prot_L-elsbetiae_contig7305.16178.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig7305.16178.1
Unique Nameprot_L-elsbetiae_contig7305.16178.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length322
Homology
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BLAST of mRNA_L-elsbetiae_contig7305.16178.1 vs. uniprot
Match: A0A6H5KXT8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXT8_9PHAE)

HSP 1 Score: 401 bits (1030), Expect = 6.970e-128
Identity = 227/314 (72.29%), Postives = 248/314 (78.98%), Query Frame = 0 
Query:    1 MDWSGPVGIGHIGTFPICIRPMPGGAALPADSHATSPMSGMSRGSSPSTSSHRAGSSGGTTPVSSPLRPEAEQPMMMPVVGANRILGVEVNIGRHN-GGSDDSELAVDGKG-APGGRQSFRSSAVQVIFQEEEWGTGDRFPTYRLENHTSSRMFYGQASVPGPGDALPPGRSCLFGWDQPCPAEERAQGVLNLSLVLAPEPLSSPEGRRQARTLNIRRLGERVWLTTSRGRVEVVVEPDGPSKLVRMYNARALFSIMPSPPSTQPRPPQPYLSASGIERSRTSPPSSSRSS--SEITNISGPPRPARRLVGREG 310
            MDWSGPVGIG+IGTFPICIRP PGGAALP DSH  +P    SR SSPS+   RAGSSG +TPVSSP R E E    MP+VGANR+LGVEVNIGRH+ GG D SE  VDGK  +  G Q FRSSAVQVIFQEE WGTGDRFPTYRLENHT+SR+FYGQASVPGPGDALPPGRSCLFGWD PCP EER QGVLNLSLVLA EPLSSPEG+RQA+TLNIR+LGER  L TSRGRVEVVVEPDGPSKLVRMY ++A FSIM  P  T+ RPPQP  S+  +ER+RTSP + S S   +    I GPPRP RR V   G
Sbjct:   49 MDWSGPVGIGNIGTFPICIRPKPGGAALPVDSHVATPPE--SRASSPSS---RAGSSGWSTPVSSPHRGEVEP---MPMVGANRVLGVEVNIGRHSDGGGDGSERPVDGKDESSSGGQGFRSSAVQVIFQEEAWGTGDRFPTYRLENHTNSRIFYGQASVPGPGDALPPGRSCLFGWDHPCPVEERVQGVLNLSLVLAAEPLSSPEGKRQAKTLNIRKLGERTSLVTSRGRVEVVVEPDGPSKLVRMYKSKA-FSIMSPPTRTRARPPQPVQSS--LERARTSPRAHSTSGGGNSGAEIVGPPRPLRRSVDLRG 351
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BLAST of mRNA_L-elsbetiae_contig7305.16178.1 vs. uniprot
Match: D7FMF6_ECTSI (SHR-BD domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMF6_ECTSI)

HSP 1 Score: 403 bits (1036), Expect = 2.130e-127
Identity = 228/315 (72.38%), Postives = 248/315 (78.73%), Query Frame = 0 
Query:    1 MDWSGPVGIGHIGTFPICIRPMPGGAALPADSHATSPMSGMSRGSSPSTSSHRAGSSGGTTPVSSPLRPEAEQPMMMPVVGANRILGVEVNIGRHN-GGSDDSELAVDGKGAP-GGRQSFRSSAVQVIFQEEEWGTGDRFPTYRLENHTSSRMFYGQASVPGPGDALPPGRSCLFGWDQPCPAEERAQGVLNLSLVLAPEPLSSPEGRRQARTLNIRRLGERVWLTTSRGRVEVVVEPDGPSKLVRMYNARALFSIMPSPPSTQPRPPQPYLSASGIERSRTSPPSSSRSS---SEITNISGPPRPARRLVGREG 310
            MDWSGPVGIG+IGTFPICIRP PGGAALP DSH  +P    SR SSPS+   RAGSSG +TPVSSP R   E    MP+VGANR+LGVEVNIGRH+ GG D SE  VDGK  P GG Q FRSSAVQVIFQEE WGTGDRFPTYRLENHT+SR+FYGQASVPGPGDALPPGRSCLFGWD PCP EER QGVLNLSLVLA EPLSSPEG+RQA+TLNIR+LGER  L TSRGRVEVVVEPDGPSKLVRMY ++A FSIM  P  T+ RPPQP  S   +ER+RTSP + S S+   +    I GPPRP RR V   G
Sbjct:  981 MDWSGPVGIGNIGTFPICIRPKPGGAALPVDSHVATPPE--SRASSPSS---RAGSSGWSTPVSSPHRGGVEP---MPMVGANRVLGVEVNIGRHSDGGGDGSERPVDGKDGPSGGGQGFRSSAVQVIFQEEAWGTGDRFPTYRLENHTNSRIFYGQASVPGPGDALPPGRSCLFGWDHPCPVEERVQGVLNLSLVLAAEPLSSPEGKRQAKTLNIRKLGERTSLVTSRGRVEVVVEPDGPSKLVRMYKSKA-FSIMSPPTRTRARPPQPVQST--VERARTSPRAHSASAGGGNSGAEIVGPPRPLRRSVDLRG 1284
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig7305.16178.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KXT8_9PHAE6.970e-12872.29Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FMF6_ECTSI2.130e-12772.38SHR-BD domain-containing protein n=1 Tax=Ectocarpu... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig7305contigL-elsbetiae_contig7305:2216..9668 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig7305.16178.1mRNA_L-elsbetiae_contig7305.16178.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig7305 2185..9668 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig7305.16178.1 ID=prot_L-elsbetiae_contig7305.16178.1|Name=mRNA_L-elsbetiae_contig7305.16178.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=322bp
MDWSGPVGIGHIGTFPICIRPMPGGAALPADSHATSPMSGMSRGSSPSTS
SHRAGSSGGTTPVSSPLRPEAEQPMMMPVVGANRILGVEVNIGRHNGGSD
DSELAVDGKGAPGGRQSFRSSAVQVIFQEEEWGTGDRFPTYRLENHTSSR
MFYGQASVPGPGDALPPGRSCLFGWDQPCPAEERAQGVLNLSLVLAPEPL
SSPEGRRQARTLNIRRLGERVWLTTSRGRVEVVVEPDGPSKLVRMYNARA
LFSIMPSPPSTQPRPPQPYLSASGIERSRTSPPSSSRSSSEITNISGPPR
PARRLVGREGTAAALAAPSAR*
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