prot_L-elsbetiae_contig7384.16259.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig7384.16259.1
Unique Nameprot_L-elsbetiae_contig7384.16259.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length322
Homology
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BLAST of mRNA_L-elsbetiae_contig7384.16259.1 vs. uniprot
Match: A0A6H5KL58_9PHAE (SAP domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KL58_9PHAE)

HSP 1 Score: 68.9 bits (167), Expect = 3.300e-9
Identity = 45/105 (42.86%), Postives = 49/105 (46.67%), Query Frame = 0 
Query:    1 SPNQQCFASAITACARALDSRSALRLMMDMRADGVPPNLVVVNAVLDACGKGDAPDEALLLLRRMESAYGVRPDNVSYNSAISALSRAGRAREAKGLLNEMTDRG 105
            SPN QC+ASAITACARA D RS                                        R ME AYGV+         IS LSRAGRAREAK LLNEM++RG
Sbjct:  171 SPNSQCYASAITACARAHDPRSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRGMEKAYGVKXXXXXXXXXISGLSRAGRAREAKALLNEMSERG 275
[Close]
BLAST of mRNA_L-elsbetiae_contig7384.16259.1 vs. uniprot
Match: D8LB51_ECTSI (SAP domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LB51_ECTSI)

HSP 1 Score: 65.1 bits (157), Expect = 6.340e-8
Identity = 43/105 (40.95%), Postives = 47/105 (44.76%), Query Frame = 0 
Query:    1 SPNQQCFASAITACARALDSRSALRLMMDMRADGVPPNLVVVNAVLDACGKGDAPDEALLLLRRMESAYGVRPDNVSYNSAISALSRAGRAREAKGLLNEMTDRG 105
            SPN QC+ASAITACARA D RS                                        R ME AYGV+            LSRAGRAREAK LLNEM++RG
Sbjct:  359 SPNSQCYASAITACARAHDPRSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRGMEKAYGVKXXXXXXXXXXXGLSRAGRAREAKALLNEMSERG 463
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BLAST of mRNA_L-elsbetiae_contig7384.16259.1 vs. uniprot
Match: A0A7S2VFJ2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2VFJ2_9STRA)

HSP 1 Score: 60.1 bits (144), Expect = 1.580e-6
Identity = 35/97 (36.08%), Postives = 55/97 (56.70%), Query Frame = 0 
Query:   11 ITACARALDSRSALRLMMDMRADGVPPNLVVVNAVLDACGKGDAPDEALLLLRRMESAYGVRPDNVSYNSAISALSRAGRAREAKGL--LNEMTDRG 105
            + AC+RA   R  L   + ++   VPPN+    +++  C +  +  +A+ LL+ ME  YGV P++V YN+A+SA  RA   + A  L  L E +DRG
Sbjct:  190 VDACSRARPVRLDLAFQI-LKDSPVPPNVYTFGSLMSVCAREGSVGDAVKLLKSMEEEYGVAPNSVVYNTAVSACGRADPPQPAMALKLLQEASDRG 285
[Close]
BLAST of mRNA_L-elsbetiae_contig7384.16259.1 vs. uniprot
Match: A0A445MCY4_ENSVE (Uncharacterized protein n=1 Tax=Ensete ventricosum TaxID=4639 RepID=A0A445MCY4_ENSVE)

HSP 1 Score: 58.5 bits (140), Expect = 7.100e-6
Identity = 34/87 (39.08%), Postives = 47/87 (54.02%), Query Frame = 0 
Query:   17 ALDSRS--ALRLMMDMRADGVPPNLVVVNAVLDACGKGDAPDEALLLLRRMESAYGVRPDNVSYNSAISALSRAGRAREAKGLLNEM 101
            A+ SR+  AL+L   M   G+ P+ V   A+L AC  G   D+ L++   M   YGV P    Y   + A SRAGR +EA+G+L  M
Sbjct:  382 AMSSRADLALQLFASMICHGLRPDGVAFLALLSACCHGGLVDQGLMIFEAMSKVYGVVPHKEHYTCMMDAFSRAGRLKEAEGILRGM 468
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BLAST of mRNA_L-elsbetiae_contig7384.16259.1 vs. uniprot
Match: A0A7S4DGX5_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DGX5_HETAK)

