prot_L-elsbetiae_contig7310.16184.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig7310.16184.1
Unique Nameprot_L-elsbetiae_contig7310.16184.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length451
Homology
BLAST of mRNA_L-elsbetiae_contig7310.16184.1 vs. uniprot
Match: A0A6H5K8R4_9PHAE (E3 ubiquitin-protein ligase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8R4_9PHAE)

HSP 1 Score: 367 bits (942), Expect = 5.340e-110
Identity = 272/459 (59.26%), Postives = 319/459 (69.50%), Query Frame = 0
Query:    4 VLSPEEAAWFRRGIDVPMQAMGSIEAGLKESNRARLEVFQQRQRDALRKAGETARKCFRERGA--------SIGQRLSPESASALETVWESDTIWPLMQTPLLAWDLTTLLVGGVTMARSWSARVGVARTACLARLCQTLLQPELCLRGPGGCSAATAAXXXXXXXXXXXXXXXXXDRPVSSKGTTAAAVTXXAAALESLRGMLAEVTGTPVSAMAPVGKELVSMCYSSWLPFLRCSALILTASCSTDNTSDGDKLSRVA---GGEKEQWRRRLVSAYGSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGDAQPDCAAAAVEELCSALGIPCLQGVAASGPAVSMIRAWGRQFAGAFGPAQPGAGVCGIGSETLSPPFVEECLRRAPPRGVLAADMGGGRGGGYXXXXXXXXVDGIG 451
            +LSPEEA W RR +++PMQAMG+ +  LKE+++ RLE F+ RQ  AL++  + AR+CF E  A        S  +RLSPESASALE+VWESD +WPLMQ P+L+WDLTTL+VGGV+MARSWS R GVAR  CLARLCQ LLQPELCLRGPGG       XXXXXXXXXXXXXXX   +               A+ALE LRG+LAE TGTPVS +APVGKELVSMCYSSW PFLRCSAL+L ASCSTDN+++G   +R +   GG +++WR+RL SAYGSS                   XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                 +C AA V+ELCSALG+P  Q V +S  A+ M+RAWGRQ+  AFGPAQP AGVC IGSE+L+P  +EECLR+AP R VLAAD GGG   G          DG+G
Sbjct: 1886 ILSPEEATWMRRALELPMQAMGNTQPDLKEADKGRLESFRLRQAYALKRPRQAARECFEEAAAGGATSKTSSWSERLSPESASALESVWESDAVWPLMQIPILSWDLTTLVVGGVSMARSWSNRAGVARAVCLARLCQALLQPELCLRGPGGSXXXXXXXXXXXXXXXXXXXXXRLSKXXXXX----------ASALELLRGVLAEATGTPVSRLAPVGKELVSMCYSSWAPFLRCSALLLVASCSTDNSNEGSDANRGSTSGGGVEDEWRQRLASAYGSSARLSFTTTGYDSNGHTRKRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGV---------------ECLAA-VQELCSALGVPSPQAVVSSSLAMGMVRAWGRQYKEAFGPAQPEAGVCRIGSESLNPSLMEECLRQAPSRTVLAADAGGGSNFGDDEDGGWGNGDGLG 2318          
BLAST of mRNA_L-elsbetiae_contig7310.16184.1 vs. uniprot
Match: D7G3D4_ECTSI (E3 ubiquitin-protein ligase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3D4_ECTSI)

