prot_L-elsbetiae_contig7377.16250.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig7377.16250.1
Unique Nameprot_L-elsbetiae_contig7377.16250.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length172
Homology
BLAST of mRNA_L-elsbetiae_contig7377.16250.1 vs. uniprot
Match: A0A6H5KBT2_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBT2_9PHAE)

HSP 1 Score: 252 bits (644), Expect = 4.250e-79
Identity = 132/173 (76.30%), Postives = 145/173 (83.82%), Query Frame = 0
Query:    2 PLDQVRRAVWGMLYADDAGVVSRSANGLARVMTIIVVEVFGEFGLTVSEKKTETLLMRVKEKQSPPSXXXXP--LVIEAAGQTYAQTTVFKYLGGLITEHGDLTREINFRNGAASGCMRRYGPELYDRPRAPFRLKIRLLRAEPMEALLYGCMTWAPRIEHYRLLTSIHLRLL 172
            PLD+VRRAVWGMLYADDAGVVSRSA GLAR+MTIIV EVFGEFGLTVSEKKTETLLMR K+K +  S    P  L IEAAGQ YAQTT F+YLGGL+ EHGDLTREIN+R+  A  C+RRYG EL+DRP+APFRLKIRLLRAE MEALLYGCMTW+P   HY+ L SIH RLL
Sbjct:  269 PLDRVRRAVWGMLYADDAGVVSRSAEGLARMMTIIV-EVFGEFGLTVSEKKTETLLMRAKDKPTTTSQPAPPPPLTIEAAGQKYAQTTEFRYLGGLVNEHGDLTREINYRSRGAWACLRRYGRELFDRPQAPFRLKIRLLRAEAMEALLYGCMTWSPLSGHYQTLRSIHHRLL 440          
BLAST of mRNA_L-elsbetiae_contig7377.16250.1 vs. uniprot
Match: A0A6H5L6A1_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6A1_9PHAE)

HSP 1 Score: 247 bits (631), Expect = 6.680e-78
Identity = 129/173 (74.57%), Postives = 144/173 (83.24%), Query Frame = 0
Query:    2 PLDQVRRAVWGMLYADDAGVVSRSANGLARVMTIIVVEVFGEFGLTVSEKKTETLLMRVKEKQSPPSXXXXP--LVIEAAGQTYAQTTVFKYLGGLITEHGDLTREINFRNGAASGCMRRYGPELYDRPRAPFRLKIRLLRAEPMEALLYGCMTWAPRIEHYRLLTSIHLRLL 172
            PLD+VRRAVWG+LYADDAGVVSRSA GLAR+MTIIV EVFGEFGLTVSEKKTETLLMR K+K +  S    P  L IEAAGQ YAQTT F+YLGGL+ EHGDLTREIN+R+  A  C+RRYG EL+DRP+APFRLKIRLL+AE MEALLYGCM W+P   HY+ L SIH RLL
Sbjct:  215 PLDRVRRAVWGVLYADDAGVVSRSAEGLARMMTIIV-EVFGEFGLTVSEKKTETLLMRAKDKPTTTSQPIPPPPLTIEAAGQKYAQTTEFRYLGGLVNEHGDLTREINYRSRGAWACLRRYGRELFDRPQAPFRLKIRLLQAEAMEALLYGCMAWSPLSGHYQTLRSIHHRLL 386          
BLAST of mRNA_L-elsbetiae_contig7377.16250.1 vs. uniprot
Match: A0A6H5K8C3_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8C3_9PHAE)

HSP 1 Score: 251 bits (640), Expect = 7.480e-77
Identity = 131/173 (75.72%), Postives = 145/173 (83.82%), Query Frame = 0
Query:    2 PLDQVRRAVWGMLYADDAGVVSRSANGLARVMTIIVVEVFGEFGLTVSEKKTETLLMRVKEKQSPPSXXXXP--LVIEAAGQTYAQTTVFKYLGGLITEHGDLTREINFRNGAASGCMRRYGPELYDRPRAPFRLKIRLLRAEPMEALLYGCMTWAPRIEHYRLLTSIHLRLL 172
            PLD+VRRAVWGMLYADDAGVVSRSA GLAR+MTIIV EVFGEFGLTVSEKKTETLLMR K+K +  S    P  L IEAAGQ YAQTT F+YLGGL+ EHGDLTREIN+R+  A  C+RRYG EL+DRP+APFRLKIRLL+AE MEALLYGCMTW+P   HY+ L SIH RLL
Sbjct:  392 PLDRVRRAVWGMLYADDAGVVSRSAEGLARMMTIIV-EVFGEFGLTVSEKKTETLLMRAKDKPTTTSQPAPPPPLTIEAAGQKYAQTTEFRYLGGLVNEHGDLTREINYRSRGAWACLRRYGRELFDRPQAPFRLKIRLLQAEAMEALLYGCMTWSPLSGHYQTLRSIHHRLL 563          
BLAST of mRNA_L-elsbetiae_contig7377.16250.1 vs. uniprot
Match: A0A6H5KZ04_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZ04_9PHAE)