HSP 1 Score: 54.3 bits (129), Expect = 9.150e-6
Identity = 31/77 (40.26%), Postives = 46/77 (59.74%), Query Frame = 0 
Query:    2 PNQQCFASAITACARALDSRSALRLMMDMRADGVPPNLVVVNAVLDACGKGDAPDEALLLLRRMESAYGVRPDNVSY 78
            P+Q+ + +AI AC      R+ALRL+ +M A G+PP+    NA L A G+   P EAL LL+++++      D VSY
Sbjct:   24 PDQRSYTTAIVACREDGRWRAALRLLGEMGARGLPPDTAAANAALSALGRAGRPREALALLQQLQADGAA--DRVSY 98
[Close]
BLAST of mRNA_L-elsbetiae_contig7384.16259.1 vs. uniprot
Match: A0A427A8E1_ENSVE (Uncharacterized protein n=1 Tax=Ensete ventricosum TaxID=4639 RepID=A0A427A8E1_ENSVE)

HSP 1 Score: 57.8 bits (138), Expect = 9.260e-6
Identity = 33/87 (37.93%), Postives = 46/87 (52.87%), Query Frame = 0 
Query:   17 ALDSRS--ALRLMMDMRADGVPPNLVVVNAVLDACGKGDAPDEALLLLRRMESAYGVRPDNVSYNSAISALSRAGRAREAKGLLNEM 101
            A+ SR+  AL+L   M   G+ P+ V    +L AC  G   D+ L++   M   YGV P    Y   + A SRAGR +EA+G+L  M
Sbjct:  188 AMSSRADLALQLFASMICHGLRPDGVAFLGLLSACCHGGLVDQGLMIFEAMSKVYGVVPHKEHYTCMMDAFSRAGRLKEAEGILRRM 274
[Close]
BLAST of mRNA_L-elsbetiae_contig7384.16259.1 vs. uniprot
Match: A0A5P1E664_ASPOF (DYW_deaminase domain-containing protein n=3 Tax=Asparagus officinalis TaxID=4686 RepID=A0A5P1E664_ASPOF)

HSP 1 Score: 57.4 bits (137), Expect = 1.300e-5
Identity = 31/81 (38.27%), Postives = 44/81 (54.32%), Query Frame = 0 
Query:   21 RSALRLMMDMRADGVPPNLVVVNAVLDACGKGDAPDEALLLLRRMESAYGVRPDNVSYNSAISALSRAGRAREAKGLLNEM 101
            + AL L  +M + G+ P+ V + AVL AC      +E L LL RM+  Y V P    Y+  +  L RAGR +EA GL+  +
Sbjct:   94 KEALGLFYEMESIGINPDFVTLTAVLSACSHSGLVNEGLKLLDRMQIDYLVEPTIEHYDCIVDLLGRAGRLKEALGLIQRI 174
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BLAST of mRNA_L-elsbetiae_contig7384.16259.1 vs. uniprot
Match: A0A804JKT7_MUSAM ((wild Malaysian banana) hypothetical protein n=1 Tax=Musa acuminata subsp. malaccensis TaxID=214687 RepID=A0A804JKT7_MUSAM)

HSP 1 Score: 57.0 bits (136), Expect = 2.130e-5
Identity = 34/87 (39.08%), Postives = 47/87 (54.02%), Query Frame = 0 
Query:   17 ALDSRS--ALRLMMDMRADGVPPNLVVVNAVLDACGKGDAPDEALLLLRRMESAYGVRPDNVSYNSAISALSRAGRAREAKGLLNEM 101
            A+ SRS  AL+L   M   G+ P+ V   A+L AC      D+ L++ + M   YGV P    Y   + A SRAGR +EA+G+L  M
Sbjct:  336 AMTSRSDLALQLFASMICHGLRPDGVAFLALLSACCHAGLLDQGLMIFKAMSKVYGVVPKKEHYTCMMDAFSRAGRLKEAEGILCSM 422
[Close]
BLAST of mRNA_L-elsbetiae_contig7384.16259.1 vs. uniprot
Match: A0A444DP47_ENSVE (Uncharacterized protein n=1 Tax=Ensete ventricosum TaxID=4639 RepID=A0A444DP47_ENSVE)

HSP 1 Score: 57.0 bits (136), Expect = 2.270e-5
Identity = 33/87 (37.93%), Postives = 46/87 (52.87%), Query Frame = 0 
Query:   17 ALDSRS--ALRLMMDMRADGVPPNLVVVNAVLDACGKGDAPDEALLLLRRMESAYGVRPDNVSYNSAISALSRAGRAREAKGLLNEM 101
            A+ SR+  AL+L   M   G+ P+ V    +L AC  G   D+ L++   M   YGV P    Y   + A SRAGR +EA+G+L  M
Sbjct:  395 AMSSRADLALQLFASMICHGLRPDGVAFLGLLSACCHGGLVDQGLMIFEAMSKVYGVVPHKEHYTCMMDAFSRAGRLKEAEGILRGM 481
[Close]
BLAST of mRNA_L-elsbetiae_contig7384.16259.1 vs. uniprot
Match: UPI00098E4EB9 (pentatricopeptide repeat-containing protein At5g66520-like n=1 Tax=Asparagus officinalis TaxID=4686 RepID=UPI00098E4EB9)

