prot_L-elsbetiae_contig7265.16134.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig7265.16134.1
Unique Nameprot_L-elsbetiae_contig7265.16134.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length374
Homology
BLAST of mRNA_L-elsbetiae_contig7265.16134.1 vs. uniprot
Match: D7FLP3_ECTSI (DNA helicase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FLP3_ECTSI)

HSP 1 Score: 322 bits (826), Expect = 4.550e-97
Identity = 232/382 (60.73%), Postives = 262/382 (68.59%), Query Frame = 0
Query:    1 MTVHASKGLEFDTVFVTGCEDGTFPMKDTNDDELDEERRLMYVGMTRAKARLFLSWRKRRMVFGQSWGNTGG-GAKTVDSDRSRFLDDIPSKIVCTIDKTASGSGGGSGVPG--AKNSAYGXXXXXXXXQSF--QRRGTSXXXXXXXXXXXXXXXX-----GRGPSGYXXXXXXXXXXXXXXXXXGAAAAEPDSGDPTMDFLTEVSNRASREALAQKSRAGGAGGGYGXXXXXXXXXDRYDGSGPGXXXXXXXXXXXXXXXXXXXRSYESERSTDARIFMEKRDKAEKASYPVPALRDGGKRMARESGEGVDTSWAAKLVSATLKSPKLPPGVVVGVEVSHPIHGPGQVVALVEGSDGVNVRFTSNGQPFVTRVLGAKLKLL 372
            MTVHASKGLEFDTVFV GCE+GTFPMKDT DDE+DEERRLMYVGMTRAKARLFL+WR++RMVFGQSWG     GA+ +D+DRSRFLDDIP  IV TIDKT              ++  AYGXXXXXXXX        G S    XXXXXXXXXXXX      RG SG                      +EP+S DPTMDF+TE+SN  SR+A A++S  G   G              Y  SG G XXX    XXXXXXXXX   SY SERS DAR+FME+R + E A YPVPAL DGG+R+ARESGEGVDTSWAAKL  A  K+P  P GVVVG +V+HPIHGPG+VVALVEGS+GVNVRF S GQPF+TRVLG+KLKL+
Sbjct:  851 MTVHASKGLEFDTVFVAGCEEGTFPMKDTTDDEMDEERRLMYVGMTRAKARLFLTWRRKRMVFGQSWGKRDKTGAQIMDADRSRFLDDIPRNIVRTIDKTGGXXXXXXXXXXXXSRRGAYGXXXXXXXXXXXXXSEYGASPAYGXXXXXXXXXXXXXRRGTARGRSG---------------------VSEPES-DPTMDFMTELSNDISRQATARRSPGGYVPG--------------YGNSGRGGXXXRAGYXXXXXXXXXGG-SYASERSGDARVFMEQRKRVESAKYPVPALTDGGRRLARESGEGVDTSWAAKLAKAAPKTPGPPRGVVVGAQVTHPIHGPGEVVALVEGSEGVNVRFISQGQPFLTRVLGSKLKLV 1195          
BLAST of mRNA_L-elsbetiae_contig7265.16134.1 vs. uniprot
Match: A0A7S2R0L3_9STRA (DNA helicase (Fragment) n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2R0L3_9STRA)

HSP 1 Score: 95.1 bits (235), Expect = 6.670e-19
Identity = 52/96 (54.17%), Postives = 62/96 (64.58%), Query Frame = 0
Query:    1 MTVHASKGLEFDTVFVTGCEDGTFP-----MKDTNDDELDEERRLMYVGMTRAKARLFLSWRKRRMVFGQSWGNTGGGAKTVDSDRSRFLDDIPSK 91
            MT+HASKG+EFD VF+ G E+GTFP     M+     ELDEERRL YV MTRAK  L L+WR+  M F       G G K ++ DRSRFLD + SK
Sbjct:   38 MTIHASKGMEFDAVFLVGNEEGTFPTQRSIMEGEGSIELDEERRLCYVAMTRAKTHLILTWRREVMTF------FGQGVKVINPDRSRFLDSLVSK 127          
BLAST of mRNA_L-elsbetiae_contig7265.16134.1 vs. uniprot
Match: A0A1Y0ET70_9BURK (DNA helicase n=2 Tax=Comamonas serinivorans TaxID=1082851 RepID=A0A1Y0ET70_9BURK)

