002058PAP/25A-associatedPFAMPF03828PAP_assoccoord: 83..115
e-value: 9.1E-7
score: 29.0
NoneNo IPR availablePANTHERPTHR23092POLY(A) RNA POLYMERASEcoord: 6..240
NoneNo IPR availableSUPERFAMILY81631PAP/OAS1 substrate-binding domaincoord: 34..224

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig7429contigL-elsbetiae_contig7429:3777..8431 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig7429.16316.1mRNA_L-elsbetiae_contig7429.16316.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig7429 3757..8961 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig7429.16316.1 ID=prot_L-elsbetiae_contig7429.16316.1|Name=mRNA_L-elsbetiae_contig7429.16316.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=249bp
MGLPRVLVDVSFEGQGHNGQAANQLVKDLVDGFPALRPLALLLKQFMMEK
GLCVSYTGGLSSYALTLMVARYLQEQTSQMDSGSLLLGFLDFYGNHFDPR
LTGISVGRSRYFSRSAPLPPVPAPPQVAPVPGAPSAARLFYGQRGRPPSF
QGGLGGAAPPGAPPVAGIPGWGDMMRMPYRFDPLFIEDPMNLSNNVGRNC
FRVYQIQRAWSDAHASLTRALDDESQLRSSPYRLLRCIISDPEPAPDS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002058PAP_assoc