prot_L-elsbetiae_contig7251.16117.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig7251.16117.1
Unique Nameprot_L-elsbetiae_contig7251.16117.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length386
Homology
BLAST of mRNA_L-elsbetiae_contig7251.16117.1 vs. uniprot
Match: D7FMF7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMF7_ECTSI)

HSP 1 Score: 565 bits (1456), Expect = 1.960e-194
Identity = 306/386 (79.27%), Postives = 323/386 (83.68%), Query Frame = 0
Query:    1 AEPSPVRGGXXXXXXXGLSGEVSLKELHVFCRAVRISVVDGGLGEVVLGSLEGMSMSVAATEAEVEVKFKLGSLQIDSHMPGTSFPVLLQPVKPGDLSRGGNKCVRFTLVAAPRVKNVTYIKLASLSVEEFDLRLDEGMVRWAQGLADRVMWTLVADKRVDEMARWPLPEEAFCSPQAGRLSGERLGQSDEDHCSPTGSAGGSASSTRXXXXXXXXXXXXXGTFASRYVYLEVFQVSSVKVRLSLQRAKDSFDNVYVGVKPGQMLLDLMMRMDSAHIKLKSLIVHNATTTRSRLIITAREHYERELKQQAFLMLGSLEAFGNPVGLLRGMGQQGMQDFVKEPVLGLLKSVEDQAPEELMHGMARGAGSLLNHSVGGVANSFSLITG 386
            A PSPV+ G         S E+SL+ELHVFCRAVR+SVVDG  GEVVLGSLEGMSM+VAATEAEVEVKFKLGSLQID+H+PGTSFPVLLQPV+PG    G NKCVRFTLVAAPRVKNV YIKLASL+VEEFDLRLDEGMVRWAQGLADRVMWTLVAD+R DEM +WPLP+EAFCS QAG   G +    + D  S  G  G +                  G FASRYVYLEVFQVSSVKVRLSLQRAKDSFDNVYVGVKPGQMLLDLMMRMDSAHIKLKSLIVHN TTTRSRL +TAREHYERELKQQAFLMLGSLEAFGNPVGL+RGMGQ GMQDFVKEPVLGLLKSVED APEELMHGMARGAGSLLNHSVGGVANS SLITG
Sbjct:   70 ASPSPVQEGGDSAS----SEEISLRELHVFCRAVRVSVVDGDRGEVVLGSLEGMSMNVAATEAEVEVKFKLGSLQIDNHLPGTSFPVLLQPVRPG-YQGGDNKCVRFTLVAAPRVKNVAYIKLASLNVEEFDLRLDEGMVRWAQGLADRVMWTLVADRRADEMDKWPLPQEAFCSSQAGHPGGGKASGENIDGSSVGGGQGSTG--------MVVSRGGGEGAFASRYVYLEVFQVSSVKVRLSLQRAKDSFDNVYVGVKPGQMLLDLMMRMDSAHIKLKSLIVHNTTTTRSRLTLTAREHYERELKQQAFLMLGSLEAFGNPVGLVRGMGQ-GMQDFVKEPVLGLLKSVEDLAPEELMHGMARGAGSLLNHSVGGVANSVSLITG 441          
BLAST of mRNA_L-elsbetiae_contig7251.16117.1 vs. uniprot
Match: A0A6H5KXT8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXT8_9PHAE)

