prot_L-elsbetiae_contig7292.16161.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig7292.16161.1
Unique Nameprot_L-elsbetiae_contig7292.16161.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length239
Homology
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BLAST of mRNA_L-elsbetiae_contig7292.16161.1 vs. uniprot
Match: D7FH19_ECTSI (NB-ARC and TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FH19_ECTSI)

HSP 1 Score: 348 bits (892), Expect = 1.570e-108
Identity = 180/239 (75.31%), Postives = 201/239 (84.10%), Query Frame = 0 
Query:    1 QVLAEAARRIEAEAPWYEALGLRSEEAADGGGDLAVETVLAFNVASGLIDAANETVLAPVFVVLKGLLGAVQGAAAAREEIVGLTRYCVGISRCLLEAAKVEDMPRSIVATLGEFKGEMAAVGRFVQTYGTRSSGCCWRRMAFNSHDLDAAAGHKQKLKDLLDSVLAGLAVEANLGVNDIKVIVTAGDPPRLGDMAPVPREAPALTETYVHRIAMLEAVVADLTDPQRSASATHCLLGM 239
            + LAEAARR+EAE PW+E LGLR ++ ADGGGDL VET+LAFNVASGLI+AANETVLAPVFVVLKGLLGAVQGAAAAREEIV L RYCV +SRCLL+AAK + MP +I +TL EFKGEM AVGRFVQTYGTRSSGCCWRRM  N+HD D AAGHK+KLKDLLD+VLAGLA + N G+N IK ++ A DPP LG +A +PREAP L  TYV R AMLE VV DLT P RSASATHCLLGM
Sbjct:   38 EALAEAARRMEAETPWFEKLGLRYQDVADGGGDLTVETILAFNVASGLINAANETVLAPVFVVLKGLLGAVQGAAAAREEIVELARYCVAMSRCLLDAAKADVMPETIKSTLEEFKGEMEAVGRFVQTYGTRSSGCCWRRMVLNAHDRDTAAGHKRKLKDLLDAVLAGLAAQTNQGLNQIKGMILARDPPSLGALAEIPREAPVLPTTYVQRTAMLEEVVDDLTHPHRSASATHCLLGM 276
[Close]
BLAST of mRNA_L-elsbetiae_contig7292.16161.1 vs. uniprot
Match: A0A6H5L982_9PHAE (NB-ARC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L982_9PHAE)

HSP 1 Score: 67.0 bits (162), Expect = 3.440e-9
Identity = 52/196 (26.53%), Postives = 88/196 (44.90%), Query Frame = 0 
Query:   47 GLIDAANETVLAPVFVVLKGLLGAVQGAAAAREEIVGLTRYCVGISRCLLEAAKVEDMPRSIVATLGEFKGEMAAVGRFVQTYGTR---SSGCCWRRMAFNSHDLDAAAGHKQKLKDLLDSVLAGLAVEANLGVNDIKVIVTAGDPPRLGDMAPVPREAPALTETYVHRIAMLEAVVADLTDPQRSASATHCLLGM 239
            GL++ A+   L P+    KGL+ A +GAA A E +  L  +C  ++  LL+  K  D    ++  L +F      + +  +   TR   ++  C+ R      D DA      KL+ + + +         + +  +     A  PP+ G+MA +P  APAL   +V R  ++EAV  DL   +R+      L G+
Sbjct:   51 GLLNVASVGPLMPICEAFKGLIQAAEGAAEADENLRELIAWCAFLTDVLLQHGKEVDALAPVMKPLRDFVSTTNQLAKRAKRLATRRKCAALLCFARDGKQIQDFDA------KLRSIWNDI-------QGVTILWVSAEFRAARPPKTGEMAKIPHNAPALPPAFVERSGLVEAVAQDLAAAERATDTADVLRGI 233
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig7292.16161.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FH19_ECTSI1.570e-10875.31NB-ARC and TPR repeat-containing protein n=1 Tax=E... [more]
A0A6H5L982_9PHAE3.440e-926.53NB-ARC domain-containing protein n=1 Tax=Ectocarpu... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig7292contigL-elsbetiae_contig7292:6663..7379 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig7292.16161.1mRNA_L-elsbetiae_contig7292.16161.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig7292 6663..7380 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig7292.16161.1 ID=prot_L-elsbetiae_contig7292.16161.1|Name=mRNA_L-elsbetiae_contig7292.16161.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=239bp
QVLAEAARRIEAEAPWYEALGLRSEEAADGGGDLAVETVLAFNVASGLID
AANETVLAPVFVVLKGLLGAVQGAAAAREEIVGLTRYCVGISRCLLEAAK
VEDMPRSIVATLGEFKGEMAAVGRFVQTYGTRSSGCCWRRMAFNSHDLDA
AAGHKQKLKDLLDSVLAGLAVEANLGVNDIKVIVTAGDPPRLGDMAPVPR
EAPALTETYVHRIAMLEAVVADLTDPQRSASATHCLLGM
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