prot_L-elsbetiae_contig7386.16261.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig7386.16261.1
Unique Nameprot_L-elsbetiae_contig7386.16261.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length99
Homology
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BLAST of mRNA_L-elsbetiae_contig7386.16261.1 vs. uniprot
Match: D7G7S1_ECTSI (Light harvesting complex protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7S1_ECTSI)

HSP 1 Score: 147 bits (371), Expect = 1.360e-42
Identity = 71/92 (77.17%), Postives = 78/92 (84.78%), Query Frame = 0 
Query:    7 EFWVFSLLGMAFIEYNTITKTCVKPGEVTCESGLKEDYTPGDLGFDPLGLKPKTEADLVTMQTKEPNNGRLAMIGIAGMLVQELINPADILG 98
            EFW FSLLGMAFIEYNTITK   +P  VT E GL+++Y+PGDLGFDPL LKPK +A L  MQTKE NNGRLAMIGIAGMLVQEL+NPADILG
Sbjct:  130 EFWAFSLLGMAFIEYNTITKAYAEPSPVTGEGGLRDEYSPGDLGFDPLNLKPKDQAGLEKMQTKELNNGRLAMIGIAGMLVQELVNPADILG 221
[Close]
BLAST of mRNA_L-elsbetiae_contig7386.16261.1 vs. uniprot
Match: A0A6H5K8D0_9PHAE (LHCP protein n=7 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K8D0_9PHAE)

HSP 1 Score: 143 bits (361), Expect = 1.930e-41
Identity = 73/96 (76.04%), Postives = 76/96 (79.17%), Query Frame = 0 
Query:    3 VLVAEFWVFSLLGMAFIEYNTITKTCVKPGEVTCESGLKEDYTPGDLGFDPLGLKPKTEADLVTMQTKEPNNGRLAMIGIAGMLVQELINPADILG 98
            V+VAEFW FSLLGMAFIEYNTI      P  VT E GLKEDY PGDLGFDPL LKP  EA L  M+TKE NNGRLAMIGIAGML QEL+NPADILG
Sbjct:   97 VIVAEFWAFSLLGMAFIEYNTIMTAFDTPSAVTGEGGLKEDYMPGDLGFDPLNLKPDDEAALDVMKTKELNNGRLAMIGIAGMLAQELVNPADILG 192
[Close]
BLAST of mRNA_L-elsbetiae_contig7386.16261.1 vs. uniprot
Match: D7G7Q6_ECTSI (Light harvesting complex protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G7Q6_ECTSI)

HSP 1 Score: 144 bits (363), Expect = 2.140e-41
Identity = 73/92 (79.35%), Postives = 75/92 (81.52%), Query Frame = 0 
Query:    7 EFWVFSLLGMAFIEYNTITKTCVKPGEVTCESGLKEDYTPGDLGFDPLGLKPKTEADLVTMQTKEPNNGRLAMIGIAGMLVQELINPADILG 98
            EFWVFSLLGMAFIEYNTI      P  VT E GLKEDY PGDLGFDPL LKP+ EA L  M+TKE NNGRLAMIGIAGMLVQELINPADILG
Sbjct:  129 EFWVFSLLGMAFIEYNTIMTAFETPSAVTGEGGLKEDYVPGDLGFDPLNLKPEDEAALDVMKTKELNNGRLAMIGIAGMLVQELINPADILG 220
[Close]
BLAST of mRNA_L-elsbetiae_contig7386.16261.1 vs. uniprot
Match: A0A6H5JAU1_9PHAE (LHCP protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAU1_9PHAE)

HSP 1 Score: 140 bits (353), Expect = 1.060e-40
Identity = 71/96 (73.96%), Postives = 76/96 (79.17%), Query Frame = 0 
Query:    3 VLVAEFWVFSLLGMAFIEYNTITKTCVKPGEVTCESGLKEDYTPGDLGFDPLGLKPKTEADLVTMQTKEPNNGRLAMIGIAGMLVQELINPADILG 98
            V+VAEFWVFSLLGMAFIEYNTI      P  +T E GLKEDY PGDLGFDPL LKP   A L  M+TKE NNGRLAMIGIAGM+ QEL+NPADILG
Sbjct:   60 VIVAEFWVFSLLGMAFIEYNTIITAFDTPSALTGEGGLKEDYMPGDLGFDPLNLKPDDVAALDVMKTKELNNGRLAMIGIAGMMAQELVNPADILG 155
[Close]
BLAST of mRNA_L-elsbetiae_contig7386.16261.1 vs. uniprot
Match: A0A6H5JVY1_9PHAE (LHCP protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVY1_9PHAE)

