prot_L-elsbetiae_contig742.16301.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig742.16301.1
Unique Nameprot_L-elsbetiae_contig742.16301.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length789
Homology
BLAST of mRNA_L-elsbetiae_contig742.16301.1 vs. uniprot
Match: A0A6H5LIY1_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LIY1_9PHAE)

HSP 1 Score: 135 bits (340), Expect = 5.970e-29
Identity = 303/832 (36.42%), Postives = 361/832 (43.39%), Query Frame = 0
Query:    1 KQGSTKAQDIRTFVDLATGRAG-RVTAAKVGPSPNGS-CGRGAGFNSSRII-FPCST--PPGPHGTPVR---------PTGGLLGYPASR------HNDPSPSGSAGAPGITA--SPIAKAVAKEQVA----GLTTRSDATATATPAAAHASPADGKSXXXXXXXXXXXXXXXXXXXXP------HREISSLRPGAVSASSRTRRPPFNPYRVAARKASPRNGDSTRRQRGRHRRRAKN---EGMAARRGRGRAHGEQQQGGCSTLASSXXXXXXXXXXXXPSSD------------ACGRTYAAEWIWPAASARNWSPRVAARRHHRTGGLGAEDAATATATAGDPPSASRTXXXXXXXXXXSRRRVGFGAQPLGR-DATGVGGGDAGGGWTDSPRHYSEGSDDPS------SRPPANG--------DAXXXXXXXXXXXXXAQRGPARTGVEAVEAGVALGSCAVALREAFRPNGRGGWVRP----PPRPPAMDDPTTGRAPLSAFGLPSARAGGERENGVNVE-EDICNLARLLTP-----CEQALAGRTAAXXXXXXXXXXXXXXXXXXXXXXXXXAGRVAPVGRWLRMVRRLFSG-RGDAPPPQPPSSPP-----------VRTQEENDSIFLNPFSPNSSRRFSTCSVDGGA-GDGYWSGYSGYESGGGA-AAASRLSKEISRPMADFNFEERVIGCIFGEEDGATARDDEAARGGKAGWEDRGESRVQELEGG-GEKETSPFSFP----PPPSPRACLVPDSARPLPAAVDIGI------DGCGGDGESTPAPATCTAPSGVEGTLTTKSAVPLPVADPGSVRSS 735
            ++ + K  DIRT VDLATGRAG RV+AAKVGPSP+GS C  G+   SSR    PCST  P GPH TPVR         P       P SR       +   P G A    +      +AKA A+E V     G  T ++A A A  A   A P  GKS         XXXXXXXXXXX       H E    R G+  A S +R    NPYRVA +  S R  D+ +RQR            +GM    G G   G   +G        XXXXXXXXXXXXPS+             A G  Y  +WIWPA   +   PR+  R        G +D   A  T                              P+G+      GGG+ GGG     R   +G+D          R PA G        +A     XXXXXXXX    PA T            +C V L  AF P+G GGW+      PP  PA   P T  +  S F       GG RE  V  + ED+ +LA L  P       Q        XXXXXXXXXXXXXXXXX           VA    W R+ R  F G + D   P PPS+             + TQE+  S FLNPFSP S RRFS    D GA  DGY SG   +  GGG  AA +R S E    MA  N EERV+GCIFG  D      DEA    + G E  G  R ++ +G   E E  P  F     PPPS    L+PD+A  LPA V+  +      DGC  DG S P     T  +G+      +S+  L    PG+ RSS