HSP 1 Score: 563 bits (1451), Expect = 2.820e-189
Identity = 307/386 (79.53%), Postives = 323/386 (83.68%), Query Frame = 0
Query:    1 AEPSPVRGGXXXXXXXGLSGEVSLKELHVFCRAVRISVVDGGLGEVVLGSLEGMSMSVAATEAEVEVKFKLGSLQIDSHMPGTSFPVLLQPVKPGDLSRGGNKCVRFTLVAAPRVKNVTYIKLASLSVEEFDLRLDEGMVRWAQGLADRVMWTLVADKRVDEMARWPLPEEAFCSPQAGRLSGERLGQSDEDHCSPTGSAGGSASSTRXXXXXXXXXXXXXGTFASRYVYLEVFQVSSVKVRLSLQRAKDSFDNVYVGVKPGQMLLDLMMRMDSAHIKLKSLIVHNATTTRSRLIITAREHYERELKQQAFLMLGSLEAFGNPVGLLRGMGQQGMQDFVKEPVLGLLKSVEDQAPEELMHGMARGAGSLLNHSVGGVANSFSLITG 386
            A P PV+ G         S EVSL+ELHVFCRAVR+SVVDG  GEVVLGSLEGMSM+VAATEAEVEVKF+LGSLQID+H+PGTSFPVLLQPV+PG    G NKCVRFTLVAAPRVKNV YIKLASL+VEEFDLRLDEGMVRWAQGLADRVMWTLVAD+R DEM +WPLP EAFCS QAG   G +    + D     GS GG   +T              G FASRYVYLEVFQVSSVKVRLSLQRAKDSFDNVYVGVKPGQMLLDLMMRMDSAHIKLKSLIVHN TTTRSRL +TAREHYERELKQQAFLMLGSLEAFGNPVGL+RGMGQ GMQDFVKEPVLGLLKSVED APEELMHGMARGAGSLLNHSVGGVANS SLITG
Sbjct:  423 ASPFPVQAGGDSAS----SEEVSLRELHVFCRAVRVSVVDGDRGEVVLGSLEGMSMNVAATEAEVEVKFELGSLQIDNHLPGTSFPVLLQPVRPG-YQGGNNKCVRFTLVAAPRVKNVAYIKLASLNVEEFDLRLDEGMVRWAQGLADRVMWTLVADRRADEMDKWPLPREAFCSSQAGHPGGGKPSGENADG----GSVGGGQGTTAMVVSRGGSE----GAFASRYVYLEVFQVSSVKVRLSLQRAKDSFDNVYVGVKPGQMLLDLMMRMDSAHIKLKSLIVHNTTTTRSRLTLTAREHYERELKQQAFLMLGSLEAFGNPVGLVRGMGQ-GMQDFVKEPVLGLLKSVEDLAPEELMHGMARGAGSLLNHSVGGVANSVSLITG 794          
BLAST of mRNA_L-elsbetiae_contig7251.16117.1 vs. uniprot
Match: A0A836C849_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C849_9STRA)

HSP 1 Score: 216 bits (549), Expect = 1.850e-58
Identity = 151/401 (37.66%), Postives = 205/401 (51.12%), Query Frame = 0
Query:   31 CRAVRISVVDGGLG-EVVLGSLEGMSMSVAATEAEVEVKFKLGSLQIDSHMPGTSFPVLLQPVKPGDLSRGGNK----CVRFTLVAAPRVKNVTYIKLASLSVEEFDLRLDEGMVRWAQGLADRVMWTLVADKRV--------------DEM--ARWPLPEEAFCSPQAGRLSGERLGQSDEDHCSPTGSAGGSASSTRXXXXXXXXXXXXXGTFASRYVYLEVFQ----------------------VSSVKVRLSLQRAKDSFDNVY--VGVKPGQMLLDLMMRMDSAHIKLKSLIVHNATTTRSRLIITAREHYERELKQQAFLMLGSLEAFGNPVGLLRGMGQQGMQDFVKEPVLGLLKSVEDQAPEELMHGMARGAGSLLNHSVGGVANSFSLITG 386
            C+ + +SV+D   G E+VL      S++  +   E++++ ++G LQID+H+P T FPVLLQPV+  D   GG K    C R  +  AP V N+ Y K  SL +   +LRL+E +V WAQ  AD+V   L  +                 DE   A W LP     +PQ  + +                +A G++S                    +RYVY  +                        +++ +VRLSLQR     + V     +   QM+LD MMRMDSAHI L S I+HN T    +L   A  HY   +KQ   LMLG+LEAFGNPVGL RG+ Q G+QDF+ EPVLGL++SVE+  PEE   G+ARG GSLL H+VGG+ANS S+I G
Sbjct: 5073 CKDIHVSVIDEAEGGEMVLA--RDASVNYFSCPTELQLQVQVGHLQIDNHLPRTPFPVLLQPVERCDDGGGGGKGGQHCARLMVRVAPHVANIVYCKALSLKLSPLELRLEESIVLWAQRFADKVRRYLQTEAAXXXXXXXXXXXXXXXDEASDAAWELPHTVLGAPQMPQQA--------------AAAAPGASS-----------------PLWARYVYFHILATXXXXXXXXXXXXXXXXXXXXXIAAFQVRLSLQRPTQGAEEVRRAPALTVTQMVLDAMMRMDSAHINLASFIMHNETIATQQLGAIAAAHYLSTVKQHVLLMLGALEAFGNPVGLFRGVSQ-GVQDFISEPVLGLVRSVEELRPEEFFAGIARGGGSLLKHTVGGMANSASMIAG 5439          
BLAST of mRNA_L-elsbetiae_contig7251.16117.1 vs. uniprot
Match: A0A7S1XZQ2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XZQ2_9STRA)

