prot_L-elsbetiae_contig7402.16289.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig7402.16289.1
Unique Nameprot_L-elsbetiae_contig7402.16289.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length561
Homology
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BLAST of mRNA_L-elsbetiae_contig7402.16289.1 vs. uniprot
Match: D7FZR7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZR7_ECTSI)

HSP 1 Score: 774 bits (1998), Expect = 8.030e-278
Identity = 414/502 (82.47%), Postives = 444/502 (88.45%), Query Frame = 0 
Query:   64 MDFTFARFALNMAMASSRTEPEVMLKAGAPAFLVGMLSNPNELVTGPAVLALSQMAHHEACQRALGLAGGVPPLVLLCFTSQSPAVLTQACISLAQLSRYPPNRAIIAGKGGIAAMVRLLEGFRREDRVTVQVIEQALSALVNVMFRSDANRGLAEECGATPPTITIMDAAEEEGILVQACLTLANMAYGNQFAALRLLEAGADKAACDLIRDSDKTKHSNVMEAAFICLGNLANNALNQAHVGAGGSVDVALTVCKHCQSARVVRAAAQALCSLTLKNQANKTRCASLDAVATLLELAVAWGVAEDGEEGSSRQSRSAPSSIAVEXXXXXXXXXXXX-----SCVAILMQHPTNAHAMKKGGGLRQLAELVFDSEDGEVIIATAKAIVVLLPEPEELVRTFRNGQVSQAEEAGAHEALMRCQEWAFGRKAPPSWLVYGLDLLGGEIKALEARLKQEGASSLRKPEEFFVSTDFFEERETVIPPDVTVAEDEDLGGMLFHVF 560
            MDFTFARFALNMA+ASSRTEPEVMLKAGAPAFLVGML+NPNELVTGPAVLALSQMAHHEACQRALGLAGG+PPLVLLCFTSQSPAVL QACIS+AQLSRYPPNRAIIA KGG+AAMVRLLEGFRRED VT QVI QAL+ALVNV +RSDANRGL EECGAT PTITIMDA + E +LVQACL LANMAY NQFAALRLLEAGADKAACDLIRDSDKT+HS+V+EAAFICL NLANN LNQAHVGAG SV++AL+VCKHCQSARVVR+AA+ALCSLTLKNQANKTRCASLDAV+ LLELA AWGVAED                   XXXXXXXXXX       SCVAILMQHPTNA AMK+ GGL++LAEL+FDSE  EVI ATAKAIVVLLP+PEELVRTFRNGQVSQAEEAGA+EAL+RC+EWAFGR+APPSWL YGLDLLG EI+ LEARLKQEG    RKPEEFFV TDFFEERET IPPDVT+A+DEDLGGMLFHVF
Sbjct:    1 MDFTFARFALNMAIASSRTEPEVMLKAGAPAFLVGMLTNPNELVTGPAVLALSQMAHHEACQRALGLAGGIPPLVLLCFTSQSPAVLVQACISIAQLSRYPPNRAIIAAKGGVAAMVRLLEGFRREDHVTEQVIGQALTALVNVTYRSDANRGLVEECGATLPTITIMDALDNEVVLVQACLALANMAYLNQFAALRLLEAGADKAACDLIRDSDKTRHSDVIEAAFICLANLANNPLNQAHVGAGDSVELALSVCKHCQSARVVRSAARALCSLTLKNQANKTRCASLDAVSILLELAAAWGVAEDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTAAGQAASCVAILMQHPTNALAMKRAGGLKELAELIFDSEHSEVITATAKAIVVLLPDPEELVRTFRNGQVSQAEEAGAYEALVRCREWAFGRRAPPSWLAYGLDLLGAEIEGLEARLKQEGGGQFRKPEEFFVPTDFFEERETAIPPDVTLAQDEDLGGMLFHVF 502
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig7402.16289.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FZR7_ECTSI8.030e-27882.47Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000225ArmadilloSMARTSM00185arm_5coord: 80..120
e-value: 17.0
score: 11.4
coord: 211..252
e-value: 8.6
score: 13.7
coord: 121..162
e-value: 21.0
score: 10.8
coord: 163..209
e-value: 5.0
score: 15.5
coord: 410..451
e-value: 300.0
score: 1.8
coord: 254..298
e-value: 260.0
score: 2.3
IPR011989Armadillo-like helicalGENE3D1.25.10.10coord: 63..281
e-value: 1.1E-27
score: 98.6
IPR011989Armadillo-like helicalGENE3D1.25.10.10coord: 282..484
e-value: 7.6E-12
score: 47.0
NoneNo IPR availablePANTHERPTHR46241FAMILY NOT NAMEDcoord: 78..359
IPR016024Armadillo-type foldSUPERFAMILY48371ARM repeatcoord: 86..481

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig7402contigL-elsbetiae_contig7402:394..9419 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig7402.16289.1mRNA_L-elsbetiae_contig7402.16289.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig7402 220..9545 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig7402.16289.1 ID=prot_L-elsbetiae_contig7402.16289.1|Name=mRNA_L-elsbetiae_contig7402.16289.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=561bp
MDTQLLSLEGNMRQLCEATEEKGTRMIRQAKRTADSEREEKAILCQWLNG
FLVGASSEPQLSSMDFTFARFALNMAMASSRTEPEVMLKAGAPAFLVGML
SNPNELVTGPAVLALSQMAHHEACQRALGLAGGVPPLVLLCFTSQSPAVL
TQACISLAQLSRYPPNRAIIAGKGGIAAMVRLLEGFRREDRVTVQVIEQA
LSALVNVMFRSDANRGLAEECGATPPTITIMDAAEEEGILVQACLTLANM
AYGNQFAALRLLEAGADKAACDLIRDSDKTKHSNVMEAAFICLGNLANNA
LNQAHVGAGGSVDVALTVCKHCQSARVVRAAAQALCSLTLKNQANKTRCA
SLDAVATLLELAVAWGVAEDGEEGSSRQSRSAPSSIAVEEEEEAAAAAQA
ASCVAILMQHPTNAHAMKKGGGLRQLAELVFDSEDGEVIIATAKAIVVLL
PEPEELVRTFRNGQVSQAEEAGAHEALMRCQEWAFGRKAPPSWLVYGLDL
LGGEIKALEARLKQEGASSLRKPEEFFVSTDFFEERETVIPPDVTVAEDE
DLGGMLFHVF*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000225Armadillo
IPR011989ARM-like
IPR016024ARM-type_fold