HSP 1 Score: 348 bits (892), Expect = 2.060e-103
Identity = 232/441 (52.61%), Postives = 265/441 (60.09%), Query Frame = 0
Query:    4 VLSPEEAAWFRRGIDVPMQAMGSIEAGLKESNRARLEVFQQRQRDALRKAGETARKCFRERGA--------SIGQRLSPESASALETVWESDTIWPLMQTPLLAWDLTTLLVGGVTMARSWSARVGVARTACLARLCQTLLQPELCLRGPGGCSAATAAXXXXXXXXXXXXXXXXXDRPVSSKGTTAAAVTXXAAALESLRGMLAEVTGTPVSAMAPVGKELVSMCYSSWLPFLRCSALILTASCSTDNT---SDGDKLSRVAGGEKEQWRRRLVSAYGSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGDAQPDCAAAAVEELCSALGIPCLQGVAASGPAVSMIRAWGRQFAGAFGPAQPGAGVCGIGSETLSPPFVEECLRRAPPRGVLAADMGGG 433
            VLSPEEA W RRG+++PMQAMG+ +  LKE+++ RLE F+ RQ  AL++  + AR+CF E  A        S  +RLSPESASALE+VWE D +WPLMQTPLL+WDLTTLLVG V+MARSWS R GVAR  CLARLCQ LLQPELCLRGPGG       XXXXXXXXXXXXXXXXX  P  SKG       XX +ALE LRG+LAE TGTPVS +APVGKELVSMCYSSW PFLRCSAL+L ASCSTDN+   SD +  S  +GG                                                                                                AVEELCSALG+P  Q V +SGPA+ M+RAWGRQ+  AFG AQP AGVC IGSE+L+P FVEECLR+AP R VLAAD GGG
Sbjct: 1012 VLSPEEATWIRRGLELPMQAMGNTQPDLKEADKGRLESFRLRQAYALKRPRQAARECFEEAAAGGLASKTSSWSERLSPESASALESVWEPDAVWPLMQTPLLSWDLTTLLVGSVSMARSWSNRAGVARAVCLARLCQALLQPELCLRGPGG--XXXXXXXXXXXXXXXXXXXXXXXXPGLSKGXXX--XXXXXSALELLRGVLAEATGTPVSRLAPVGKELVSMCYSSWAPFLRCSALLLVASCSTDNSNEASDANNSSSASGG------------------------------------------------------------------------------------------------AVEELCSALGVPSPQAVVSSGPAMGMVRAWGRQYREAFGSAQPTAGVCRIGSESLNPSFVEECLRQAPSRRVLAADAGGG 1352          
BLAST of mRNA_L-elsbetiae_contig7310.16184.1 vs. uniprot
Match: A0A836CB31_9STRA (E3 ubiquitin-protein ligase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CB31_9STRA)

HSP 1 Score: 85.1 bits (209), Expect = 9.680e-14
Identity = 79/170 (46.47%), Postives = 94/170 (55.29%), Query Frame = 0
Query:   90 WPLMQTPLLAWDLTTLLVGGVTMARSWSARVGVARTACLARLCQTLLQPELCLRGPGGCSAATAAXXXXXXXXXXXXXXXXXDRPVSSKGTTAAAVTXXAAALESLRGMLAEVTGTPVSAMAPVGKELVSMCYSSWLPFLRCSALILTASCSTDNTSDGDKLS---RVAG 256
            WP++Q PLLAWDL+TL     T+  S   R    R  CLARL Q  +QPE CL G     AATA XXXXXXXXXXXXXXXXX                   ALE+ RG LAE  G  V+A AP G  L+    ++WLPFLR + L+LT      + +D   LS   R+AG
Sbjct: 1869 WPVLQVPLLAWDLSTLAAALATLVHSAEQRRAAVRAVCLARLAQLCVQPEFCLLGT---VAATAXXXXXXXXXXXXXXXXXXXXXXXXX------------ALEAQRGALAEEIGLAVAATAPRGAALLHAALAAWLPFLRYAVLLLTVVEGEVDEADATALSTDARLAG 2023          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig7310.16184.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5K8R4_9PHAE5.340e-11059.26E3 ubiquitin-protein ligase n=1 Tax=Ectocarpus sp.... [more]
D7G3D4_ECTSI2.060e-10352.61E3 ubiquitin-protein ligase n=1 Tax=Ectocarpus sil... [more]
A0A836CB31_9STRA9.680e-1446.47E3 ubiquitin-protein ligase n=1 Tax=Tribonema minu... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig7310contigL-elsbetiae_contig7310:798..7328 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig7310.16184.1mRNA_L-elsbetiae_contig7310.16184.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig7310 798..7328 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig7310.16184.1 ID=prot_L-elsbetiae_contig7310.16184.1|Name=mRNA_L-elsbetiae_contig7310.16184.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=451bp
QDAVLSPEEAAWFRRGIDVPMQAMGSIEAGLKESNRARLEVFQQRQRDAL
RKAGETARKCFRERGASIGQRLSPESASALETVWESDTIWPLMQTPLLAW
DLTTLLVGGVTMARSWSARVGVARTACLARLCQTLLQPELCLRGPGGCSA
ATAAAKEGEKGSGGGGRGGSGDRPVSSKGTTAAAVTTTAAALESLRGMLA
EVTGTPVSAMAPVGKELVSMCYSSWLPFLRCSALILTASCSTDNTSDGDK
LSRVAGGEKEQWRRRLVSAYGSSASVIRGGGGGGAGNFEPNNHTRKRRTR
STSTPPTPAAAASGNSNLTTDRQDNGGGVGDGGGGEGGSEDDEGDAQPDC
AAAAVEELCSALGIPCLQGVAASGPAVSMIRAWGRQFAGAFGPAQPGAGV
CGIGSETLSPPFVEECLRRAPPRGVLAADMGGGRGGGYGDGGGWGDVDGI
G
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