HSP 1 Score: 107 bits (268), Expect = 1.150e-22
Identity = 64/170 (37.65%), Postives = 95/170 (55.88%), Query Frame = 0
Query:  222 GTFASRYVYLEVFQVSSVKVRLSLQRAKDSFDNVYVGVKP------GQMLLDLMMRMDSAHIKLKSLIVHNATTTRSRLIITAREHYERELKQQAFLMLGSLEAFGNPVGLLRGMGQQGMQDFVKEPVLGLLKSVEDQAPEELMHGMARGAGSLLNHSVGGVANSFSLIT 385
            G  A+   Y E+ Q+  V+   S + +K    +                L+D++ RM+ A I+LK  +V +       L +   +HYERE+++    M+G+L   GNPVGL+R + ++G +DFV EP+ GLL SVE   P  L+ GM +G  SLL +SVGGVANS SL+T
Sbjct:    9 GGAAAGLKYFELLQIDRVRFWASFKNSKSGAADAAAATAAQPKSTLASTLMDIVGRMEEARIRLKPFVVKDFFGVADGLSVQLYQHYEREIRRHFLEMIGALHLLGNPVGLMRSL-REGAKDFVAEPMHGLLASVEQAKPAHLVKGMRKGTTSLLRNSVGGVANSASLLT 177          
BLAST of mRNA_L-elsbetiae_contig7251.16117.1 vs. uniprot
Match: A0A7S2F4H5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2F4H5_9STRA)

HSP 1 Score: 105 bits (262), Expect = 1.610e-22
Identity = 60/158 (37.97%), Postives = 88/158 (55.70%), Query Frame = 0
Query:  228 YVYLEVFQVSSVKVRLSLQRAKDSFDNVYVGVKPGQMLLDLMMRMDSAHIKLKSLIVHNATTTRSRLIITAREHYERELKQQAFLMLGSLEAFGNPVGLLRGMGQQGMQDFVKEPVLGLLKSVEDQAPEELMHGMARGAGSLLNHSVGGVANSFSLIT 385
            + Y+E   V +++ R+S+ R ++S  +VYVG KP ++LLD++ R+DSA   L+ L+V +       L      HY   ++Q     +GSLEA GNPVGL+RG   QG  D V EP+ GL+++VE                    H+VGGVANS + IT
Sbjct:   71 WTYVEELVVDTIRARVSVSRPRESAADVYVGFKPARLLLDVLQRIDSARFSLEPLMVRHRLIGPGELPAVVVRHYTSSVRQHLLSTVGSLEALGNPVGLVRGF-MQGASDAVAEPLEGLVRTVETAXXXXXXXXXXXXXXXXXTHTVGGVANSAAQIT 227          
BLAST of mRNA_L-elsbetiae_contig7251.16117.1 vs. uniprot
Match: A0A7R9UE31_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UE31_9STRA)