HSP 1 Score: 96.7 bits (239), Expect = 4.810e-18
Identity = 60/133 (45.11%), Postives = 77/133 (57.89%), Query Frame = 0
Query:    1 MTVHASKGLEFDTVFVTGCEDGTFPMKDTNDDE--LDEERRLMYVGMTRAKARLFLSWRKRRMVFGQSWGNTGGGAKTVDSDRSRFLDDIPSKIVCTIDKTASGSGGGSGVPGAKNSAYGXXXXXXXXQSFQR 131
            MTVHASKGLEFD VF+TG E+G FP +++  D   L+EERRLMYV +TRA+ RL+LS  + R++ GQS  N           RSRFLD++PS+ V  +   + G G G G   A    YG          F R
Sbjct:  628 MTVHASKGLEFDVVFITGLEEGLFPHENSAADTAGLEEERRLMYVAITRARQRLYLSHTQTRLLHGQSRYNF----------RSRFLDEVPSECVQWLTPKSGGFGSGVGASLAHGGQYGRMPAWSKDSGFGR 750          
BLAST of mRNA_L-elsbetiae_contig7265.16134.1 vs. uniprot
Match: A0A7C6WRS4_9FIRM (DNA helicase n=1 Tax=Clostridiales bacterium TaxID=1898207 RepID=A0A7C6WRS4_9FIRM)

HSP 1 Score: 95.5 bits (236), Expect = 1.090e-17
Identity = 53/95 (55.79%), Postives = 64/95 (67.37%), Query Frame = 0
Query:    1 MTVHASKGLEFDTVFVTGCEDGTFPMKDTNDDE--LDEERRLMYVGMTRAKARLFLSWRKRRMVFGQSWGNTGGGAKTVDSDRSRFLDDIPSKIV 93
            MT+H++KGLEFD VFV G E+G FP   + DDE  L EERRL YVGMTRAK  L LSW KRR +F Q   N          DRSRFLD+IP++++
Sbjct:  542 MTLHSAKGLEFDAVFVAGLEEGLFPSSRSRDDEDRLQEERRLCYVGMTRAKKYLCLSWAKRRSLFNQISHN----------DRSRFLDEIPARLM 626          
BLAST of mRNA_L-elsbetiae_contig7265.16134.1 vs. uniprot
Match: A0A519H349_9BURK (DNA helicase (Fragment) n=1 Tax=Rubrivivax sp. TaxID=50259 RepID=A0A519H349_9BURK)

HSP 1 Score: 90.1 bits (222), Expect = 5.320e-17
Identity = 56/120 (46.67%), Postives = 73/120 (60.83%), Query Frame = 0
Query:    1 MTVHASKGLEFDTVFVTGCEDGTFPMKDT-NDDE-LDEERRLMYVGMTRAKARLFLSWRKRRMVFGQSWGNTGGGAKTVDSDRSRFLDDIPSKIVCTIDKTASGSGGGSGVPGAKNSAYG 118
            MTVH++KGLEFD VF+TG E+G FP +++ ND E L+EERRLMYV +TRA+ RL+LS  + RM+ GQ          T    RSRF D++P   +  I     G G G    G +N  YG
Sbjct:   69 MTVHSAKGLEFDGVFITGMEEGLFPHENSMNDYEGLEEERRLMYVAITRARKRLYLSHSQTRMLHGQ----------TRYHIRSRFFDELPEAALKWITPKNRGFGSGFDAAGTRNGGYG 178          
BLAST of mRNA_L-elsbetiae_contig7265.16134.1 vs. uniprot
Match: A0A5C9CTA7_9BURK (DNA helicase n=2 Tax=Comamonadaceae TaxID=80864 RepID=A0A5C9CTA7_9BURK)