HSP 1 Score: 239 bits (609), Expect = 8.150e-77
Identity = 126/173 (72.83%), Postives = 140/173 (80.92%), Query Frame = 0
Query:    2 PLDQVRRAVWGMLYADDAGVVSRSANGLARVMTIIVVEVFGEFGLTVSEKKTETLLMRVKEKQSPPSXXXXP--LVIEAAGQTYAQTTVFKYLGGLITEHGDLTREINFRNGAASGCMRRYGPELYDRPRAPFRLKIRLLRAEPMEALLYGCMTWAPRIEHYRLLTSIHLRLL 172
            PLD+VRR VWGMLYADDAGVVSRSA GLAR MT I+VEVFGEFGLTVSEKKTETLLMR K+K +  S    P  L IEAAGQ YAQTT F+YLGGL+ EHGDLT EIN+R+  A   +RRYG EL+ RP+APFRLKIRLL+AE MEALLYGCMTW+P   HY+ L SIH RLL
Sbjct:   75 PLDRVRREVWGMLYADDAGVVSRSAEGLAR-MTAIIVEVFGEFGLTVSEKKTETLLMRAKDKPTTTSQPGPPPPLTIEAAGQKYAQTTEFRYLGGLVNEHGDLTPEINYRSRGAWAYLRRYGRELFGRPKAPFRLKIRLLQAEAMEALLYGCMTWSPLSRHYQTLRSIHHRLL 246          
BLAST of mRNA_L-elsbetiae_contig7377.16250.1 vs. uniprot
Match: A0A6H5K6C6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6C6_9PHAE)

HSP 1 Score: 237 bits (604), Expect = 1.090e-76
Identity = 124/165 (75.15%), Postives = 137/165 (83.03%), Query Frame = 0
Query:    2 PLDQVRRAVWGMLYADDAGVVSRSANGLARVMTIIVVEVFGEFGLTVSEKKTETLLMRVKEKQ------SPPSXXXXPLVIEAAGQTYAQTTVFKYLGGLITEHGDLTREINFRNGAASGCMRRYGPELYDRPRAPFRLKIRLLRAEPMEALLYGCMTWAPRIEH 160
            PLD+VRRAVWGMLYADDAGVVSRSA GLAR+MTIIV EVFGEFGLT+SEKKTETLLMR K+K       SPP     PL IEAAGQ YAQTT F+YLGGL+ EHGDLTREIN+R+  A  C+RRYG EL+DRP+APFRLKIRLL+AE MEALLYGCMTW+P   H
Sbjct:   63 PLDRVRRAVWGMLYADDAGVVSRSAEGLARMMTIIV-EVFGEFGLTLSEKKTETLLMRAKDKPTTSQPASPP-----PLTIEAAGQRYAQTTEFRYLGGLVNEHGDLTREINYRSRGAWACLRRYGRELFDRPQAPFRLKIRLLQAEAMEALLYGCMTWSPLSGH 221          
BLAST of mRNA_L-elsbetiae_contig7377.16250.1 vs. uniprot
Match: A0A6H5JBT6_9PHAE (Reverse transcriptase domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBT6_9PHAE)

HSP 1 Score: 241 bits (614), Expect = 5.880e-76
Identity = 124/171 (72.51%), Postives = 140/171 (81.87%), Query Frame = 0
Query:    2 PLDQVRRAVWGMLYADDAGVVSRSANGLARVMTIIVVEVFGEFGLTVSEKKTETLLMRVKEKQSPPSXXXXPLVIEAAGQTYAQTTVFKYLGGLITEHGDLTREINFRNGAASGCMRRYGPELYDRPRAPFRLKIRLLRAEPMEALLYGCMTWAPRIEHYRLLTSIHLRLL 172
            PLD+V+RAVWGMLYADDAGVVSRSA GLAR+MTIIV EVFGEFGLTVSEKKTETLLMR  +  +       PL IEAAGQ YAQ T F+YLGGL+ EHGDLTRE N+R+  A  C+RRYG EL+DRP+APFRLKIRLL+AE M+ALLYGCMTW+P   HY+ L SIH RLL
Sbjct:  136 PLDRVQRAVWGMLYADDAGVVSRSAEGLARMMTIIV-EVFGEFGLTVSEKKTETLLMRKGQADTSQPAPPPPLTIEAAGQKYAQKTEFRYLGGLVNEHGDLTRENNYRSRGAWACLRRYGRELFDRPQAPFRLKIRLLQAEAMDALLYGCMTWSPLSGHYQTLRSIHHRLL 305          
BLAST of mRNA_L-elsbetiae_contig7377.16250.1 vs. uniprot
Match: A0A6H5JLT1_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLT1_9PHAE)