HSP 1 Score: 138 bits (347), Expect = 4.190e-40
Identity = 69/92 (75.00%), Postives = 72/92 (78.26%), Query Frame = 0 
Query:    7 EFWVFSLLGMAFIEYNTITKTCVKPGEVTCESGLKEDYTPGDLGFDPLGLKPKTEADLVTMQTKEPNNGRLAMIGIAGMLVQELINPADILG 98
            +FW FSLLGMAFIEYNTI      P  VT E GLKEDY PGDLGFDPL LKP  EA L  M+TKE NNGRLAMIGIAGML QEL+NPADILG
Sbjct:   40 QFWAFSLLGMAFIEYNTIMTAFDTPSAVTGEGGLKEDYMPGDLGFDPLNLKPDDEAALDVMKTKELNNGRLAMIGIAGMLAQELVNPADILG 131
[Close]
BLAST of mRNA_L-elsbetiae_contig7386.16261.1 vs. uniprot
Match: D7G7S5_ECTSI (Light harvesting complex protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7S5_ECTSI)

HSP 1 Score: 139 bits (349), Expect = 1.430e-39
Identity = 69/92 (75.00%), Postives = 72/92 (78.26%), Query Frame = 0 
Query:    7 EFWVFSLLGMAFIEYNTITKTCVKPGEVTCESGLKEDYTPGDLGFDPLGLKPKTEADLVTMQTKEPNNGRLAMIGIAGMLVQELINPADILG 98
            EFW FSLLGMAF+EYNTI      P  VT E GLKEDY PGDLGFDPL LKP  EA L  M+TKE NNGRLAMIGIAGML QEL+NPADILG
Sbjct:  105 EFWAFSLLGMAFVEYNTIMTAFDTPSAVTGEGGLKEDYIPGDLGFDPLNLKPDDEAALDVMKTKELNNGRLAMIGIAGMLAQELVNPADILG 196
[Close]
BLAST of mRNA_L-elsbetiae_contig7386.16261.1 vs. uniprot
Match: A0A6H5L7D2_9PHAE (LHCP protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7D2_9PHAE)

HSP 1 Score: 133 bits (334), Expect = 2.530e-38
Identity = 66/91 (72.53%), Postives = 73/91 (80.22%), Query Frame = 0 
Query:    7 EFWVFSLLGMAFIEYNTITKTCVKPGEVTCESGLKEDYTPGDLGFDPLGLKPKTEADLVTMQTKEPNNGRLAMIGIAGMLVQELINPADIL 97
            EFW FSLLGM  IEYNTITK   +P  VT E GL++DY+ GDLGFDPL LKPK +A L TMQTKE NNGRLAMIGIAGMLVQEL+N  +IL
Sbjct:   22 EFWAFSLLGMVLIEYNTITKAYAEPSFVTGEGGLRDDYSLGDLGFDPLNLKPKDQAALETMQTKELNNGRLAMIGIAGMLVQELVNSINIL 112
[Close]
BLAST of mRNA_L-elsbetiae_contig7386.16261.1 vs. uniprot
Match: A0A6H5JG14_9PHAE (LHCP protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JG14_9PHAE)

HSP 1 Score: 132 bits (331), Expect = 2.700e-38
Identity = 64/83 (77.11%), Postives = 70/83 (84.34%), Query Frame = 0 
Query:   16 MAFIEYNTITKTCVKPGEVTCESGLKEDYTPGDLGFDPLGLKPKTEADLVTMQTKEPNNGRLAMIGIAGMLVQELINPADILG 98
            MAFIEYNTITK   +P  VT E GL+E+Y+PGDLGFDPL LKPK +A L  MQTKE NNGRLAMIGIAGMLVQEL+NPADILG
Sbjct:    1 MAFIEYNTITKAYAEPSPVTGEGGLREEYSPGDLGFDPLNLKPKDQAGLEKMQTKELNNGRLAMIGIAGMLVQELVNPADILG 83
[Close]
BLAST of mRNA_L-elsbetiae_contig7386.16261.1 vs. uniprot
Match: A0A6H5JWB4_9PHAE (LHCP protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWB4_9PHAE)