Sbjct:  185 RESAGKVPDIRTIVDLATGRAGLRVSAAKVGPSPSGSACSGGSSTLSSRDDKHPCSTTTPSGPHATPVRRPRLDKALPPXXXXXVSPLSRPPHRSLRDADGPCGHAPRASVATVVEMLAKADAEEAVKLSNDGAVTAAEAEAEAEEA--RAKPTGGKSTTSSIGRMRXXXXXXXXXXXXXXXXXYHYE-HQRRDGSDPALS-SRPVVVNPYRVAEKSGSSRAVDARQRQRXXXXXXXXXXXXDGMLEGAGGGCRSGANFRGRXXXXXXXXXXXXXXXXXXXPSTSCSXWAXXXPSAAASGSVYTVDWIWPAKGPQKQPPRLVCRYDD-----GTDDDVLACPT------------------------------PIGKMGRLPAGGGEGGGGA----RECDDGADLSRLRECRICRSPACGHAAWAAALEAAQASAXXXXXXXXXXGEPAGTTAGGGGTATTPSNCGVPLFGAFHPDGHGGWIGSLLPSPPVAPAGPPPATAPSCASNFD------GGGREQAVATDDEDLDDLAPLPPPLPVRSARQXXXXXXXXXXXXXXXXXXXXXXXXXAGDHHRAEVATVAQAEGWWRVFRSWFEGPQADGESPVPPSTAXXXXXXXXXXXTMMTQEDTISDFLNPFSPASYRRFSASLADAGAPSDGYGSGDGFFGGGGGRDAAGTRRSPE----MAKLNLEERVMGCIFGGSDSPDGYGDEAMMTWQRGREINGGGRQEDGKGEVRESEPPPACFTVRQHPPPS---RLLPDNAWRLPAGVEDALGSPAAPDGCTADGLSKPFGNAATRSAGMARVRAFRSSPAL--RPPGTPRSS 958          
BLAST of mRNA_L-elsbetiae_contig742.16301.1 vs. uniprot
Match: D8LMY4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMY4_ECTSI)

HSP 1 Score: 69.7 bits (169), Expect = 1.910e-8
Identity = 46/71 (64.79%), Postives = 50/71 (70.42%), Query Frame = 0
Query:    1 KQGSTKAQDIRTFVDLATGRAG-RVTAAKVGPSPNGS-CGRGAGFNSSR--IIFPCST--PPGPHGTPVRP 65
            KQ + K  DIRT VDLATGRAG RV+AAKVGPSP+GS C  G+   SSR     PCST  P GPH TPVRP
Sbjct:  114 KQSAGKVPDIRTIVDLATGRAGLRVSAAKVGPSPSGSACSGGSLSFSSRGGDKHPCSTTTPSGPHATPVRP 184          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig742.16301.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5LIY1_9PHAE5.970e-2936.42Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
D8LMY4_ECTSI1.910e-864.79Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig742contigL-elsbetiae_contig742:30281..32713 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig742.16301.1mRNA_L-elsbetiae_contig742.16301.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig742 30281..32713 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig742.16301.1 ID=prot_L-elsbetiae_contig742.16301.1|Name=mRNA_L-elsbetiae_contig742.16301.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=789bp
KQGSTKAQDIRTFVDLATGRAGRVTAAKVGPSPNGSCGRGAGFNSSRIIF
PCSTPPGPHGTPVRPTGGLLGYPASRHNDPSPSGSAGAPGITASPIAKAV
AKEQVAGLTTRSDATATATPAAAHASPADGKSGRTRKPTSPRCPQQQREQ
REPHREISSLRPGAVSASSRTRRPPFNPYRVAARKASPRNGDSTRRQRGR
HRRRAKNEGMAARRGRGRAHGEQQQGGCSTLASSPSPPSSSSSSSSPSSD
ACGRTYAAEWIWPAASARNWSPRVAARRHHRTGGLGAEDAATATATAGDP
PSASRTPPSPSTTPSSSRRRVGFGAQPLGRDATGVGGGDAGGGWTDSPRH
YSEGSDDPSSRPPANGDAPAAAAAAAAGGGGAQRGPARTGVEAVEAGVAL
GSCAVALREAFRPNGRGGWVRPPPRPPAMDDPTTGRAPLSAFGLPSARAG
GERENGVNVEEDICNLARLLTPCEQALAGRTAAAATAGTPPPSAKNSANH
TQAAAAAAAGRVAPVGRWLRMVRRLFSGRGDAPPPQPPSSPPVRTQEEND
SIFLNPFSPNSSRRFSTCSVDGGAGDGYWSGYSGYESGGGAAAASRLSKE
ISRPMADFNFEERVIGCIFGEEDGATARDDEAARGGKAGWEDRGESRVQE
LEGGGEKETSPFSFPPPPSPRACLVPDSARPLPAAVDIGIDGCGGDGEST
PAPATCTAPSGVEGTLTTKSAVPLPVADPGSVRSSSTCSTASSGSAVSIV
SANAATSAAASAAIAEQASLAAHVAAATAKQARDAFRFN
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