HSP 1 Score: 106 bits (265), Expect = 3.050e-21
Identity = 101/371 (27.22%), Postives = 157/371 (42.32%), Query Frame = 0
Query:   27 LHVFCRAVRISVVDGGLGEVVLGSLEGMSMSVAATEAEVEVKFKLGSLQIDSHMPGTSFPVLLQPVKPGDLSRGGN-------KCVRFTLVAAPRVKNVTYIKLASLSVEEFDLRLDEGMVRWAQGLADR--VMWTLVADKRVDEMARWPLPEEAFCSPQAGRLSGERLGQSDEDHCSPTGSAGGSASSTRXXXXXXXXXXXXXGTFASRYVYLEVFQVSSVKVRLSLQRAK-DSFDNVYVGVKPG--QMLLDLMMRMDSAHIKLKSLIVHNATTTRSRLIITAREHYERELKQQAFLMLGSLEAFGNPVGLLRGMGQQGMQDFVKEPVLGLLKSVEDQAPEELMHGMARGAGSLLNHSVGGVANSFSLIT 385
            L V    + IS+VD    E+ L +L  +   +     E     + G LQ+D+ +P +SFPV+   V   D S  G        K     L      ++  +++  S ++ E ++R+D   V  A     R  ++W                  +AF S                        AG SA S                  ++   Y E+ Q   +++ +S +    D        V P     L+D++ R+D A I+LK L+V +       L     +HYERE ++    ++G+L   GNP+GL+R   + G +DFV EP+LGL+ S+E   P  L+ G  RG  SLL +SVGGV NS SL+T
Sbjct:  549 LTVQVPTLHISIVDNVPREIALVTLSKVRYEMITNAEESRTSIRAGDLQVDNFLPFSSFPVM---VALRDRSAEGRQPTSRAFKIALGVLRGGSSPQSYVHVRQLSFTMAELEVRVDSVAVSTALEFLKRQSLVWA-----------------DAFPS------------------------AGESAKSE-----------------SADLNYFELLQADRLRMSVSYKNTSADRLRRTSRKVIPALTSALIDMVGRLDGARIRLKPLVVKDFFGPLDFLSEQVSQHYEREARRHVLELIGALHLLGNPIGLMRSF-RDGAKDFVAEPMLGLMDSIEQAKPAALVKGFKRGTTSLLKNSVGGVVNSASLLT 857          
BLAST of mRNA_L-elsbetiae_contig7251.16117.1 vs. uniprot
Match: A0A7R9WT54_9STRA (Hypothetical protein (Fragment) n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9WT54_9STRA)

HSP 1 Score: 95.1 bits (235), Expect = 3.480e-20
Identity = 53/111 (47.75%), Postives = 70/111 (63.06%), Query Frame = 0
Query:  275 AHIKLKSLIVHNATTTRSRLIITAREHYERELKQQAFLMLGSLEAFGNPVGLLRGMGQQGMQDFVKEPVLGLLKSVEDQAPEELMHGMARGAGSLLNHSVGGVANSFSLIT 385
            A +    + + N  +T  +L      HY   L+Q    +LGSL AFGNP+GL+RG+G+ GM DFV EPV GL KSV++  P  L  G+ARG GSL  H+VGG A+S SL+T
Sbjct:    1 ASLNFAGISLRNHISTTPQLSTYLLTHYMASLRQNVPALLGSLAAFGNPLGLIRGVGE-GMADFVSEPVKGLQKSVQELDPGYLFDGVARGTGSLARHTVGGFADSASLLT 110          
BLAST of mRNA_L-elsbetiae_contig7251.16117.1 vs. uniprot
Match: A0A7S2LN01_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2LN01_9STRA)

HSP 1 Score: 96.3 bits (238), Expect = 6.770e-18
Identity = 50/121 (41.32%), Postives = 76/121 (62.81%), Query Frame = 0
Query:  265 LLDLMMRMDSAHIKLKSLIVHNATTTRSRLIITAREHYERELKQQAFLMLGSLEAFGNPVGLLRGMGQQGMQDFVKEPVLGLLKSVEDQAPEELMHGMARGAGSLLNHSVGGVANSFSLIT 385
            ++D ++R + A +    + + N  T   ++      HY   L+     +LGSL AFGNP+GL+RG+G  G+ DFV EP+ GL KS+E+  P  ++ G+ARG GSL  H++GGVA+S SL+T
Sbjct:  281 IVDALLRCEEASLAFPGIGIRNYLTNSPQVTTYLLAHYLAALRSNVPSLLGSLAAFGNPLGLIRGLGD-GVSDFVSEPIKGLKKSLEELDPTFVIDGVARGTGSLARHTIGGVADSASLLT 400          
BLAST of mRNA_L-elsbetiae_contig7251.16117.1 vs. uniprot
Match: A0A7S2PQX2_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2PQX2_9STRA)

