prot_L-elsbetiae_contig7283.16150.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_L-elsbetiae_contig7283.16150.1
Unique Name	prot_L-elsbetiae_contig7283.16150.1
Type	polypeptide
Organism	Laminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length	160

Homology

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BLAST of mRNA_L-elsbetiae_contig7283.16150.1 vs. uniprot
Match: D8LQ80_ECTSI (Histone H1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQ80_ECTSI)

HSP 1 Score: 118 bits (296), Expect = 2.490e-31
Identity = 62/68 (91.18%), Postives = 65/68 (95.59%), Query Frame = 0

Query:    1 MVFDAIKTLKERSGSSIQAIKKSITATNPSLNFTPHQMRSALKKGVESGKFIKVKGSYKLSPEAKKPA 68
            MVFDAIKTLKER+GSSIQAIKKSITAT P+LNFTPHQMRSALKKGVESGKFIK+K SYKLS EAKKPA
Sbjct:   11 MVFDAIKTLKERNGSSIQAIKKSITATYPTLNFTPHQMRSALKKGVESGKFIKMKASYKLSAEAKKPA 78

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BLAST of mRNA_L-elsbetiae_contig7283.16150.1 vs. uniprot
Match: A0A6H5KST0_9PHAE (H15 domain-containing protein n=6 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KST0_9PHAE)

HSP 1 Score: 118 bits (295), Expect = 5.770e-31
Identity = 61/68 (89.71%), Postives = 65/68 (95.59%), Query Frame = 0

Query:    1 MVFDAIKTLKERSGSSIQAIKKSITATNPSLNFTPHQMRSALKKGVESGKFIKVKGSYKLSPEAKKPA 68
            MVFDAIKTLKER+GSSIQAIKKSITAT P+LNFTPHQMRSALKKGVESGKF+K+K SYKLS EAKKPA
Sbjct:    1 MVFDAIKTLKERNGSSIQAIKKSITATYPTLNFTPHQMRSALKKGVESGKFVKMKASYKLSAEAKKPA 68

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BLAST of mRNA_L-elsbetiae_contig7283.16150.1 vs. uniprot
Match: A0A6H5KCU1_9PHAE (H15 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCU1_9PHAE)

HSP 1 Score: 120 bits (300), Expect = 1.560e-30
Identity = 62/68 (91.18%), Postives = 65/68 (95.59%), Query Frame = 0

Query:    1 MVFDAIKTLKERSGSSIQAIKKSITATNPSLNFTPHQMRSALKKGVESGKFIKVKGSYKLSPEAKKPA 68
            MVFDAIKTLKER+GSSIQAIKKSITAT P+LNFTPHQMR ALKKGVESGKFIK+K SYKLSPEAKKPA
Sbjct:  104 MVFDAIKTLKERNGSSIQAIKKSITATYPTLNFTPHQMRGALKKGVESGKFIKMKASYKLSPEAKKPA 171

[Close]

BLAST of mRNA_L-elsbetiae_contig7283.16150.1 vs. uniprot
Match: D8LQ75_ECTSI (H15 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQ75_ECTSI)

HSP 1 Score: 115 bits (288), Expect = 1.150e-29
Identity = 60/67 (89.55%), Postives = 64/67 (95.52%), Query Frame = 0

Query:    1 MVFDAIKTLKERSGSSIQAIKKSITATNPSLNFTPHQMRSALKKGVESGKFIKVKGSYKLSPEAKKP 67
            MVFDAIK+LKER+GSSIQAIKKSITAT P+LNFTPHQMRSALKKGVE+GKFIKVK SYKLS EAKKP
Sbjct:    1 MVFDAIKSLKERNGSSIQAIKKSITATYPALNFTPHQMRSALKKGVETGKFIKVKSSYKLSAEAKKP 67

[Close]

BLAST of mRNA_L-elsbetiae_contig7283.16150.1 vs. uniprot
Match: A0A6H5JHR9_9PHAE (H15 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHR9_9PHAE)

HSP 1 Score: 112 bits (280), Expect = 4.610e-29
Identity = 58/68 (85.29%), Postives = 60/68 (88.24%), Query Frame = 0

