mRNA_L-elsbetiae_contig7402.16289.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig7402.16289.1
Unique NamemRNA_L-elsbetiae_contig7402.16289.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
[Close]
BLAST of mRNA_L-elsbetiae_contig7402.16289.1 vs. uniprot
Match: D7FZR7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZR7_ECTSI)

HSP 1 Score: 773 bits (1997), Expect = 5.000e-276
Identity = 414/502 (82.47%), Postives = 444/502 (88.45%), Query Frame = 1 
Query:  316 MDFTFARFALNMAMASSRTEPEVMLKAGAPAFLVGMLSNPNELVTGPAVLALSQMAHHEACQRALGLAGGVPPLVLLCFTSQSPAVLTQACISLAQLSRYPPNRAIIAGKGGIAAMVRLLEGFRREDRVTVQVIEQALSALVNVMFRSDANRGLAEECGATPPTITIMDAAEEEGILVQACLTLANMAYGNQFAALRLLEAGADKAACDLIRDSDKTKHSNVMEAAFICLGNLANNALNQAHVGAGGSVDVALTVCKHCQSARVVRAAAQALCSLTLKNQANKTRCASLDAVATLLELAVAWGVAEDGEEGSSRQSRSAPSSIAVEXXXXXXXXXXXX-----SCVAILMQHPTNAHAMKKGGGLRQLAELVFDSEDGEVIIATAKAIVVLLPEPEELVRTFRNGQVSQAEEAGAHEALMRCQEWAFGRKAPPSWLVYGLDLLGGEIKALEARLKQEGASSLRKPEEFFVSTDFFEERETVIPPDVTVAEDEDLGGMLFHVF 1806
            MDFTFARFALNMA+ASSRTEPEVMLKAGAPAFLVGML+NPNELVTGPAVLALSQMAHHEACQRALGLAGG+PPLVLLCFTSQSPAVL QACIS+AQLSRYPPNRAIIA KGG+AAMVRLLEGFRRED VT QVI QAL+ALVNV +RSDANRGL EECGAT PTITIMDA + E +LVQACL LANMAY NQFAALRLLEAGADKAACDLIRDSDKT+HS+V+EAAFICL NLANN LNQAHVGAG SV++AL+VCKHCQSARVVR+AA+ALCSLTLKNQANKTRCASLDAV+ LLELA AWGVAED                   XXXXXXXXXX       SCVAILMQHPTNA AMK+ GGL++LAEL+FDSE  EVI ATAKAIVVLLP+PEELVRTFRNGQVSQAEEAGA+EAL+RC+EWAFGR+APPSWL YGLDLLG EI+ LEARLKQEG    RKPEEFFV TDFFEERET IPPDVT+A+DEDLGGMLFHVF
Sbjct:    1 MDFTFARFALNMAIASSRTEPEVMLKAGAPAFLVGMLTNPNELVTGPAVLALSQMAHHEACQRALGLAGGIPPLVLLCFTSQSPAVLVQACISIAQLSRYPPNRAIIAAKGGVAAMVRLLEGFRREDHVTEQVIGQALTALVNVTYRSDANRGLVEECGATLPTITIMDALDNEVVLVQACLALANMAYLNQFAALRLLEAGADKAACDLIRDSDKTRHSDVIEAAFICLANLANNPLNQAHVGAGDSVELALSVCKHCQSARVVRSAARALCSLTLKNQANKTRCASLDAVSILLELAAAWGVAEDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTAAGQAASCVAILMQHPTNALAMKRAGGLKELAELIFDSEHSEVITATAKAIVVLLPDPEELVRTFRNGQVSQAEEAGAYEALVRCREWAFGRRAPPSWLAYGLDLLGAEIEGLEARLKQEGGGQFRKPEEFFVPTDFFEERETAIPPDVTLAQDEDLGGMLFHVF 502
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig7402.16289.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FZR7_ECTSI5.000e-27682.47Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig7402contigL-elsbetiae_contig7402:220..9545 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score779.6
Seed ortholog evalue9.6e-223
Seed eggNOG ortholog2880.D7FZR7
Hectar predicted targeting categoryother localisation
EggNOG OGs28NP6@1,2QV8V@2759
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons12
Model size1983
Cds size1683
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig7402.16289.1prot_L-elsbetiae_contig7402.16289.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig7402 394..9419 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816825.5597997-UTR-L-elsbetiae_contig7402:219..3931622816825.5597997-UTR-L-elsbetiae_contig7402:219..393Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig7402 220..393 -
