prot_L-elsbetiae_contig7249.16112.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig7249.16112.1
Unique Nameprot_L-elsbetiae_contig7249.16112.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length436
Homology
BLAST of mRNA_L-elsbetiae_contig7249.16112.1 vs. uniprot
Match: D8LQ52_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LQ52_ECTSI)

HSP 1 Score: 196 bits (497), Expect = 1.680e-53
Identity = 122/263 (46.39%), Postives = 147/263 (55.89%), Query Frame = 0
Query:   21 SIPAAEQQTTGAAAAAAETLKDRDLTFDSRHP-LTFRVTGAASVARLEPLLLNHHQEDRRKGIWHRALSXXXXXXNSPASNAQLDFVWETTVTKEQHQQHRNARVLNRLNGAQVLEDKANLVLLQRLMAVPTLESYVVSGRKMVAQWAKIRFQQRNKPPDARAMPPRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCVKAAXXNGGLDIWVLHEGNWKPVTEELSDTESYVIQ 282
            S+P+          + AETL+DR+  F    P LTFRVTGA+SVARLEPLLL     ++R  IW R+L       +S     ++DFVWETTVTK+Q ++HR+ARVLNRL+GAQVLEDKANLVLLQRLM  PTLESY V+GR  VA+WA+ RF+++N P D    PP                                                            CVKAA  NGGLDIWVLH+GNWK VTE LS+ ESYVIQ
Sbjct:   36 SVPSNTNAPHRRVRSMAETLEDRN--FPPGQPTLTFRVTGASSVARLEPLLLGPGGRNQRPTIWSRSL-------DSGDDGVRVDFVWETTVTKQQQRRHRDARVLNRLSGAQVLEDKANLVLLQRLMTAPTLESYAVNGRNAVARWAQQRFKEQNLPRDRPPPPP------------STREAGYPHDDQFLARKRALVQGTSAATETTQESEAVGNGHAGEEDWWCVKAAGGNGGLDIWVLHKGNWKMVTEALSEHESYVIQ 277          
BLAST of mRNA_L-elsbetiae_contig7249.16112.1 vs. uniprot
Match: A0A835Z2B8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z2B8_9STRA)

HSP 1 Score: 92.0 bits (227), Expect = 2.610e-16
Identity = 80/225 (35.56%), Postives = 102/225 (45.33%), Query Frame = 0
Query:   53 LTFRVTGAASVARLEPLLLNHHQEDRRKGIWHRALSXXXXXXNSPASNAQLDFVWETTVTKEQHQQHRNARVLNRLNGAQVLEDKANLVLLQRLMAVPTLESYVVSGRKMVAQWAKIRFQ---QRNKPPDARAMPPRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCVKAAXXNGGLDIWVLHEGNWKPVTEELS 274
            L +RVTGA +V+R+ P+L           +     +      +SP  + +LDFV+ETTVTK+    HR A VLNRL G+ VLEDKA+  LL R MA P LES++V G   V  WAK R+      +   D                              XXXXXXXXX                           CVKAA  NGG D+WVLH GN + +  +LS
Sbjct:   11 LRYRVTGAGAVSRIRPVL-------DTDSVCREGCTVEWQEASSP--DERLDFVYETTVTKDWQAAHRGAVVLNRLCGSVVLEDKASFALLSRRMAAPALESHLVEGSSGVEAWAKARWGPLFNSSSSGDEGGSGAEGNDSSSSGAAACHRCGSREPVGDXXXXXXXXXAAGSLSSGAAAARARCRGAPPREPDWWCVKAARGNGGGDVWVLHAGNAQRLVAQLS 226          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig7249.16112.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LQ52_ECTSI1.680e-5346.39Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835Z2B8_9STRA2.610e-1635.56Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig7249contigL-elsbetiae_contig7249:3346..6283 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig7249.16112.1mRNA_L-elsbetiae_contig7249.16112.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig7249 721..6503 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig7249.16112.1 ID=prot_L-elsbetiae_contig7249.16112.1|Name=mRNA_L-elsbetiae_contig7249.16112.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=436bp
MLNKGHLVTMGRDDSLRDFPSIPAAEQQTTGAAAAAAETLKDRDLTFDSR
HPLTFRVTGAASVARLEPLLLNHHQEDRRKGIWHRALSSGGGGGNSPASN
AQLDFVWETTVTKEQHQQHRNARVLNRLNGAQVLEDKANLVLLQRLMAVP
TLESYVVSGRKMVAQWAKIRFQQRNKPPDARAMPPRPPPEGVIIDEDNSP
RRHPTTIRGAKAAVTTVVPGAVAKAAAAAAAAEVGDGGAGGEDWWCVKAA
GGNGGLDIWVLHEGNWKPVTEELSDTESYVIQVRTESLDNHQRLPPPPLS
LHANRGASRLVSDTWQDRCFGTGGSSTFGCTPSCAPTCPRGCTGQPIFCR
PAGPTPLEVTPSLTGHQERALLTSLCTSATSRSTSTQRATRDRCLVSSPP
STLICGRKCSSCCGLWSKRRRRSCSTRLTRTTSSF*
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