Query:    1 MVFDAIKTLKERSGSSIQAIKKSITATNPSLNFTPHQMRSALKKGVESGKFIKVKGSYKLSPEAKKPA 68
            MVFDAIK LKER GSS+ A+KK I AT PSLNFTPHQMRSALKKG ESGKFIKVK SYKLSPEAKKPA
Sbjct:    1 MVFDAIKALKERGGSSLPALKKQIMATYPSLNFTPHQMRSALKKGTESGKFIKVKSSYKLSPEAKKPA 68

[Close]

BLAST of mRNA_L-elsbetiae_contig7283.16150.1 vs. uniprot
Match: D7G4I5_ECTSI (H15 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G4I5_ECTSI)

HSP 1 Score: 112 bits (280), Expect = 1.180e-28
Identity = 58/68 (85.29%), Postives = 60/68 (88.24%), Query Frame = 0

Query:    1 MVFDAIKTLKERSGSSIQAIKKSITATNPSLNFTPHQMRSALKKGVESGKFIKVKGSYKLSPEAKKPA 68
            MVFDAIK LKER GSS+ A+KK I AT PSLNFTPHQMRSALKKG ESGKFIKVK SYKLSPEAKKPA
Sbjct:   12 MVFDAIKALKERGGSSLPALKKQIMATYPSLNFTPHQMRSALKKGTESGKFIKVKSSYKLSPEAKKPA 79

[Close]

BLAST of mRNA_L-elsbetiae_contig7283.16150.1 vs. uniprot
Match: A0A6H5K9S6_9PHAE (H15 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9S6_9PHAE)

HSP 1 Score: 97.8 bits (242), Expect = 6.040e-24
Identity = 50/62 (80.65%), Postives = 58/62 (93.55%), Query Frame = 0

Query:    1 MVFDAIKTLKERSGSSIQAIKKSITATNPSLNFTPHQMRSALKKGVESGKFIKVKGSYKLSP 62
            MVFDAIKTLKER+GSSIQA+KKSITAT P+L+FTPHQMRSALKKGVE+GKFIKV+ +  L+P
Sbjct:    1 MVFDAIKTLKERNGSSIQAMKKSITATYPALHFTPHQMRSALKKGVETGKFIKVRHALPLAP 62

[Close]

BLAST of mRNA_L-elsbetiae_contig7283.16150.1 vs. uniprot
Match: D8LMF1_ECTSI (H15 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMF1_ECTSI)

HSP 1 Score: 90.1 bits (222), Expect = 5.950e-20
Identity = 46/63 (73.02%), Postives = 52/63 (82.54%), Query Frame = 0

Query:    5 AIKTLKERSGSSIQAIKKSITATNPSLNFTPHQMRSALKKGVESGKFIKVKGSYKLSPEAKKP 67
            AI  LKER+GSS+ AIKK I AT P+LNF PHQ+R ALKKG E+G FIKVK SYK+SPEAKKP
Sbjct:   11 AILALKERNGSSVPAIKKHIQATYPTLNFLPHQLRGALKKGTETGTFIKVKASYKVSPEAKKP 73

[Close]

BLAST of mRNA_L-elsbetiae_contig7283.16150.1 vs. uniprot
Match: D8LJB8_ECTSI (H15 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJB8_ECTSI)

HSP 1 Score: 89.7 bits (221), Expect = 1.240e-18
Identity = 48/68 (70.59%), Postives = 55/68 (80.88%), Query Frame = 0

Query:    1 MVFDAIKTLKERSGSSIQAIKKSITATNPSLNFTPHQMRSALKKGVESGKFIKVKGSYKLSPEAKKPA 68
            M  +A+K LKER+GSS+ AIKK ITA+ PSL FT H MRSALKKGVESGKFIKVK SYKLS   ++PA
Sbjct:    7 MTIEAVKALKERNGSSLFAIKKHITASYPSLTFTAHFMRSALKKGVESGKFIKVKNSYKLSAYRQEPA 74

[Close]

BLAST of mRNA_L-elsbetiae_contig7283.16150.1 vs. uniprot
Match: A0A6H5JIM8_9PHAE (H15 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIM8_9PHAE)

HSP 1 Score: 84.7 bits (208), Expect = 8.970e-17
Identity = 45/61 (73.77%), Postives = 51/61 (83.61%), Query Frame = 0