1691683842.3866997-UTR-L-elsbetiae_contig7402:219..3931691683842.3866997-UTR-L-elsbetiae_contig7402:219..393Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig7402 220..393 -
1622816825.7503428-UTR-L-elsbetiae_contig7402:9419..95451622816825.7503428-UTR-L-elsbetiae_contig7402:9419..9545Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig7402 9420..9545 -
1691683842.5535796-UTR-L-elsbetiae_contig7402:9419..95451691683842.5535796-UTR-L-elsbetiae_contig7402:9419..9545Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig7402 9420..9545 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816825.5747948-CDS-L-elsbetiae_contig7402:393..5571622816825.5747948-CDS-L-elsbetiae_contig7402:393..557Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7402 394..557 -
1691683842.399007-CDS-L-elsbetiae_contig7402:393..5571691683842.399007-CDS-L-elsbetiae_contig7402:393..557Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7402 394..557 -
1622816825.5859456-CDS-L-elsbetiae_contig7402:1019..12271622816825.5859456-CDS-L-elsbetiae_contig7402:1019..1227Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7402 1020..1227 -
1691683842.412217-CDS-L-elsbetiae_contig7402:1019..12271691683842.412217-CDS-L-elsbetiae_contig7402:1019..1227Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7402 1020..1227 -
1622816825.5965238-CDS-L-elsbetiae_contig7402:1610..18101622816825.5965238-CDS-L-elsbetiae_contig7402:1610..1810Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7402 1611..1810 -
1691683842.4209318-CDS-L-elsbetiae_contig7402:1610..18101691683842.4209318-CDS-L-elsbetiae_contig7402:1610..1810Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7402 1611..1810 -
1622816825.6080291-CDS-L-elsbetiae_contig7402:2447..25811622816825.6080291-CDS-L-elsbetiae_contig7402:2447..2581Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7402 2448..2581 -
1691683842.4297915-CDS-L-elsbetiae_contig7402:2447..25811691683842.4297915-CDS-L-elsbetiae_contig7402:2447..2581Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7402 2448..2581 -
1622816825.6466594-CDS-L-elsbetiae_contig7402:3122..32351622816825.6466594-CDS-L-elsbetiae_contig7402:3122..3235Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7402 3123..3235 -
1691683842.4389718-CDS-L-elsbetiae_contig7402:3122..32351691683842.4389718-CDS-L-elsbetiae_contig7402:3122..3235Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7402 3123..3235 -
1622816825.6670287-CDS-L-elsbetiae_contig7402:5408..55461622816825.6670287-CDS-L-elsbetiae_contig7402:5408..5546Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7402 5409..5546 -