HSP 1 Score: 92.8 bits (229), Expect = 8.960e-17
Identity = 60/125 (48.00%), Postives = 78/125 (62.40%), Query Frame = 0
Query:    1 MTVHASKGLEFDTVFVTGCEDGTFPMKD--TNDDELDEERRLMYVGMTRAKARLFLSWRKRRMVFGQSWGNTGGGAKTVDSDRSRFLDDIPSKIVCTIDKTASGSGGGSGVPG-AKNS----AYG 118
            MTVHASKGLEFD VF+TG E+G FP ++  T+ D L+EERRLMYV +TRA+ RL+LS  + RM+ GQ+  N           +SRF +++P + +  I     G GGG G  G A NS    AYG
Sbjct:  610 MTVHASKGLEFDCVFITGMEEGLFPHENSMTDRDSLEEERRLMYVAITRARKRLYLSHSQTRMLHGQTRYNL----------KSRFFEELPEEALKWITPKNQGFGGGFGSAGFASNSGAPRAYG 724          
BLAST of mRNA_L-elsbetiae_contig7265.16134.1 vs. uniprot
Match: A0A7X7TWL0_9BACT (DNA helicase n=1 Tax=Elusimicrobia bacterium TaxID=2030800 RepID=A0A7X7TWL0_9BACT)

HSP 1 Score: 92.4 bits (228), Expect = 1.350e-16
Identity = 47/94 (50.00%), Postives = 67/94 (71.28%), Query Frame = 0
Query:    1 MTVHASKGLEFDTVFVTGCEDGTFPMK--DTNDDELDEERRLMYVGMTRAKARLFLSWRKRRMVFGQSWGNTGGG----AKTVDSDRSRFLDDI 88
            MT+H +KGLEF+TVF+TG E+G FP+   D+++D+++EERRLMYVGMTRAK +LFLSW + R +FG+ + N        +  V   ++R  DDI
Sbjct:  926 MTLHLAKGLEFETVFITGLEEGLFPINAADSSEDDMEEERRLMYVGMTRAKKKLFLSWAQTRRIFGKMYPNMMSRFIIESNVVTYPKNRKYDDI 1019          
BLAST of mRNA_L-elsbetiae_contig7265.16134.1 vs. uniprot
Match: A0A6L6AE75_9ACTN (ATP-dependent DNA helicase n=41 Tax=root TaxID=1 RepID=A0A6L6AE75_9ACTN)

HSP 1 Score: 91.7 bits (226), Expect = 2.080e-16
Identity = 54/109 (49.54%), Postives = 71/109 (65.14%), Query Frame = 0
Query:    1 MTVHASKGLEFDTVFVTGCEDGTFPMKDTNDD--ELDEERRLMYVGMTRAKARLFLSWRKRRMVFGQSWGNTGGGAKTVDSDRSRFLDDIPSKIVCTIDKTASGSGGGS 107
            MT+H +KGLEF TVF+TG EDG FP   T DD  E++EERRL YVG+TRA+ RL++S  + R+ FG    N G          SRFLD+IPS ++   ++T+S S  GS
Sbjct:  574 MTLHTAKGLEFPTVFLTGMEDGIFPHARTLDDPKEIEEERRLAYVGLTRAEKRLYISRAEYRLTFGSPKYNPG----------SRFLDEIPSDLIEWKNETSSKSSSGS 672          
BLAST of mRNA_L-elsbetiae_contig7265.16134.1 vs. uniprot
Match: A0A845DCU9_9PROT (DNA helicase n=1 Tax=Oligoflexia bacterium TaxID=2599941 RepID=A0A845DCU9_9PROT)

HSP 1 Score: 91.3 bits (225), Expect = 2.140e-16
Identity = 49/95 (51.58%), Postives = 63/95 (66.32%), Query Frame = 0
Query:    1 MTVHASKGLEFDTVFVTGCEDGTFPMKDT-NDDELDEERRLMYVGMTRAKARLFLSWRKRRMVFGQSWGNTGGGAKTVDSDRSRFLDDIPSKIVC 94
            MT+H SKGLEFDTVF+TG E+G FP+     D+ L+EERRL YVGMTRAK  L+LS+  +R  FG+   N            SRFL++IP+K +C
Sbjct:  357 MTLHISKGLEFDTVFITGMEEGLFPLSSPLGDNHLEEERRLAYVGMTRAKKNLYLSYAIKRNKFGKKQYNQA----------SRFLEEIPNKFIC 441          
BLAST of mRNA_L-elsbetiae_contig7265.16134.1 vs. uniprot
Match: A0A2H0U8X7_9BACT (DNA helicase (Fragment) n=1 Tax=Candidatus Kaiserbacteria bacterium CG10_big_fil_rev_8_21_14_0_10_59_10 TaxID=1974612 RepID=A0A2H0U8X7_9BACT)