HSP 1 Score: 245 bits (625), Expect = 9.890e-76
Identity = 129/173 (74.57%), Postives = 143/173 (82.66%), Query Frame = 0
Query:    2 PLDQVRRAVWGMLYADDAGVVSRSANGLARVMTIIVVEVFGEFGLTVSEKKTETLLMRVKEKQSPPSXXXXP--LVIEAAGQTYAQTTVFKYLGGLITEHGDLTREINFRNGAASGCMRRYGPELYDRPRAPFRLKIRLLRAEPMEALLYGCMTWAPRIEHYRLLTSIHLRLL 172
            PLD+VRRAVWGMLYADDAGVVSRSA GLAR+MTIIV EVFGEFGLTVSEKKTETLLMR K+K +  S    P  L IEAAGQ YAQTT F+Y GGL+ +HGDLTREIN R+  A  C+RRYG EL+DRP+APFRLKIRLL+AE MEALLYGCMTW+P   HY+ L SIH RLL
Sbjct:  253 PLDRVRRAVWGMLYADDAGVVSRSAEGLARMMTIIV-EVFGEFGLTVSEKKTETLLMRAKDKPATTSQPASPPPLTIEAAGQEYAQTTEFQYPGGLVNDHGDLTREINCRSRGAWACLRRYGRELFDRPKAPFRLKIRLLQAEAMEALLYGCMTWSPLSGHYQTLRSIHHRLL 424          
BLAST of mRNA_L-elsbetiae_contig7377.16250.1 vs. uniprot
Match: A0A6H5K7X5_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7X5_9PHAE)

HSP 1 Score: 237 bits (605), Expect = 4.990e-74
Identity = 126/170 (74.12%), Postives = 145/170 (85.29%), Query Frame = 0
Query:    3 LDQVRRAVWGMLYADDAGVVSRSANGLARVMTIIVVEVFGEFGLTVSEKKTETLLMRVKEKQSPPSXXXXPLVIEAAGQTYAQTTVFKYLGGLITEHGDLTREINFRNGAASGCMRRYGPELYDRPRAPFRLKIRLLRAEPMEALLYGCMTWAPRIEHYRLLTSIHLRLL 172
            LD+VRRAVWGMLYADDAG+VS+SA+GLAR+MTIIV EVF EFGLTVSE+KTETL+MRVKE+Q    XXXX L IEAAGQ YAQTT F+YLGGL+ E GDLTREIN R+ AA  C++RY  EL+DRP APFRLK RLL+AE +EALLYGCMTW+PR +HYRLL + H RLL
Sbjct:  247 LDRVRRAVWGMLYADDAGIVSKSADGLARMMTIIV-EVFREFGLTVSERKTETLVMRVKERQRXXXXXXXVLTIEAAGQRYAQTTEFRYLGGLVNEQGDLTREINHRSKAAWACIKRYATELFDRPGAPFRLKARLLQAEAVEALLYGCMTWSPRRDHYRLLQTTHHRLL 415          
BLAST of mRNA_L-elsbetiae_contig7377.16250.1 vs. uniprot
Match: A0A6H5KS82_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KS82_9PHAE)