1691683842.4563797-CDS-L-elsbetiae_contig7402:5408..55461691683842.4563797-CDS-L-elsbetiae_contig7402:5408..5546Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7402 5409..5546 -
1622816825.6794662-CDS-L-elsbetiae_contig7402:5785..59261622816825.6794662-CDS-L-elsbetiae_contig7402:5785..5926Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7402 5786..5926 -
1691683842.4669726-CDS-L-elsbetiae_contig7402:5785..59261691683842.4669726-CDS-L-elsbetiae_contig7402:5785..5926Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7402 5786..5926 -
1622816825.692553-CDS-L-elsbetiae_contig7402:6370..64991622816825.692553-CDS-L-elsbetiae_contig7402:6370..6499Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7402 6371..6499 -
1691683842.4764268-CDS-L-elsbetiae_contig7402:6370..64991691683842.4764268-CDS-L-elsbetiae_contig7402:6370..6499Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7402 6371..6499 -
1622816825.704293-CDS-L-elsbetiae_contig7402:6769..69071622816825.704293-CDS-L-elsbetiae_contig7402:6769..6907Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7402 6770..6907 -
1691683842.4948823-CDS-L-elsbetiae_contig7402:6769..69071691683842.4948823-CDS-L-elsbetiae_contig7402:6769..6907Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7402 6770..6907 -
1622816825.7168982-CDS-L-elsbetiae_contig7402:7142..73111622816825.7168982-CDS-L-elsbetiae_contig7402:7142..7311Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7402 7143..7311 -
1691683842.5172372-CDS-L-elsbetiae_contig7402:7142..73111691683842.5172372-CDS-L-elsbetiae_contig7402:7142..7311Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7402 7143..7311 -
1622816825.7281363-CDS-L-elsbetiae_contig7402:7859..79701622816825.7281363-CDS-L-elsbetiae_contig7402:7859..7970Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7402 7860..7970 -
1691683842.5295568-CDS-L-elsbetiae_contig7402:7859..79701691683842.5295568-CDS-L-elsbetiae_contig7402:7859..7970Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7402 7860..7970 -
1622816825.7394176-CDS-L-elsbetiae_contig7402:9381..94191622816825.7394176-CDS-L-elsbetiae_contig7402:9381..9419Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7402 9382..9419 -
1691683842.540484-CDS-L-elsbetiae_contig7402:9381..94191691683842.540484-CDS-L-elsbetiae_contig7402:9381..9419Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7402 9382..9419 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig7402.16289.1

>prot_L-elsbetiae_contig7402.16289.1 ID=prot_L-elsbetiae_contig7402.16289.1|Name=mRNA_L-elsbetiae_contig7402.16289.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=561bp
MDTQLLSLEGNMRQLCEATEEKGTRMIRQAKRTADSEREEKAILCQWLNG
FLVGASSEPQLSSMDFTFARFALNMAMASSRTEPEVMLKAGAPAFLVGML
SNPNELVTGPAVLALSQMAHHEACQRALGLAGGVPPLVLLCFTSQSPAVL
TQACISLAQLSRYPPNRAIIAGKGGIAAMVRLLEGFRREDRVTVQVIEQA
LSALVNVMFRSDANRGLAEECGATPPTITIMDAAEEEGILVQACLTLANM
