prot_L-elsbetiae_contig7423.16306.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig7423.16306.1
Unique Nameprot_L-elsbetiae_contig7423.16306.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length190
Homology
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BLAST of mRNA_L-elsbetiae_contig7423.16306.1 vs. uniprot
Match: D8LTA9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTA9_ECTSI)

HSP 1 Score: 275 bits (703), Expect = 1.760e-91
Identity = 133/190 (70.00%), Postives = 159/190 (83.68%), Query Frame = 0 
Query:    1 VCEFLRQLFPEGTRRGGAELKCMRRAVSLLDTRWKAEIDRKRKATFSSEDKGMVDAVLMGGVYLPSDTFANVVDYLDHGTAIRSTPCSRSWWRTISGLPAASYVDMNLGKKGSWSDVVTQLKYTRASNPLRSVSRLSLGPKVKLGSFAKLAQAAGGPLALTHLDLTRSKGARKIDFTALAKALPNLEGLA 190
            VC FL QLFP   RR G EL+CMRR +SLLD+RWKA++DRKRKATF+SEDKGMVDAVLMGG YLPSD+FA VV+YLDHGTA+RSTP S+SWWRTISGLP AS++D N+GK+  W ++VTQLK  +ASNPLR+V+R++LG + KLGSF  L +  GG + LTHLDLTRS GA+K+DF ALAKALP L GLA
Sbjct:    3 VCAFLGQLFPRSARRNGGELRCMRRGLSLLDSRWKADVDRKRKATFASEDKGMVDAVLMGGFYLPSDSFAMVVEYLDHGTAVRSTPSSKSWWRTISGLPPASHIDTNIGKRLPWGELVTQLKTIKASNPLRAVARVTLGCRTKLGSFHNLGKVVGG-VGLTHLDLTRSWGAKKLDFAALAKALPTLRGLA 191
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig7423.16306.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LTA9_ECTSI1.760e-9170.00Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig7423contigL-elsbetiae_contig7423:4674..6182 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig7423.16306.1mRNA_L-elsbetiae_contig7423.16306.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig7423 4674..6182 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig7423.16306.1 ID=prot_L-elsbetiae_contig7423.16306.1|Name=mRNA_L-elsbetiae_contig7423.16306.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=190bp
VCEFLRQLFPEGTRRGGAELKCMRRAVSLLDTRWKAEIDRKRKATFSSED
KGMVDAVLMGGVYLPSDTFANVVDYLDHGTAIRSTPCSRSWWRTISGLPA
ASYVDMNLGKKGSWSDVVTQLKYTRASNPLRSVSRLSLGPKVKLGSFAKL
AQAAGGPLALTHLDLTRSKGARKIDFTALAKALPNLEGLA
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