HSP 1 Score: 139 bits (350), Expect = 1.040e-37
Identity = 70/92 (76.09%), Postives = 72/92 (78.26%), Query Frame = 0 
Query:    7 EFWVFSLLGMAFIEYNTITKTCVKPGEVTCESGLKEDYTPGDLGFDPLGLKPKTEADLVTMQTKEPNNGRLAMIGIAGMLVQELINPADILG 98
            EFW FSLLGMAFIEYNTI      P  VT E GLKEDY PGDLGFDPL LKP  EA L  M+TKE NNGRLAMIGIAGML QEL+NPADILG
Sbjct:  301 EFWAFSLLGMAFIEYNTIMTAFDTPSAVTGEGGLKEDYMPGDLGFDPLNLKPDDEAALDVMKTKELNNGRLAMIGIAGMLAQELVNPADILG 392
[Close]
BLAST of mRNA_L-elsbetiae_contig7386.16261.1 vs. uniprot
Match: D7G7Q7_ECTSI (Light harvesting complex protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7Q7_ECTSI)

HSP 1 Score: 130 bits (328), Expect = 1.300e-36
Identity = 63/91 (69.23%), Postives = 72/91 (79.12%), Query Frame = 0 
Query:    7 EFWVFSLLGMAFIEYNTITKTCVKPGEVTCESGLKEDYTPGDLGFDPLGLKPKTEADLVTMQTKEPNNGRLAMIGIAGMLVQELINPADIL 97
            EFW FSLL +A IEYNTITK   +P  VT E GL+++Y+PGDLGFDPL LKP  +  L TMQTKE NNGRLAMIGIAG LVQEL+NP +IL
Sbjct:   84 EFWAFSLLALALIEYNTITKAYAEPSFVTGEGGLRDEYSPGDLGFDPLNLKPTDQTALETMQTKELNNGRLAMIGIAGTLVQELVNPTNIL 174
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig7386.16261.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G7S1_ECTSI1.360e-4277.17Light harvesting complex protein n=1 Tax=Ectocarpu... [more]
A0A6H5K8D0_9PHAE1.930e-4176.04LHCP protein n=7 Tax=Ectocarpus TaxID=2879 RepID=A... [more]
D7G7Q6_ECTSI2.140e-4179.35Light harvesting complex protein n=2 Tax=Ectocarpu... [more]
A0A6H5JAU1_9PHAE1.060e-4073.96LHCP protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 T... [more]
A0A6H5JVY1_9PHAE4.190e-4075.00LHCP protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 T... [more]
D7G7S5_ECTSI1.430e-3975.00Light harvesting complex protein n=1 Tax=Ectocarpu... [more]
A0A6H5L7D2_9PHAE2.530e-3872.53LHCP protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 T... [more]
A0A6H5JG14_9PHAE2.700e-3877.11LHCP protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 T... [more]
A0A6H5JWB4_9PHAE1.040e-3776.09LHCP protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 T... [more]
D7G7Q7_ECTSI1.300e-3669.23Light harvesting complex protein n=1 Tax=Ectocarpu... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR022796Chlorophyll A-B binding proteinPFAMPF00504Chloroa_b-bindcoord: 6..89
e-value: 6.4E-19
score: 69.0
IPR023329Chlorophyll a/b binding domain superfamilyGENE3D1.10.3460.10coord: 1..98
e-value: 1.0E-17
score: 66.6
IPR001344Chlorophyll A-B binding protein, plantPANTHERPTHR21649CHLOROPHYLL A/B BINDING PROTEINcoord: 9..92
NoneNo IPR availablePANTHERPTHR21649:SF63coord: 9..92
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..17
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 18..98
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..1
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 14..17
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 2..13
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..19
score: 0.672
NoneNo IPR availableSUPERFAMILY103511Chlorophyll a-b binding proteincoord: 5..97

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig7386contigL-elsbetiae_contig7386:2241..3026 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig7386.16261.1mRNA_L-elsbetiae_contig7386.16261.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig7386 657..3498 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig7386.16261.1 ID=prot_L-elsbetiae_contig7386.16261.1|Name=mRNA_L-elsbetiae_contig7386.16261.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=99bp
MLVLVAEFWVFSLLGMAFIEYNTITKTCVKPGEVTCESGLKEDYTPGDLG
FDPLGLKPKTEADLVTMQTKEPNNGRLAMIGIAGMLVQELINPADILG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR022796Chloroa_b-bind
IPR023329Chlorophyll_a/b-bd_dom_sf
IPR001344Chloro_AB-bd_pln