AYGNQFAALRLLEAGADKAACDLIRDSDKTKHSNVMEAAFICLGNLANNA
LNQAHVGAGGSVDVALTVCKHCQSARVVRAAAQALCSLTLKNQANKTRCA
SLDAVATLLELAVAWGVAEDGEEGSSRQSRSAPSSIAVEEEEEAAAAAQA
ASCVAILMQHPTNAHAMKKGGGLRQLAELVFDSEDGEVIIATAKAIVVLL
PEPEELVRTFRNGQVSQAEEAGAHEALMRCQEWAFGRKAPPSWLVYGLDL
LGGEIKALEARLKQEGASSLRKPEEFFVSTDFFEERETVIPPDVTVAEDE
DLGGMLFHVF*
back to top

mRNA from alignment at L-elsbetiae_contig7402:220..9545-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig7402.16289.1 ID=mRNA_L-elsbetiae_contig7402.16289.1|Name=mRNA_L-elsbetiae_contig7402.16289.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=9326bp|location=Sequence derived from alignment at L-elsbetiae_contig7402:220..9545- (Laminarionema elsbetiae ELsaHSoW15)
CAGCATTTCGCTGGAGACAAGACGAGTCATCGGGAGGTCCTAGGGTTCTG
CGCTCAAGAGGTGGACAAGGCCTTGAGCGTGCTGGTGCAGCGCGTCAAGA
AGAAGCTGCTGGGCACTATCGATAAGATGGACACGCAGCTTCTCTCGCTT
GAAGGGAACATGCGGTAAGTGTGGGAGTTGCTGAAGGGTTCGGGTGCACA
TGGGACACGCTTGTAGATGTTTTTTTTTGTTTTTTTCAACAACAACAACA
TGCCCTCAATAGCGGCAAGCCCAATGCGCGGACCTAGAACTCTGTGCGAA
TCCTAATTATTACGCTTAGCGTAGATGTGCATGCCGCCGCGGCGTCGGGG
GCTGGCGTGTAGCGCCCAGAGTTAAGCGATGTTCCGGCGAGCGCTGACAC
CGCCCCGGGGCAAGCCTGCCTCGCTGCCGCCAGGAAGTAAGGCGGTGGAC
GACTGGGCGGGGGTTGAAGGAGTAAAGCTTTGTCTGATGACGCAGAGGAG
ATTGTCGTAGAGAAGGTAAATTATACTTGACGTTGACGAATCTGACGACG
AGCTAGAGCCAGCAAAGATTATGAGCGCGTGGGGGTAGTGGGGAAGGGAC
CGTCGTTGTTCGCGAAACCCACTCTACGCTTTGTAGCTCTCTAGAAGACA
TCGCTCAGTCTTGTCGTACAAATACCGTATTTCTGAAGCCGGGCATTTTT
TCCGCAAGGCAAGGATGGGAGCAGCACGTGCCATTAAACCGGCACGGCAG
CCGAATTTCAGAACGTTTCCTCGATCATAGCGGAACCAGTCGACAGGCAC
CTTGAGGTGCAAAAGTATTGGGACGGCAGTGATGTGCGGGGGGGGTGTTC
GACGTTCATATGCTTCGGTGCTTCAACTGTTTTCGCGCTCACTGCTGTCC
ATCAATATGTTTTGGTCTTCTTGTGTTGAACCCAAACCTTACATGGCCGC
CGGTTGCCGCCGGATAAAATCATTTGTGGGACGTTAGGCTGTGCGGTACT
GCCGTACGGGCATTTTTTAACAAGACCGCCTGCACACTAAGGTCTCGTTG
TCGAGTGGATGAGCAGGTAGTATTAGACGACGTGCAGAGATTATGTCGTT
GTTATGCGGAAAAGCAACTGCTGTGTATCGTTTTGAAATGACAAACACGA
AGAATCAAGGCCGTGCTGCGACCCGTGCAACACACAATTCCTTATCTATA
GAAAATGTACAACGCATACAGGTAGATCCTAGGGTATCGCTGTCACTGCC
AAACTTACTATTGTGTCTTGTGCACATCAAAAGCCTTTCCTCCTCAATAG
CAGCAATAGTGTTGCTATTCCGAATAGCAGCACTGCCCGATACAGCGACA
TATTGTTCGTTTGCCCCTACATGCCGCTATATATGGGGCCTTCATCTACT
GTATGTAGACTTGTTGAGCAGCTATGCGGCCGTATGCAAGTCGACCGCCG
TACACGTAGATGAACGTTGCCATGTAGAAACACCTGCCTCGGTCGGGCAT
CGTCCTATTCTACGTGCATCCCTCACAGCCCACTTACATTCCGATGACCC
CTTGCACGTGATAACGGCCACGCAGACAACTGTGCGAAGCAACTGAGGAG
AAAGGCACTCGAATGATACGGCAGGCAAAGCGAACGGCGGATTCGGAGAG
AGAGGAGAAGGCCATTTTGTGCCAGTGGCTTAATGGGTATGTGGTGTGGT
ATCAACCACTCTTTGTCGACATCGATACCAGTAGCGGTATACAGGGGGGC
GCCTTCACGCGACGGCGGGCCCTTCCTCACCAGTGAACCATCGCCGCGCG
TTGAATATTGAACGAATCGTACCATATAGAGCTCGCAATGAGCGCAAGGA
ACCTGTGTGCCTTGATGGCACGCTACTGGCGGACCAGGACGGCGAGTGCT
TTCGCCCAGTTTTGGTGTGCGAATATTGTACGTAGCCGCTGCATGAGAGG
CAAGCGTCAGTCTCCCACATCCAAGGTGTCGGTGTCTCGGCTCCCCGACC
ATACGCGACGCGGCCGCAAGATGAAGTCTGGGGAGCTTGGTCACATCTCT