HSP 1 Score: 84.3 bits (207), Expect = 2.600e-16
Identity = 47/94 (50.00%), Postives = 63/94 (67.02%), Query Frame = 0
Query:    1 MTVHASKGLEFDTVFVTGCEDGTFP-MKDTNDDELDEERRLMYVGMTRAKARLFLSWRKRRMVFGQSWGNTGGGAKTVDSDRSRFLDDIPSKIV 93
            MTVHASKGLEFDTVFVTG E G FP +++++D + +EERRL YV +TRAK+ LFL++   RM +G+             +  S FLDDI  ++V
Sbjct:   24 MTVHASKGLEFDTVFVTGLEQGLFPSLRESDDRDPEEERRLFYVALTRAKSHLFLTYAAGRMKYGER----------EYTSPSEFLDDIDQRLV 107          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig7265.16134.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FLP3_ECTSI4.550e-9760.73DNA helicase n=2 Tax=Ectocarpus TaxID=2879 RepID=D... [more]
A0A7S2R0L3_9STRA6.670e-1954.17DNA helicase (Fragment) n=1 Tax=Eucampia antarctic... [more]
A0A1Y0ET70_9BURK4.810e-1845.11DNA helicase n=2 Tax=Comamonas serinivorans TaxID=... [more]
A0A7C6WRS4_9FIRM1.090e-1755.79DNA helicase n=1 Tax=Clostridiales bacterium TaxID... [more]
A0A519H349_9BURK5.320e-1746.67DNA helicase (Fragment) n=1 Tax=Rubrivivax sp. Tax... [more]
A0A5C9CTA7_9BURK8.960e-1748.00DNA helicase n=2 Tax=Comamonadaceae TaxID=80864 Re... [more]
A0A7X7TWL0_9BACT1.350e-1650.00DNA helicase n=1 Tax=Elusimicrobia bacterium TaxID... [more]
A0A6L6AE75_9ACTN2.080e-1649.54ATP-dependent DNA helicase n=41 Tax=root TaxID=1 R... [more]
A0A845DCU9_9PROT2.140e-1651.58DNA helicase n=1 Tax=Oligoflexia bacterium TaxID=2... [more]
A0A2H0U8X7_9BACT2.600e-1650.00DNA helicase (Fragment) n=1 Tax=Candidatus Kaiserb... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR014017UvrD-like DNA helicase, C-terminalPFAMPF13361UvrD_Ccoord: 1..58
e-value: 9.9E-25
score: 87.6
NoneNo IPR availableGENE3D3.40.50.300coord: 1..94
e-value: 3.0E-26
score: 94.6
NoneNo IPR availablePANTHERPTHR11070:SF2ATP-DEPENDENT DNA HELICASE SRS2coord: 1..186
IPR000212DNA helicase, UvrD/REP typePANTHERPTHR11070UVRD / RECB / PCRA DNA HELICASE FAMILY MEMBERcoord: 1..186
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 1..95

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig7265contigL-elsbetiae_contig7265:2316..7824 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig7265.16134.1mRNA_L-elsbetiae_contig7265.16134.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig7265 1240..8313 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig7265.16134.1 ID=prot_L-elsbetiae_contig7265.16134.1|Name=mRNA_L-elsbetiae_contig7265.16134.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=374bp
MTVHASKGLEFDTVFVTGCEDGTFPMKDTNDDELDEERRLMYVGMTRAKA
RLFLSWRKRRMVFGQSWGNTGGGAKTVDSDRSRFLDDIPSKIVCTIDKTA
SGSGGGSGVPGAKNSAYGGGGGGGRSQSFQRRGTSGTVGGSGGGGGGGRG
GGRGPSGYGGGGHGAGRAASKRGHSGAAAAEPDSGDPTMDFLTEVSNRAS
REALAQKSRAGGAGGGYGSGYPGGNGGDRYDGSGPGRGGRGGTGYGGAGS
SGGGGRSYESERSTDARIFMEKRDKAEKASYPVPALRDGGKRMARESGEG
VDTSWAAKLVSATLKSPKLPPGVVVGVEVSHPIHGPGQVVALVEGSDGVN
VRFTSNGQPFVTRVLGAKLKLLG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR014017DNA_helicase_UvrD-like_C
IPR000212DNA_helicase_UvrD/REP
IPR027417P-loop_NTPase