HSP 1 Score: 96.3 bits (238), Expect = 7.920e-18
Identity = 50/121 (41.32%), Postives = 76/121 (62.81%), Query Frame = 0
Query:  265 LLDLMMRMDSAHIKLKSLIVHNATTTRSRLIITAREHYERELKQQAFLMLGSLEAFGNPVGLLRGMGQQGMQDFVKEPVLGLLKSVEDQAPEELMHGMARGAGSLLNHSVGGVANSFSLIT 385
            ++D ++R + A +    + + N  T   ++      HY   L+     +LGSL AFGNP+GL+RG+G  G+ DFV EP+ GL KS+E+  P  ++ G+ARG GSL  H++GGVA+S SL+T
Sbjct:  492 IVDALLRCEEASLAFPGIGIRNYLTNSPQVTTYLLAHYLAALRSNVPSLLGSLAAFGNPLGLIRGLGD-GVSDFVSEPIKGLKKSLEELDPTFVIDGVARGTGSLARHTIGGVADSASLLT 611          
BLAST of mRNA_L-elsbetiae_contig7251.16117.1 vs. uniprot
Match: A0A7S2U5Y0_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2U5Y0_9STRA)

HSP 1 Score: 95.5 bits (236), Expect = 8.030e-18
Identity = 51/121 (42.15%), Postives = 76/121 (62.81%), Query Frame = 0
Query:  265 LLDLMMRMDSAHIKLKSLIVHNATTTRSRLIITAREHYERELKQQAFLMLGSLEAFGNPVGLLRGMGQQGMQDFVKEPVLGLLKSVEDQAPEELMHGMARGAGSLLNHSVGGVANSFSLIT 385
            L+D ++R D A +    + V N  +T  +++     HY   L+     +LGSL AFGNP+GL+RG+G  G+ DFV EPV GL +SV++  P  ++ G+ARG  SL  H++GG A+S SL+T
Sbjct:  112 LVDALLRCDGASLSFSGVGVRNHISTMPQVLTYLGAHYLDSLRSNVPALLGSLAAFGNPIGLIRGLGD-GVSDFVSEPVKGLKRSVKELDPSFVVDGVARGTESLARHTLGGFADSASLLT 231          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig7251.16117.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FMF7_ECTSI1.960e-19479.27Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KXT8_9PHAE2.820e-18979.53Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A836C849_9STRA1.850e-5837.66Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S1XZQ2_9STRA1.150e-2237.65Hypothetical protein (Fragment) n=1 Tax=Phaeomonas... [more]
A0A7S2F4H5_9STRA1.610e-2237.97Hypothetical protein (Fragment) n=1 Tax=Dictyocha ... [more]
A0A7R9UE31_9STRA3.050e-2127.22Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
A0A7R9WT54_9STRA3.480e-2047.75Hypothetical protein (Fragment) n=1 Tax=Craspedost... [more]
A0A7S2LN01_9STRA6.770e-1841.32Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]
A0A7S2PQX2_9STRA7.920e-1841.32Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]
A0A7S2U5Y0_9STRA8.030e-1842.15Hypothetical protein n=1 Tax=Attheya septentrional... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR031645Vacuolar protein sorting-associated protein 13, C-terminalPFAMPF16909VPS13_Ccoord: 229..386
e-value: 8.3E-37
score: 126.7
IPR026847Vacuolar protein sorting-associated protein 13PANTHERPTHR16166VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN VPS13coord: 59..386
NoneNo IPR availablePANTHERPTHR16166:SF93VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 13Dcoord: 59..386

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig7251contigL-elsbetiae_contig7251:416..6166 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig7251.16117.1mRNA_L-elsbetiae_contig7251.16117.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig7251 416..6166 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig7251.16117.1 ID=prot_L-elsbetiae_contig7251.16117.1|Name=mRNA_L-elsbetiae_contig7251.16117.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=386bp
AEPSPVRGGGGGAGGGGLSGEVSLKELHVFCRAVRISVVDGGLGEVVLGS
LEGMSMSVAATEAEVEVKFKLGSLQIDSHMPGTSFPVLLQPVKPGDLSRG
GNKCVRFTLVAAPRVKNVTYIKLASLSVEEFDLRLDEGMVRWAQGLADRV
MWTLVADKRVDEMARWPLPEEAFCSPQAGRLSGERLGQSDEDHCSPTGSA
GGSASSTRTRRGVSRGRGRGEGTFASRYVYLEVFQVSSVKVRLSLQRAKD
SFDNVYVGVKPGQMLLDLMMRMDSAHIKLKSLIVHNATTTRSRLIITARE
HYERELKQQAFLMLGSLEAFGNPVGLLRGMGQQGMQDFVKEPVLGLLKSV
EDQAPEELMHGMARGAGSLLNHSVGGVANSFSLITG
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR031645VPS13_C
IPR026847VPS13