Query:    1 MVFDAIKTLKERSGSSIQAIKKSITATNPSLNFTPHQMRSALKKGVESGKFIKVKGSYKLS 61
            M  +A+K LKER+GSS+ AIKK ITA+ PSL FT H +RSALKKGVESGKFIKVK SYKLS
Sbjct:    7 MTVEAVKALKERNGSSLFAIKKHITASYPSLTFTGHFLRSALKKGVESGKFIKVKNSYKLS 67

The following BLAST results are available for this feature:

BLAST of mRNA_L-elsbetiae_contig7283.16150.1 vs. uniprot

BLAST of mRNA_L-elsbetiae_contig7283.16150.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D8LQ80_ECTSI	2.490e-31	91.18	Histone H1 n=1 Tax=Ectocarpus siliculosus TaxID=28...	[more]
A0A6H5KST0_9PHAE	5.770e-31	89.71	H15 domain-containing protein n=6 Tax=Ectocarpus T...	[more]
A0A6H5KCU1_9PHAE	1.560e-30	91.18	H15 domain-containing protein n=1 Tax=Ectocarpus s...	[more]
D8LQ75_ECTSI	1.150e-29	89.55	H15 domain-containing protein n=1 Tax=Ectocarpus s...	[more]
A0A6H5JHR9_9PHAE	4.610e-29	85.29	H15 domain-containing protein n=1 Tax=Ectocarpus s...	[more]
D7G4I5_ECTSI	1.180e-28	85.29	H15 domain-containing protein n=2 Tax=Ectocarpus T...	[more]
A0A6H5K9S6_9PHAE	6.040e-24	80.65	H15 domain-containing protein n=1 Tax=Ectocarpus s...	[more]
D8LMF1_ECTSI	5.950e-20	73.02	H15 domain-containing protein n=1 Tax=Ectocarpus s...	[more]
D8LJB8_ECTSI	1.240e-18	70.59	H15 domain-containing protein n=1 Tax=Ectocarpus s...	[more]
A0A6H5JIM8_9PHAE	8.970e-17	73.77	H15 domain-containing protein n=1 Tax=Ectocarpus s...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005819	Histone H5	PRINTS	PR00624	HISTONEH5	coord: 8..25 score: 50.62 coord: 84..98 score: 40.0 coord: 118..135 score: 43.83 coord: 140..159 score: 22.78
IPR005818	Linker histone H1/H5, domain H15	SMART	SM00526	h15plus2	coord: 1..57 e-value: 2.6E-14 score: 63.5
IPR005818	Linker histone H1/H5, domain H15	PFAM	PF00538	Linker_histone	coord: 1..60 e-value: 2.1E-17 score: 63.2
IPR005818	Linker histone H1/H5, domain H15	PROSITE	PS51504	H15	coord: 1..62 score: 27.599
IPR036388	Winged helix-like DNA-binding domain superfamily	GENE3D	1.10.10.10		coord: 1..74 e-value: 2.9E-16 score: 61.4
None	No IPR available	PANTHER	PTHR11467:SF108	HISTONE H1.1-RELATED	coord: 1..156
None	No IPR available	PANTHER	PTHR11467	HISTONE H1	coord: 1..156
IPR036390	Winged helix DNA-binding domain superfamily	SUPERFAMILY	46785	"Winged helix" DNA-binding domain	coord: 1..74

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
L-elsbetiae_contig7283	contig	L-elsbetiae_contig7283:862..1963 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW15	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_L-elsbetiae_contig7283.16150.1	mRNA_L-elsbetiae_contig7283.16150.1	Laminarionema elsbetiae ELsaHSoW15	mRNA	L-elsbetiae_contig7283 862..1963 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_L-elsbetiae_contig7283.16150.1 ID=prot_L-elsbetiae_contig7283.16150.1|Name=mRNA_L-elsbetiae_contig7283.16150.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=160bp
MVFDAIKTLKERSGSSIQAIKKSITATNPSLNFTPHQMRSALKKGVESGK
FIKVKGSYKLSPEAKKPAPKPKKKVVKKVVKKVKKKVVKKIVAKKKPAAK
KASTPKKASTPKKKAAPKKAAPKKTAAIKKTVTKKPATKKAASTPKKKAA
PKKKTAKKA*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR005819	Histone_H5
IPR005818	Histone_H1/H5_H15
IPR036388	WH-like_DNA-bd_sf
IPR036390	WH_DNA-bd_sf