CAAGAACTGGCACGCTCCTCCTCCATCTCCTGGGGTCTACTGCCCCTGTG
TACTCGCTGCCGTTCCACGCCTGTACCCCCTTCTCCACCCCCCGCGCTCC
CCGCCGCGGGTTCGCTGCCTCCTGTGTTTCCCACACTGACGCCGAGGCAA
ATGGCATATTTTCTACCGATATTTGTCCGTCTAGATTTCTGGTTGGCGCG
TCTAGCGAGCCTCAGCTGTCCTCGATGGACTTCACATTTGCGAGATTTGC
TCTCAACATGGCCATGGCCTCGAGCAGGACAGAACCTGAGGTGATGCTGA
AGGCCGGGGCTCCGGCGTTCTTGGTTGGGATGCTGTCCAACCCCAACGAG
CTGGTGAGATGGAAATGATGTCCAGCCCAAGAAAATAAGGAAAGACCCAC
GGGAGGCGGTGAGGGTTGTGGGCGGTGACGCCGTCTGCGGCAAAATAATG
TGCCCGCCTCTTGTAACTCAATCTAAGCGGGCCCGCTGTCAACACGGATC
GCCGAAAATCGCCGGACCCTCAAAGAAGCAACGACAATTCCGCTTGGCCC
TGCTGTCTCTGTTGCTTGCTGGGGCACACGCACTCAAGGTGACTGGACCG
GCAGTTCTTGCCCTGTCGCAAATGGCACACCACGAGGCTTGTCAGCGTGC
CCTCGGCCTTGCCGGGGGCGTCCCGCCCCTGGTACTCTTGTGCTTCACAA
GCCAGTCCCCTGCGGTCCTTACGCAGGTCAGTCGGGCTAAATCAAGCAAA
CTGGAACTCGAGCCTAGGGGGGGGGGGTTGTTCAGTTTTGGGAGATATAC
GAGGCTCAGGGAGGGGCTGCATTGTTGTCTCGGGGTGAACAGGGGGTCTT
TGGGATGAGAGCGCGCTAGTAATATCTGCACAGCAGTGCCAAGCAGGCAT
CGTACGCCACGTAACCATGCCCCCTTTACCCCCACCGACGCATTTCGTCA
ACATATTTTAACCGATTCCTTCTCCTCCCTCCCCAACGAACATCAGGCGT
GCATCTCCCTAGCCCAGTTGAGCCGATACCCGCCGAACAGGGCGATCATA
GCCGGCAAGGGCGGCATCGCGGCTATGGTACGCCTCCTTGAAGGGTTCAG
AAGAGAAGATCGCGTCACCGTGCAGGTGCCCCGTTTGTGTTGGTGTTGAT
GTTGGTGTTGTCCTTGCCCCTGTTGTGTTTGGTGCAAGCGGTTATAGACC
CTTCTGTTTCAAGCATCTCTCCTCTTTCCAGTCCGAAGCCGTGCGCTTCT
CGTGCAGGAGGAGCAAAGGCCTGTCGCTACAGACACGTGTGTTTCCAAAT
GCATTGTGAAGGGTCCAAATCAAGCCTCGACTTTTGGCTTCGGCACTGGC
TCTGCTCGCAGAAGAGATCGACCTGCAGCTTTGAATGCGGCGAAGAGCTA
TGCGCAGAAAGTTATCACCTCGAGCTCGAACATCTCGTCGAGAGTGGTCA
ACTCAAGGCAGGAGGGCCCCGGTGCCGTCGGCAATTCTGCCTGTTTCCTC
ACTAAGGCGAAGCCGTCAAATGAGAAGCATCACAACCACCACCACCACCA
CCACCACCAACAACATCAGGTGATCGAACAAGCGCTATCCGCTCTGGTGA
ACGTCATGTTCCGAAGCGACGCGAACCGAGGTCTCGCCGAAGAGTGCGGG
GCAACGCCGCCTACCATCACGATAATGGATGCCGCAGAGGAGGAGGGGAT
CCTGGTCCAGGTGAGCACAAAACCTTCAAAGGAAGAGGGGCGCTTGAGCA
GACAGGCTGGCCGATAGTCGGGGAGTCGGTCCATGTTTCTTTTTTAGCAT
CTGTTGAAAATTAACACGTGACCACATAGACAACCCCCCCCCCCCCTCCT
CCCACAACCGCCCCTTTCCGTGCAACTCACCGACGTCGGTCGCCAACGTC
ACGCGAAAATCGGCGAACTGAATCCACGGGATAAAAATCCACACGACAGG
CATGTCTGACCCTTGCCAATATGGCGTACGGCAATCAGTTCGCGGCGCTG
AGGCTGCTGGAGGCGGGGGCGGACAAGGCGGCGTGCGACCTCATCAGGGA
CTCTGACAAGACGAAGCACAGCAATGTTATGGAAGCGGTGAGAGTCTCTC
TGTCTCTCTCTCTTGCTCTGTGTGTGTGTGTGTGTGTGTCTCTCTCTCTC
TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGTGTCTTGCTCTCTG
TGTCTCTCTCTCTCTCTCTCTCTCTCTCTTTCTCTCTCTCTCTCTCTCTC
TCTCTCTCTGTGTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC
TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTTC
TCTCTCTCTATCTCCCTATACCCCTCTCTCTTAGTTGACCAGCAATTGGA
GGTCATAACATGGCCTGTCTGTTAGTCGAGATGCATCGACTGGTCTGGAT
ACGTCGGGTACAAACGAAGCCACCAAGCTTCAATGGCGAGCGGTCCACGG
ACGTGGGTACAGTTGTCGAACGTTCGGAAAGGTAGCGCTTCATACCAACA
TCTGGACAACAGGGCACCTCAAAACGCGAGTGGATGTTGTTCAGCGACCA
AACAAGCACGAGGGGTGCCACACGAACAATACTCTTCAAAGGCAATGCAC
AGGCGGCTGTTGTAGACCGTCCGTCGTAATATATGCATCATCGACTTCTC
TTCATGGTTGTGACACCCCGCCCCTTCTTCCCCTCCCCAAATGGAGCGAC