HSP 1 Score: 56.6 bits (135), Expect = 3.090e-5
Identity = 31/81 (38.27%), Postives = 44/81 (54.32%), Query Frame = 0 
Query:   21 RSALRLMMDMRADGVPPNLVVVNAVLDACGKGDAPDEALLLLRRMESAYGVRPDNVSYNSAISALSRAGRAREAKGLLNEM 101
            + AL L  +M++ G+ P+ V + AVL AC      +E L LL RM+  Y V P    Y   +  L RAGR +EA GL+  +
Sbjct:  313 KEALGLFYEMQSIGINPDSVTLTAVLSACSHSGLVNEGLKLLDRMQIDYLVEPTIEHYGCIVDLLGRAGRLKEALGLIQRI 393
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig7384.16259.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 13
Match NameE-valueIdentityDescription
A0A6H5KL58_9PHAE3.300e-942.86SAP domain-containing protein n=1 Tax=Ectocarpus s... [more]
D8LB51_ECTSI6.340e-840.95SAP domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A7S2VFJ2_9STRA1.580e-636.08Hypothetical protein (Fragment) n=1 Tax=Amphiprora... [more]
A0A445MCY4_ENSVE7.100e-639.08Uncharacterized protein n=1 Tax=Ensete ventricosum... [more]
A0A7S4DGX5_HETAK9.150e-640.26Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A427A8E1_ENSVE9.260e-637.93Uncharacterized protein n=1 Tax=Ensete ventricosum... [more]
A0A5P1E664_ASPOF1.300e-538.27DYW_deaminase domain-containing protein n=3 Tax=As... [more]
A0A804JKT7_MUSAM2.130e-539.08(wild Malaysian banana) hypothetical protein n=1 T... [more]
A0A444DP47_ENSVE2.270e-537.93Uncharacterized protein n=1 Tax=Ensete ventricosum... [more]
UPI00098E4EB93.090e-538.27pentatricopeptide repeat-containing protein At5g66... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 146..179
e-value: 2.2E-7
score: 28.6
coord: 41..74
e-value: 0.0013
score: 16.8
coord: 217..248
e-value: 4.3E-5
score: 21.4
coord: 76..109
e-value: 2.2E-8
score: 31.8
coord: 111..145
e-value: 0.002
score: 16.1
coord: 181..215
e-value: 3.8E-7
score: 27.9
coord: 286..320
e-value: 6.2E-5
score: 20.9
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 286..316
e-value: 4.4E-4
score: 20.3
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 73..121
e-value: 5.2E-11
score: 42.6
IPR002885Pentatricopeptide repeatPFAMPF13812PPR_3coord: 201..261
e-value: 1.6E-8
score: 34.5
coord: 132..191
e-value: 3.5E-12
score: 46.2
coord: 7..51
e-value: 1.0E-5
score: 25.5
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 249..283
score: 10.019
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 214..248
score: 10.424
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 109..143
score: 9.558
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 284..318
score: 9.876
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 74..108
score: 12.715
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 144..178
score: 11.597
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 3..37
score: 8.692
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 179..213
score: 11.729
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 38..68
score: 7.826
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 221..322
e-value: 1.9E-24
score: 88.0
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 1..136
e-value: 3.8E-38
score: 133.6
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 137..209
e-value: 2.9E-17
score: 64.8
NoneNo IPR availablePANTHERPTHR46128FAMILY NOT NAMEDcoord: 175..322
coord: 2..138

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig7384contigL-elsbetiae_contig7384:464..9602 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig7384.16259.1mRNA_L-elsbetiae_contig7384.16259.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig7384 464..9602 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig7384.16259.1 ID=prot_L-elsbetiae_contig7384.16259.1|Name=mRNA_L-elsbetiae_contig7384.16259.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=322bp
SPNQQCFASAITACARALDSRSALRLMMDMRADGVPPNLVVVNAVLDACG
KGDAPDEALLLLRRMESAYGVRPDNVSYNSAISALSRAGRAREAKGLLNE
MTDRGLKPDKVSFAAAMQGFATAGDPRNAASLSDEMRRSGIEMDVVSYGT
AVSACAKAGDIQGALKLIKEMKEAGVEANTVVYNSALDACGRAGKPKVAA
KLLRKMGEAGVVPNATSYTGAIAACSRAGDGDKALEWLNIMSDEGIAPEA
ICYNYAMAACGRSGGDKQAEWLLKEMRDNGVTPNRISYSAAMFALGKAGR
LPDVLGLLEEMHREGVEADEVT
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002885Pentatricopeptide_repeat
IPR011990TPR-like_helical_dom_sf