HSP 1 Score: 244 bits (622), Expect = 8.530e-74
Identity = 128/173 (73.99%), Postives = 143/173 (82.66%), Query Frame = 0
Query:    2 PLDQVRRAVWGMLYADDAGVVSRSANGLARVMTIIVVEVFGEFGLTVSEKKTETLLMRVKEKQSPPSXXXXP--LVIEAAGQTYAQTTVFKYLGGLITEHGDLTREINFRNGAASGCMRRYGPELYDRPRAPFRLKIRLLRAEPMEALLYGCMTWAPRIEHYRLLTSIHLRLL 172
            PLD+VRRAVWGM YADDAGVVSRSA GLAR+MTIIV EVFGEFGLTVSEKKTETLLMR K+K +  S    P  L I+AAGQ YAQTT F+YLGGL+ EHGDLTREIN+R+  A  C+RRYG EL+DRP+AP RLKIRLL+AE MEALLYGCMTW+P   HY+ L SIH RLL
Sbjct:  342 PLDRVRRAVWGMSYADDAGVVSRSAEGLARMMTIIV-EVFGEFGLTVSEKKTETLLMRAKDKPTTISQTAPPPPLTIKAAGQKYAQTTEFRYLGGLVNEHGDLTREINYRSRGAWACLRRYGRELFDRPQAPSRLKIRLLQAEAMEALLYGCMTWSPLSRHYQTLRSIHHRLL 513          
BLAST of mRNA_L-elsbetiae_contig7377.16250.1 vs. uniprot
Match: A0A6H5K038_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K038_9PHAE)

HSP 1 Score: 229 bits (583), Expect = 9.110e-74
Identity = 121/162 (74.69%), Postives = 134/162 (82.72%), Query Frame = 0
Query:   13 MLYADDAGVVSRSANGLARVMTIIVVEVFGEFGLTVSEKKTETLLMRVKEKQSPPSXXXXP--LVIEAAGQTYAQTTVFKYLGGLITEHGDLTREINFRNGAASGCMRRYGPELYDRPRAPFRLKIRLLRAEPMEALLYGCMTWAPRIEHYRLLTSIHLRLL 172
            MLYADDAGVVSRSA GLAR+MTIIV EVFGEFGLTVSEKKTETLLMR K+K +  S    P  L IEAAGQ YAQTT F+YLGGL+ EHGDLTREIN+R+  A  C+RRYG EL+DRP+APFRLKIRLL+AE MEALLYGCMTW+P   HY+ L SIH RLL
Sbjct:    1 MLYADDAGVVSRSAEGLARMMTIIV-EVFGEFGLTVSEKKTETLLMRAKDKPTTTSQPAPPPPLTIEAAGQKYAQTTEFRYLGGLVNEHGDLTREINYRSRGAWACLRRYGRELFDRPQAPFRLKIRLLQAEAMEALLYGCMTWSPLSGHYQTLRSIHHRLL 161          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig7377.16250.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KBT2_9PHAE4.250e-7976.30Reverse transcriptase domain-containing protein (F... [more]
A0A6H5L6A1_9PHAE6.680e-7874.57Reverse transcriptase domain-containing protein (F... [more]
A0A6H5K8C3_9PHAE7.480e-7775.72Reverse transcriptase domain-containing protein n=... [more]
A0A6H5KZ04_9PHAE8.150e-7772.83Reverse transcriptase domain-containing protein (F... [more]
A0A6H5K6C6_9PHAE1.090e-7675.15Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JBT6_9PHAE5.880e-7672.51Reverse transcriptase domain-containing protein n=... [more]
A0A6H5JLT1_9PHAE9.890e-7674.57Reverse transcriptase domain-containing protein (F... [more]
A0A6H5K7X5_9PHAE4.990e-7474.12Reverse transcriptase domain-containing protein n=... [more]
A0A6H5KS82_9PHAE8.530e-7473.99Reverse transcriptase domain-containing protein (F... [more]
A0A6H5K038_9PHAE9.110e-7474.69Reverse transcriptase domain-containing protein (F... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR47027:SF5coord: 12..172
NoneNo IPR availablePANTHERPTHR47027FAMILY NOT NAMEDcoord: 12..172
IPR000477Reverse transcriptase domainPROSITEPS50878RT_POLcoord: 1..96
score: 8.876

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig7377contigL-elsbetiae_contig7377:9375..9890 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig7377.16250.1mRNA_L-elsbetiae_contig7377.16250.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig7377 9121..9890 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig7377.16250.1 ID=prot_L-elsbetiae_contig7377.16250.1|Name=mRNA_L-elsbetiae_contig7377.16250.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=172bp
MPLDQVRRAVWGMLYADDAGVVSRSANGLARVMTIIVVEVFGEFGLTVSE
KKTETLLMRVKEKQSPPSPPSPPLVIEAAGQTYAQTTVFKYLGGLITEHG
DLTREINFRNGAASGCMRRYGPELYDRPRAPFRLKIRLLRAEPMEALLYG
CMTWAPRIEHYRLLTSIHLRLL
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000477RT_dom