GGCTCCCCCCCTACGTAATAACTAACTCGTTTGCGTTTTCGGGGACACCC
GCATTAAAAATACAAATATCATAATGGTTTTCGATAATCGTGAAGAAGAA
AGCTGACCAATCCAGGTTCGCGGTGGTTTGGACAAAAGGGCTGCAATACG
TAAGGCTTGGAATGTAAACATTGGGGTGGGTGTAAACAAGTGGGAACAAG
TCTAAGTTAAAATTATTTATTGGTCACACTTCTATGCAAAGTTTGGATAC
CAAGGCCTTTTAGAATATTTTGTTGGCGGCTGAGAGAAACTTTCTTCACG
CACGTACTTCGCAAACAGATTCCTCACCGGAGGAGCCGCACACGTGTATC
CCTTGCCGTGATCCCTGTAGAACCCCGGATCCACCTCTCGGCGACGAAAC
TACTTGGAAAGTACAAAGTTTGTCTGAAACAGACCCTCTGAAATGAAACA
GACCCTCTGACCTGACCGGCGAGAACCCGGCGAGGAACACCCCGGCATTG
TTGGGGTACTGGGGTACCAAGATAGGATGTTGGATGTTCCAGATTTTGTT
TTTACCTCACATAGCGTGTAGAGGGGAGCGAAGGGCCTCCAGATTATCTG
TATCGCTTCTTTTACTTTTATGCTTTGCTGAGCCCCTTCGGATCCACCTT
TTCAAAAATAAACAATTAATCAAAGATGGAACCTACCCCACACTAGAGCA
AGGACTCGATATGGGGTTTAAACGGTATTCCATACAGTGACGTGATATTT
GGCGAAGCGAGCAGAAAAACAATCCAAAATATCAGAAGGGTTCAACATCT
CCCCTGCAAAGATTTGCGAGGTCGGCCAACAAGTATTCAGGCGGGTAGAT
GCCCGCCGTGATGCCGTCATGTTTTATTTTTCAGTATACCCTTTCTAAGG
GTAAGTAAGCTTGTGACCACAGCAATTGACCGTGTCGAGTGTTTGATTGG
TACGGACGTACGGAGGTATTGGATGAAGAGATCGGAACGGTTTTTAATGT
GAAGAAAACAGCAACAACAATAACAACTCTGAAATTAATTTTCCCCCAAT
GCTTGTCTTGTGTATATGGACTACGAATTTTGTGCGAGTAGCTTTAATAG
TGAGGGAGGGTTAGTGTGCCTACAACAGCAGTCCCCCTGGAACGATGATT
TCGCAGACTGGGCGTAGACTACTAACGGTTGGATAAAAATTATAACTACT
TCAGCAAAATGATAGTCGCACGCCCATTCCCGTATTAGTTTGAGGAAACA
GCGGTTCTGCAATTTTTGCACCAGAAGGATGACAGTTGGGGGTAAATATC
CGCTCGTCTAAGCTGCGCGCGGAATCGTCAGTGTGCAGATACCGATGGGG
TTCCGTACGAAGGAGAGCTCTTGTTTTCAAAACACTCAAATTTGTCCTGT
TTTGACATATGTATGTACCAAGACCTGGGGAAACATAATCAGTATGTAGC
AGGAGAACTCCCTCCTAAGGCCGCCTCTCTCTGCTCCCCTCTGACCCAAA
CATCGAACAGGCGTTTATCTGCCTGGGCAATCTGGCCAACAACGCCCTCA
ACCAGGCTCATGTGGGCGCGGGGGGCAGCGTGGACGTTGCTCTGACCGTG
TGCAAGCACTGCCAGAGCGCCAGGTGAAGACACGCGCTCGACGGTTGTAC
CGTACACGCCCGAGATGCCGATGTTCTCATGCCCCTCTCTTAGTATGCTT
GTTCGCATCTGGGAGGGCACCTAGGTCGTGGTAAGAACTACATATCTTCC
TTTGGGTACATGGGAGATGGACATATCTCAGCCATTTGGGACATGTGCCG
GCCTTTCCTAGGACGAACCGTGACTAACTGCCGTGTCGCATCCGTTGGGG
GTGGGGGATATTTGTGGAGTGATTTGAGGTATAATCGCCCCTTCACGGTG
AGTGTTCTTGCCCCTCAACCCCCTTTGTGCTGGGGAATATTTTAGGAAAC
CCGCCGAAGTCGTTTCTAGGCGTCACAGCACCCACTCCGTCCCCCCTGCC
CTGCATTGGTCCAGAGGTGGTATAGATGGCCGAATGGCTAGCCCTCTGCC
CCCTTTCGCCCCGGGACCAGCCAGTAAGCCGCGCGCTCAAACGCCAGCTT
GCACTCTGCTTCGCAAGCAACAAAAGGTGGTGTGCCCTCCCCTCTCCCGT
CTCCCGTCTCCCAGGGTAGTGCGGGCGGCGGCACAAGCGCTCTGCTCGCT
GACGCTCAAGAACCAGGCCAACAAGACGCGCTGCGCGAGCTTGGACGCGG
TGGCGACCCTGCTGGAGCTGGCTGTGGCGTGGGGAGTTGCGGAAGACGGT
GAGAGGACTAGCGCATAGGCATCGGCCGTTCAAATCATCCGCTGAACTGC
TACTTCAATCCTTCGTTGACTGCGCCTCGAGAAAAGGCTGTGTATCTGGG
TGCCTGGTCGAACGTACGCACGCCCATCGTCTTCTCCGCTGTATCTGCTT
GTCCCTTGGTGGTAGATTTTGTTCGTTAGATGGACTTATGCACTAGACCA
CTCAGTCTCCACTAGACCACTCAGTCAAGCGCTTGACTGAGTGGTCTAGT
GCATAAGTCCATCTAACGAACAGATTTAGGGAGGACCACCTATCTGATCC
CCCACCTCGCCACGACGGTGTATTTATCAAACTCCCTAAAACAGCCCGCC
ATTGCGGCGCTGCATAAGCGTGCTATGTTCTTCTTAAAACCTTAAAAGGT
CGGAAGCAGGAACGTGCATACATACACGGAGAGTCCAAAACCACAACCAG
TGAGCCGCGAGCGCCATGAGCCATCTGTCTGTCCGTCCGTCGCCCGTCGC
ACACGACACCACACGAAAACTGAGAAATGGCAATCACAAAAACGACGGAA
TGGCATATTTACCGACACGACGTCGGCCGGGCTGTCGGTCGGCCGTCCAT
TCGTTCGACGGATGTACCATACATAACATCAAAAGGGGAAGAGGGCTCGA
GCCGGCAAAGCAGGTCGGCGCCGTCGTCCATCGCCGTCGAAGAGGAAGAG
GAGGCGGCCGCCGCAGCCCAGGCCGCCTCCTGCGTGGCGATCCTGATGCA
GCATCCGACCAACGCCCACGCCATGAAGAAGGGCGGGGGGCTCCGGCAGC
TGGCGGAGCTCGTCTTCGACTCGGAGGACGGCGAGGTTTGCTTGGGGGGC
CCTGGGGTCGTGTCGCGTCGTGTCGTGTTTTGAGGGGTGTTTTGGTTGCC
GCGGTAGGTTGGCCGCTGTTCGAATCGACAGCCCTGGAGTATGAAACTGG
TTGACGCGTGGTAATAACGGACGGTGATGGAGACGAAAAAAACTATTGTT
CTTGCTCTTCTTCATTTTTGGGCTGGCTCGTTGCCATAATGTTTTGTGCC
GAGTCGCCCCCCTATGTCGGGCCTTAAGGCTACTTGGTTTGTAGGAGACC
ACCCTCGTACTGACTGTCCTCCCTCCACGCCTAGCCTTAACCCCCCCCCC
CCCCCGACAATCTCGACAACACCACAGACACGAAACGACGAACACCCTCA
TTCTCTTAAAAAAAGCAGGTAATCATAGCCACCGCGAAGGCCATCGTCGT
TCTCCTGCCAGAACCAGAGGAGCTGGTGCGGACGTTCCGCAACGGCCAGG
TCTCCCAAGCCGAGGAGGCGGGCGCCCACGAGGCGTTGATGCGGTGTCAA
GAGTGGGCGTTCGGGCGAAAGGCGCCGCCGTCGTGGCTGGTCTACGGGCT
CGACCTTCTCGGCGGCGAAATAAAAGGTAGACGGCCATCTGCGGTTAGCA
TGCGTCTTCACGGGGGGGGTGAAAAAGAAAATTAAAATGCAGATTTTTCA
TCTGTGGATACTTGTGTAGTGAGTACCGGAAGCGTGCGGAGGTGTGAAAC
CCTGATTTCGGGATCGAGATCCGATTGGTTTCTCGTCGCCACGGTCCAGC
ATAGGCCGTCGTTTCCCTGTGGCGTTTATGTAGTAAGTGTAGATAGACTC
CATATGTATTCTACTAGTGAGGTATGTTCTCCCCCCTAGAGACTAAATTA
ACACCCCCACACCCCCACTATCTCCAAAGCTTCAAAGAAATCTAAATGGA
TCGTAGAGTTTCGGTCGGTCGTGGTCTTGTTGGTCGACAGGTGTCCAATA
CATTTTCTCGTTTTTGCGATTGAGGCTGGCAAAGGTCTAGACGAATCGTT
CCGTCCCTTCCACCGCACTTCTCTGCCACAAATCACAGCGCTCGAGGCCC
GTCTGAAGCAGGAAGGAGCGAGCTCGTTGCGTAAGCCCGAAGAATTTTTC
GTGTCGACCGACTTTTTCGAGGAGCGAGAGACGGTAATCCCCCCGGACGT
CACAGTGGCTGAGGACGAGGACTTAGGCGGGATGCTCTTCCACGTGTTTT
AAACCTACGATAGGCCAAGCTGCTGGGTGGTTACTTGGTTGGTTTACGGT
GGTAATTGTTATCGTGTTTGTTGTGCTATGACGCTGCAGAGGGGATACTA
GTGAAATTATGGATATGTAGTCTAGTGTGCGTAGTCGAGAGATGGATAGC
ATGGCGCGACGTTTCCAAACGCCCCC
back to top

Coding sequence (CDS) from alignment at L-elsbetiae_contig7402:220..9545-

>mRNA_L-elsbetiae_contig7402.16289.1 ID=mRNA_L-elsbetiae_contig7402.16289.1|Name=mRNA_L-elsbetiae_contig7402.16289.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=3366bp|location=Sequence derived from alignment at L-elsbetiae_contig7402:220..9545- (Laminarionema elsbetiae ELsaHSoW15)
ATGGACACGCAGCTTCTCTCGCTTGAAGGGAACATGCGATGGACACGCAG
CTTCTCTCGCTTGAAGGGAACATGCGACAACTGTGCGAAGCAACTGAGGA
GAAAGGCACTCGAATGATACGGCAGGCAAAGCGAACGGCGGATTCGGAGA
GAGAGGAGAAGGCCATTTTGTGCCAGTGGCTTAATGGACAACTGTGCGAA
GCAACTGAGGAGAAAGGCACTCGAATGATACGGCAGGCAAAGCGAACGGC
GGATTCGGAGAGAGAGGAGAAGGCCATTTTGTGCCAGTGGCTTAATGGAT
TTCTGGTTGGCGCGTCTAGCGAGCCTCAGCTGTCCTCGATGGACTTCACA
TTTGCGAGATTTGCTCTCAACATGGCCATGGCCTCGAGCAGGACAGAACC
TGAGGTGATGCTGAAGGCCGGGGCTCCGGCGTTCTTGGTTGGGATGCTGT
CCAACCCCAACGAGCTGATTTCTGGTTGGCGCGTCTAGCGAGCCTCAGCT
GTCCTCGATGGACTTCACATTTGCGAGATTTGCTCTCAACATGGCCATGG
CCTCGAGCAGGACAGAACCTGAGGTGATGCTGAAGGCCGGGGCTCCGGCG
TTCTTGGTTGGGATGCTGTCCAACCCCAACGAGCTGGTGACTGGACCGGC
AGTTCTTGCCCTGTCGCAAATGGCACACCACGAGGCTTGTCAGCGTGCCC
TCGGCCTTGCCGGGGGCGTCCCGCCCCTGGTACTCTTGTGCTTCACAAGC
CAGTCCCCTGCGGTCCTTACGCAGGTGACTGGACCGGCAGTTCTTGCCCT
GTCGCAAATGGCACACCACGAGGCTTGTCAGCGTGCCCTCGGCCTTGCCG
GGGGCGTCCCGCCCCTGGTACTCTTGTGCTTCACAAGCCAGTCCCCTGCG
GTCCTTACGCAGGCGTGCATCTCCCTAGCCCAGTTGAGCCGATACCCGCC
GAACAGGGCGATCATAGCCGGCAAGGGCGGCATCGCGGCTATGGTACGCC
TCCTTGAAGGGTTCAGAAGAGAAGATCGCGTCACCGTGCAGGCGTGCATC
TCCCTAGCCCAGTTGAGCCGATACCCGCCGAACAGGGCGATCATAGCCGG
CAAGGGCGGCATCGCGGCTATGGTACGCCTCCTTGAAGGGTTCAGAAGAG
AAGATCGCGTCACCGTGCAGGTGATCGAACAAGCGCTATCCGCTCTGGTG
AACGTCATGTTCCGAAGCGACGCGAACCGAGGTCTCGCCGAAGAGTGCGG
GGCAACGCCGCCTACCATCACGATAATGGATGCCGCAGAGGAGGAGGGGA
TCCTGGTCCAGGTGATCGAACAAGCGCTATCCGCTCTGGTGAACGTCATG
TTCCGAAGCGACGCGAACCGAGGTCTCGCCGAAGAGTGCGGGGCAACGCC
GCCTACCATCACGATAATGGATGCCGCAGAGGAGGAGGGGATCCTGGTCC
AGGCATGTCTGACCCTTGCCAATATGGCGTACGGCAATCAGTTCGCGGCG
CTGAGGCTGCTGGAGGCGGGGGCGGACAAGGCGGCGTGCGACCTCATCAG
GGACTCTGACAAGACGAAGCACAGCAATGTTATGGAAGCGGCATGTCTGA
CCCTTGCCAATATGGCGTACGGCAATCAGTTCGCGGCGCTGAGGCTGCTG
GAGGCGGGGGCGGACAAGGCGGCGTGCGACCTCATCAGGGACTCTGACAA
GACGAAGCACAGCAATGTTATGGAAGCGGCGTTTATCTGCCTGGGCAATC
TGGCCAACAACGCCCTCAACCAGGCTCATGTGGGCGCGGGGGGCAGCGTG
GACGTTGCTCTGACCGTGTGCAAGCACTGCCAGAGCGCCAGGCGTTTATC
TGCCTGGGCAATCTGGCCAACAACGCCCTCAACCAGGCTCATGTGGGCGC
GGGGGGCAGCGTGGACGTTGCTCTGACCGTGTGCAAGCACTGCCAGAGCG
CCAGGGTAGTGCGGGCGGCGGCACAAGCGCTCTGCTCGCTGACGCTCAAG
AACCAGGCCAACAAGACGCGCTGCGCGAGCTTGGACGCGGTGGCGACCCT
GCTGGAGCTGGCTGTGGCGTGGGGAGTTGCGGAAGACGGGTAGTGCGGGC
GGCGGCACAAGCGCTCTGCTCGCTGACGCTCAAGAACCAGGCCAACAAGA
CGCGCTGCGCGAGCTTGGACGCGGTGGCGACCCTGCTGGAGCTGGCTGTG
GCGTGGGGAGTTGCGGAAGACGGGGAAGAGGGCTCGAGCCGGCAAAGCAG
GTCGGCGCCGTCGTCCATCGCCGTCGAAGAGGAAGAGGAGGCGGCCGCCG
CAGCCCAGGCCGCCTCCTGCGTGGCGATCCTGATGCAGCATCCGACCAAC
GCCCACGCCATGAAGAAGGGCGGGGGGCTCCGGCAGCTGGCGGAGCTCGT
CTTCGACTCGGAGGACGGCGAGGGGAAGAGGGCTCGAGCCGGCAAAGCAG
GTCGGCGCCGTCGTCCATCGCCGTCGAAGAGGAAGAGGAGGCGGCCGCCG
CAGCCCAGGCCGCCTCCTGCGTGGCGATCCTGATGCAGCATCCGACCAAC
GCCCACGCCATGAAGAAGGGCGGGGGGCTCCGGCAGCTGGCGGAGCTCGT
CTTCGACTCGGAGGACGGCGAGGTAATCATAGCCACCGCGAAGGCCATCG
TCGTTCTCCTGCCAGAACCAGAGGAGCTGGTGCGGACGTTCCGCAACGGC
CAGGTCTCCCAAGCCGAGGAGGCGGGCGCCCACGAGGCGTTGATGCGGTG
TCAAGAGTGGGCGTTCGGGCGAAAGGCGCCGCCGTCGTGGCTGGTCTACG
GGCTCGACCTTCTCGGCGGCGAAATAAAAGGTAATCATAGCCACCGCGAA
GGCCATCGTCGTTCTCCTGCCAGAACCAGAGGAGCTGGTGCGGACGTTCC
GCAACGGCCAGGTCTCCCAAGCCGAGGAGGCGGGCGCCCACGAGGCGTTG
ATGCGGTGTCAAGAGTGGGCGTTCGGGCGAAAGGCGCCGCCGTCGTGGCT
GGTCTACGGGCTCGACCTTCTCGGCGGCGAAATAAAAGCGCTCGAGGCCC
GTCTGAAGCAGGAAGGAGCGAGCTCGTTGCGTAAGCCCGAAGAATTTTTC
GTGTCGACCGACTTTTTCGAGGAGCGAGAGACGGTAATCCCCCCGGACGT
CACAGTGGCTGAGGACGAGGACTTAGGCGGGATGCTCTTCCACGTGTTTT
AACGCTCGAGGCCCGTCTGAAGCAGGAAGGAGCGAGCTCGTTGCGTAAGC
CCGAAGAATTTTTCGTGTCGACCGACTTTTTCGAGGAGCGAGAGACGGTA
ATCCCCCCGGACGTCACAGTGGCTGAGGACGAGGACTTAGGCGGGATGCT
CTTCCACGTGTTTTAA
back to top